Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 6.0e-141 504.2 265 100.0
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 1.7e-106 389.8 264 78.4
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 4.5e-104 381.7 267 77.9
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 1.7e-103 379.8 267 77.5
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 2.2e-103 379.4 267 77.5
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 7.2e-102 374.4 267 77.2
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 4.7e-101 371.7 267 76.0
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 1.8e-100 369.8 268 75.7
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 4.4e-99 365.2 268 75.0
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 1.7e-98 363.2 267 75.3
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 2.2e-98 362.8 268 76.1
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 1.8e-97 359.8 270 75.6
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 9.1e-97 357.5 272 71.7
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.2e-96 357.1 265 74.3
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 2.3e-95 352.8 270 72.2
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 1.9e-94 349.7 269 73.2
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 2.5e-94 349.4 268 72.0
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 4.2e-94 348.6 299 68.6
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.2e-93 347.1 267 71.2
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 1.0e-92 344.0 247 75.3
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 1.0e-92 344.0 280 67.5
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 1.4e-92 343.6 280 70.0
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.8e-92 343.2 278 69.8
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 2.3e-92 342.8 274 69.0
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.3e-92 342.8 287 67.2
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 2.0e-91 339.7 253 73.5
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 4.4e-91 338.6 279 68.5
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 4.4e-91 338.6 287 66.2
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 9.8e-91 337.4 250 74.4
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 1.3e-90 337.0 249 74.7
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 1.7e-90 336.7 274 67.5
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 2.8e-90 335.9 250 74.0
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 6.3e-90 334.7 249 73.9
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 2.4e-89 332.8 243 72.8
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 2.4e-89 332.8 243 72.8
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 4.1e-89 332.0 243 73.3
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 9.2e-89 330.9 243 72.4
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 9.2e-89 330.9 293 65.2
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 9.2e-89 330.9 243 73.3
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 9.2e-89 330.9 279 65.9
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 1.6e-88 330.1 299 63.9
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.0e-88 329.7 280 67.9
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 2.7e-88 329.3 244 71.3
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 3.5e-88 328.9 269 67.7
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 3.5e-88 328.9 246 72.4
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 3.5e-88 328.9 242 71.5
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 4.5e-88 328.6 249 72.7
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 7.8e-88 327.8 286 65.4
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 1.0e-87 327.4 242 71.5
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.3e-87 326.2 278 65.8
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 2.9e-87 325.9 286 65.0
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 5.0e-87 325.1 264 66.7
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 5.0e-87 325.1 287 63.4
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 8.6e-87 324.3 283 65.4
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.5e-86 323.6 246 71.1
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.9e-86 323.2 279 64.9
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 1.9e-86 323.2 278 66.2
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.9e-86 323.2 273 65.6
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 3.3e-86 322.4 300 62.3
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 5.6e-86 321.6 252 71.4
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 7.3e-86 321.2 267 67.4
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.2e-85 320.5 301 62.5
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 2.1e-85 319.7 247 70.0
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 2.1e-85 319.7 280 65.7
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 4.7e-85 318.5 283 65.0
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 8.0e-85 317.8 306 62.7
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 8.0e-85 317.8 269 67.3
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.0e-84 317.4 298 62.4
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.8e-84 316.6 286 62.6
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 8.9e-84 314.3 275 66.9
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 2.6e-83 312.8 280 63.2
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 1.7e-82 310.1 301 60.5
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 3.7e-82 308.9 264 64.4
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 8.3e-82 307.8 211 77.7
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 1.1e-81 307.4 285 61.1
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.1e-81 307.4 274 64.2
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.1e-81 307.4 274 64.2
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 1.1e-81 307.4 292 61.6
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.2e-81 305.8 270 64.4
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 7.0e-81 304.7 268 66.4
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 4.6e-80 302.0 275 65.5
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 7.8e-80 301.2 322 56.8
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.7e-79 300.1 299 59.5
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.9e-79 298.9 274 63.1
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.9e-79 298.9 274 63.1
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 1.1e-78 297.4 271 62.0
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 1.1e-78 297.4 213 74.6
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 1.2e-77 293.9 307 59.0
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.1e-77 293.1 299 58.5
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.6e-75 286.2 279 58.1
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 4.4e-75 285.4 283 60.8
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 2.9e-74 282.7 262 63.0
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 2.9e-74 282.7 277 59.9
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 8.3e-74 281.2 270 64.1
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.4e-73 279.6 273 60.1
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 4.1e-73 278.9 271 62.4
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.4e-68 263.8 180 77.8
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.4e-65 253.8 174 77.0
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 4.1e-65 252.3 390 44.4
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.6e-64 250.4 174 78.7
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 3.9e-63 245.7 272 55.1
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 2.5e-62 243.0 280 56.4
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 3.3e-54 216.1 208 61.1
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 8.4e-50 201.4 157 72.0
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 4.2e-49 199.1 134 79.1
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 1.6e-45 187.2 158 66.5
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 2.4e-44 183.3 136 75.7
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 1.9e-38 163.7 134 67.2
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 2.5e-38 163.3 182 56.0
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.4e-33 147.5 131 61.8
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.0e-31 141.4 161 54.0
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 4.5e-27 125.9 77 80.5
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 2.9e-26 123.2 133 57.9
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 3.2e-25 119.8 94 72.3
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.0e-18 98.2 106 57.5
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.9e-18 96.7 110 56.4
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 7.2e-17 92.0 200 33.5
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 1.8e-07 60.8 72 52.8
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 2.3e-07 60.5 42 71.4
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 3.0e-07 60.1 102 46.1


User provided reference genes

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