Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G309 Amborella trichopoda HOM05D000446 ORTHO05D000321 7.4e-33 143.3 72 100.0
ATR0796G150 Amborella trichopoda HOM05D000446 ORTHO05D000321 1.2e-27 125.9 71 87.3
ATR0681G107 Amborella trichopoda HOM05D000446 ORTHO05D000321 3.1e-15 84.7 58 72.4
FAN25G1501 Fragaria x ananassa HOM05D000446 ORTHO05D000321 1.1e-12 76.3 56 60.7
MD05G1287500 Malus domestica HOM05D000446 ORTHO05D000321 1.4e-12 75.9 59 61.0
MD10G1264800 Malus domestica HOM05D000446 ORTHO05D000321 1.9e-12 75.5 59 61.0
FAN11G0641 Fragaria x ananassa HOM05D000446 ORTHO05D000321 5.5e-12 73.9 56 58.9
FAN16G1793 Fragaria x ananassa HOM05D000446 ORTHO05D000321 5.5e-12 73.9 56 58.9
Atru.chr10.1341 Acer truncatum HOM05D000446 ORTHO05D000321 9.4e-12 73.2 50 66.0
Manes.15G119100 Manihot esculenta HOM05D000446 ORTHO05D000321 9.4e-12 73.2 55 63.6
FvH4_3g05990 Fragaria vesca HOM05D000446 ORTHO05D000321 1.2e-11 72.8 56 58.9
Manes.15G119201 Manihot esculenta HOM05D000446 ORTHO05D000321 1.2e-11 72.8 55 63.6
Potri.007G114300 Populus trichocarpa HOM05D000446 ORTHO05D000321 1.2e-11 72.8 55 61.8
FAN21G0408 Fragaria x ananassa HOM05D000446 ORTHO05D000321 1.6e-11 72.4 51 62.7
TAR365G0292 Trochodendron aralioides HOM05D000446 ORTHO05D000321 2.7e-11 71.6 64 56.2
PGR042G2425 Punica granatum HOM05D000446 ORTHO05D000321 3.6e-11 71.2 50 68.0
QL03p042217 Quercus lobata HOM05D000446 ORTHO05D000321 3.6e-11 71.2 63 52.4
QL03p042286 Quercus lobata HOM05D000446 ORTHO05D000321 3.6e-11 71.2 50 64.0
Sabra07G0093200 Salix brachista HOM05D000446 ORTHO05D000321 3.6e-11 71.2 55 58.2
ClCG01G024420 Citrullus lanatus HOM05D000446 ORTHO05D000321 6.1e-11 70.5 68 50.0
ClCG01G024460 Citrullus lanatus HOM05D000446 ORTHO05D000321 6.1e-11 70.5 68 50.0
Lj2A308T38 Lonicera japonica HOM05D000446 ORTHO05D000321 6.1e-11 70.5 50 56.0
Peaxi162Scf01623g00010 Petunia axillaris HOM05D000446 ORTHO05D000321 6.1e-11 70.5 50 60.0
RcHm_v2.0_Chr5g0013421 Rosa chinensis HOM05D000446 ORTHO05D000321 6.1e-11 70.5 51 60.8
Prupe.4G077200 Prunus persica HOM05D000446 ORTHO05D000321 7.9e-11 70.1 50 64.0
Migut.M00931 Erythranthe guttata HOM05D000446 ORTHO05D000321 1.0e-10 69.7 50 60.0
QL03p042377 Quercus lobata HOM05D000446 ORTHO05D000321 1.0e-10 69.7 50 58.0
QL03p042477 Quercus lobata HOM05D000446 ORTHO05D000321 1.0e-10 69.7 50 58.0
QL03p042587 Quercus lobata HOM05D000446 ORTHO05D000321 1.0e-10 69.7 50 58.0
Sed0022494 Sechium edule HOM05D000446 ORTHO05D000321 1.0e-10 69.7 50 62.0
MELO3C007150.2 Cucumis melo HOM05D000446 ORTHO05D000321 1.4e-10 69.3 50 60.0
Nn8g39592 Nelumbo nucifera HOM05D000446 ORTHO05D000321 1.4e-10 69.3 50 60.0
Sed0005834 Sechium edule HOM05D000446 ORTHO05D000321 1.4e-10 69.3 59 52.5
MBI19_g32716_MAGBIO Magnolia biondii HOM05D000446 ORTHO05D000321 1.8e-10 68.9 54 57.4
Eucgr.B01815 Eucalyptus grandis HOM05D000446 ORTHO05D000321 2.3e-10 68.6 50 64.0
QL03p042425 Quercus lobata HOM05D000446 ORTHO05D000321 2.3e-10 68.6 50 58.0
QL03p042533 Quercus lobata HOM05D000446 ORTHO05D000321 2.3e-10 68.6 50 58.0
Ciclev10018262m.g Citrus clementina HOM05D000446 ORTHO05D000321 3.0e-10 68.2 56 57.1
MBI18_g09622_MAGBIO Magnolia biondii HOM05D000446 ORTHO05D000321 3.0e-10 68.2 54 55.6
Nn2g15115 Nelumbo nucifera HOM05D000446 ORTHO05D000321 3.9e-10 67.8 50 62.0
Ciclev10014325m.g Citrus clementina HOM05D000446 ORTHO05D000321 5.1e-10 67.4 56 55.4
QL05p016178 Quercus lobata HOM05D000446 ORTHO05D000321 5.1e-10 67.4 50 60.0
ATR0737G063 Amborella trichopoda HOM05D000446 ORTHO05D000321 6.7e-10 67.0 51 58.8
DCAR_003937 Daucus carota HOM05D000446 ORTHO05D000321 6.7e-10 67.0 50 56.0
QL03p042327 Quercus lobata HOM05D000446 ORTHO05D000321 6.7e-10 67.0 50 56.0
QL03p042655 Quercus lobata HOM05D000446 ORTHO05D000321 6.7e-10 67.0 50 56.0
CsaV3_6G051570 Cucumis sativus L. HOM05D000446 ORTHO05D000321 1.1e-09 66.2 50 58.0
Nitab4.5_0000733g0140 Nicotiana tabacum HOM05D000446 ORTHO05D000321 1.5e-09 65.9 50 54.0
Thecc.10G004600 Theobroma cacao HOM05D000446 ORTHO05D000321 1.5e-09 65.9 50 58.0
Ciclev10017977m.g Citrus clementina HOM05D000446 ORTHO05D000321 2.0e-09 65.5 48 60.4
Potri.001G354250 Populus trichocarpa HOM05D000446 ORTHO05D000321 2.0e-09 65.5 50 56.0
GSVIVG01017658001 Vitis vinifera HOM05D000446 ORTHO05D000321 2.5e-09 65.1 50 62.0
Oeu001045.1 Olea europaea HOM05D000446 ORTHO05D000321 3.3e-09 64.7 50 52.0
TWI59G0340 Tripterygium wilfordii HOM05D000446 ORTHO05D000321 3.3e-09 64.7 50 56.0
COL.COLO4_33497 Corchorus olitorius HOM05D000446 ORTHO05D000321 5.7e-09 63.9 49 59.2
DCAR_006662 Daucus carota HOM05D000446 ORTHO05D000321 5.7e-09 63.9 50 54.0
THA.LOC104827110 Tarenaya hassleriana HOM05D000446 ORTHO05D000321 5.7e-09 63.9 50 56.0
Cc09_g08970 Coffea canephora HOM05D000446 ORTHO05D000321 9.7e-09 63.2 70 41.4
Cc10_g05830 Coffea canephora HOM05D000446 ORTHO05D000321 9.7e-09 63.2 50 56.0
GSVIVG01017660001 Vitis vinifera HOM05D000446 ORTHO05D000321 9.7e-09 63.2 50 56.0
Ciclev10018058m.g Citrus clementina HOM05D000446 ORTHO05D000321 1.7e-08 62.4 50 56.0
COL.COLO4_29426 Corchorus olitorius HOM05D000446 ORTHO05D000321 1.7e-08 62.4 49 55.1
Manes.04G053290 Manihot esculenta HOM05D000446 ORTHO05D000321 1.7e-08 62.4 50 56.0
Thecc.04G312200 Theobroma cacao HOM05D000446 ORTHO05D000321 1.7e-08 62.4 48 54.2
THA.LOC104818855 Tarenaya hassleriana HOM05D000446 ORTHO05D000321 2.2e-08 62.0 48 54.2
Aqoxy4G00713_Aqoxy4G00714 Aquilegia oxysepala HOM05D000446 ORTHO05D000321 3.7e-08 61.2 48 54.2
TAR362G1089 Trochodendron aralioides HOM05D000446 ORTHO05D000321 3.7e-08 61.2 50 56.0
Cc10_g05820 Coffea canephora HOM05D000446 ORTHO05D000321 4.8e-08 60.8 49 51.0
Thecc.04G310800 Theobroma cacao HOM05D000446 ORTHO05D000321 4.8e-08 60.8 49 51.0
COL.COLO4_25847 Corchorus olitorius HOM05D000446 ORTHO05D000321 6.3e-08 60.5 50 50.0
SEGI_18691 Sequoiadendron giganteum HOM05D000446 ORTHO05D000321 8.2e-08 60.1 50 50.0
COL.COLO4_02915 Corchorus olitorius HOM05D000446 ORTHO05D000321 1.1e-07 59.7 49 49.0
COL.COLO4_19314 Corchorus olitorius HOM05D000446 ORTHO05D000321 1.1e-07 59.7 52 46.2
HPP92_001186 Vanilla planifolia HOM05D000446 ORTHO05D000321 1.1e-07 59.7 50 54.0
HPP92_003529 Vanilla planifolia HOM05D000446 ORTHO05D000321 1.1e-07 59.7 50 48.0
Zm00001eb339760 Zea mays HOM05D000446 ORTHO05D000321 1.4e-07 59.3 50 50.0
TWI09G0321 Tripterygium wilfordii HOM05D000446 ORTHO05D000321 1.8e-07 58.9 50 54.0
TWI63G0900 Tripterygium wilfordii HOM05D000446 ORTHO05D000321 1.8e-07 58.9 50 54.0
HPP92_016336 Vanilla planifolia HOM05D000446 ORTHO05D000321 2.4e-07 58.5 50 52.0
Aqoxy1G04288 Aquilegia oxysepala HOM05D000446 ORTHO05D000321 3.1e-07 58.2 65 44.6
Duzib128G0259 Durio zibethinus HOM05D000446 ORTHO05D000321 4.1e-07 57.8 41 61.0
Thecc.10G004800 Theobroma cacao HOM05D000446 ORTHO05D000321 4.1e-07 57.8 50 52.0
HPP92_016415 Vanilla planifolia HOM05D000446 ORTHO05D000321 5.3e-07 57.4 50 50.0
SEGI_36075 Sequoiadendron giganteum HOM05D000446 ORTHO05D000321 1.2e-06 56.2 50 52.0
Cpa.g.sc166.29 Carica papaya HOM05D000446 ORTHO05D000321 2.0e-06 55.5 50 48.0
Ciclev10014315m.g Citrus clementina HOM05D000446 ORTHO05D000321 2.0e-06 55.5 50 48.0
Ah.09g231840 Amaranthus hybridus HOM05D000446 ORTHO05D000321 2.6e-06 55.1 55 52.7
Duzib114G0246 Durio zibethinus HOM05D000446 ORTHO05D000321 2.6e-06 55.1 41 61.0
Aqoxy1G04289 Aquilegia oxysepala HOM05D000446 ORTHO05D000321 3.4e-06 54.7 52 50.0
Duzib151G0382 Durio zibethinus HOM05D000446 ORTHO05D000321 4.5e-06 54.3 39 61.5
Duzib212G0190 Durio zibethinus HOM05D000446 ORTHO05D000321 4.5e-06 54.3 40 60.0
GSVIVG01017659001 Vitis vinifera HOM05D000446 ORTHO05D000321 4.5e-06 54.3 42 54.8
PGR042G1288 Punica granatum HOM05D000446 ORTHO05D000321 5.9e-06 53.9 37 70.3
Cpa.g.sc166.31 Carica papaya HOM05D000446 ORTHO05D000321 7.7e-06 53.5 64 43.8
Cpa.g.sc489.8 Carica papaya HOM05D000446 ORTHO05D000321 7.7e-06 53.5 64 43.8
Zm00001eb388370 Zea mays HOM05D000446 ORTHO05D000321 7.7e-06 53.5 59 44.1


User provided reference genes

Program Settings