Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 0.0e+00 1663.3 853 100.0
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 8.4e-285 983.8 859 62.3
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 4.3e-265 918.3 863 58.9
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 6.5e-261 904.4 861 58.5
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 7.9e-259 897.5 854 58.5
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 5.1e-258 894.8 856 57.1
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 3.7e-256 888.6 857 56.8
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 3.7e-256 888.6 851 56.4
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 4.8e-256 888.3 857 56.7
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 4.8e-256 888.3 855 56.8
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 8.2e-256 887.5 855 57.7
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 1.1e-255 887.1 853 57.6
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 1.4e-255 886.7 851 57.2
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 4.1e-255 885.2 855 56.3
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 5.3e-255 884.8 855 57.7
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 9.0e-255 884.0 893 55.5
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 4.5e-254 881.7 852 56.0
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 4.5e-254 881.7 856 56.8
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 7.7e-254 880.9 865 57.2
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 1.7e-253 879.8 852 56.9
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 2.2e-253 879.4 852 57.0
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 1.9e-252 876.3 846 56.9
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 7.2e-252 874.4 852 56.6
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 1.2e-251 873.6 852 56.8
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 1.2e-251 873.6 856 56.4
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 2.7e-251 872.5 856 56.8
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 4.6e-251 871.7 852 56.6
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 7.9e-251 870.9 851 56.5
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 1.8e-250 869.8 855 55.3
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 6.7e-250 867.8 853 56.0
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 1.5e-249 866.7 855 57.0
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 2.0e-249 866.3 848 56.0
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 7.4e-249 864.4 856 55.8
Atru.chr6.2773 Acer truncatum HOM05D006510 ORTHO05D008171 9.7e-249 864.0 820 57.9
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 1.7e-248 863.2 845 56.1
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 4.8e-248 861.7 851 55.8
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 4.8e-248 861.7 848 56.1
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 1.4e-247 860.1 854 56.0
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 1.8e-247 859.8 857 55.9
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 4.1e-247 858.6 853 56.5
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 6.9e-247 857.8 854 56.0
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 2.6e-246 855.9 854 55.7
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 3.4e-246 855.5 853 55.6
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 3.4e-246 855.5 856 55.6
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 1.0e-245 854.0 853 56.2
MELO3C002806.2 Cucumis melo HOM05D006510 ORTHO05D008171 3.8e-245 852.0 860 54.7
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 1.9e-244 849.7 852 55.0
MD11G1004500 Malus domestica HOM05D006510 ORTHO05D008171 4.2e-244 848.6 854 55.5
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 7.2e-244 847.8 864 55.3
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 7.2e-244 847.8 852 55.5
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 1.2e-243 847.0 853 55.7
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 1.6e-243 846.7 854 55.3
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 3.6e-243 845.5 851 55.8
CsaV3_1G037360 Cucumis sativus L. HOM05D006510 ORTHO05D008171 6.1e-243 844.7 858 54.7
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 2.3e-242 842.8 819 56.5
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 5.1e-242 841.6 859 54.7
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 4.4e-241 838.6 850 54.5
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 1.7e-240 836.6 850 54.0
Manes.07G057100 Manihot esculenta HOM05D006510 ORTHO05D008171 4.8e-240 835.1 853 54.4
Sed0011358 Sechium edule HOM05D006510 ORTHO05D008171 8.2e-240 834.3 859 53.9
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 2.0e-238 829.7 847 53.6
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 2.0e-238 829.7 861 54.9
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 7.7e-238 827.8 813 56.0
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 1.4e-236 823.5 852 54.2
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 3.2e-236 822.4 853 54.0
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 3.6e-235 818.9 858 54.1
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 3.0e-234 815.8 851 52.8
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 1.5e-233 813.5 855 53.1
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 2.2e-232 809.7 859 53.1
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 1.2e-230 803.9 865 52.9
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 2.5e-228 796.2 862 51.9
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 4.2e-228 795.4 863 52.1
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 2.7e-227 792.7 865 52.3
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 6.1e-227 791.6 864 51.7
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 6.1e-227 791.6 857 51.7
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 8.0e-227 791.2 862 51.6
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 1.3e-224 783.9 899 50.4
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 8.3e-224 781.2 853 52.3
Oeu001793.2 Olea europaea HOM05D006510 ORTHO05D008171 2.4e-223 779.6 808 53.6
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 1.6e-222 776.9 851 51.2
BraA05t19323Z Brassica rapa HOM05D006510 ORTHO05D008171 2.7e-222 776.2 864 51.3
C04p03920 Brassica napus HOM05D006510 ORTHO05D008171 7.7e-222 774.6 864 51.3
Sc12g0003550 Simmondsia chinensis HOM05D006510 ORTHO05D008171 1.0e-221 774.2 807 53.4
A05p03350 Brassica napus HOM05D006510 ORTHO05D008171 2.2e-221 773.1 862 51.3
HPP92_014652 Vanilla planifolia HOM05D006510 ORTHO05D008171 5.0e-221 771.9 844 52.7
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 1.9e-220 770.0 849 51.7
Lsat_1_v5_gn_4_64481 Lactuca sativa HOM05D006510 ORTHO05D008171 1.6e-214 750.4 851 49.8
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 8.6e-213 744.6 806 52.1
BolC4t22028H Brassica oleracea HOM05D006510 ORTHO05D008171 2.8e-208 729.6 822 50.9
Hma1.2p1_0178F.1_g078700 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 1.4e-207 727.2 829 51.9
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 2.3e-205 719.9 861 46.7
FAN09G2536 Fragaria x ananassa HOM05D006510 ORTHO05D008171 5.0e-205 718.8 755 53.5
VMungo1127G1883 Vigna mungo HOM05D006510 ORTHO05D008171 6.6e-205 718.4 758 54.0
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 1.4e-202 710.7 848 48.9
Zm00001eb297610 Zea mays HOM05D006510 ORTHO05D008171 1.2e-190 671.0 755 49.0
SEGI_27047 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 3.6e-187 659.4 727 51.3
arahy.Tifrunner.gnm1.ann1.H5IL2E Arachis hypogaea HOM05D006510 ORTHO05D008171 2.1e-179 633.6 648 54.6
Dinv07684 Davidia involucrata HOM05D006510 ORTHO05D008171 9.9e-169 598.2 691 50.7
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 1.7e-168 597.4 815 45.2
TAR629G2876 Trochodendron aralioides HOM05D006510 ORTHO05D008171 3.4e-145 520.0 524 55.2
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 3.8e-136 490.0 821 37.5
Pp3c9_21860 Physcomitrium patens HOM05D006510 ORTHO05D008171 1.9e-135 487.6 853 37.7
SMO164G0050 Selaginella moellendorffii HOM05D006510 ORTHO05D008171 5.1e-133 479.6 842 38.2
SalBow7G4578 Salvia bowleyana HOM05D006510 ORTHO05D008171 8.5e-112 409.1 426 51.2
CBR_g35046 Chara braunii HOM05D006510 ORTHO05D008171 5.0e-96 356.7 982 31.9
Cpa.g.sc52.162 Carica papaya HOM05D006510 ORTHO05D008171 7.0e-82 309.7 322 55.0
Cpa.g.sc52.161 Carica papaya HOM05D006510 ORTHO05D008171 2.1e-33 148.7 174 48.3
TAR629G0105 Trochodendron aralioides HOM05D006510 ORTHO05D008171 7.2e-26 123.6 88 70.5
Cre11.g479200 Chlamydomonas reinhardtii HOM05D006510 ORTHO05D008171 6.3e-22 110.5 566 23.1
Dinv07685 Davidia involucrata HOM05D006510 ORTHO05D008171 2.9e-19 101.7 84 65.5
MCO09G591 Micromonas commoda HOM05D006510 ORTHO05D008171 4.5e-12 77.8 371 24.8
Solyc01g011180.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 2.9e-11 75.1 58 70.7
Solyc01g011190.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 1.4e-10 72.8 58 65.5
VMungo1127G1894 Vigna mungo HOM05D006510 ORTHO05D008171 1.9e-10 72.4 48 70.8
Cpa.g.c45723 Carica papaya HOM05D006510 ORTHO05D008171 1.4e-08 66.2 47 63.8
PRCOL_00003865 Prasinoderma coloniale HOM05D006510 ORTHO05D008171 1.8e-08 65.9 602 23.4
arahy.Tifrunner.gnm1.ann1.JPYC3C Arachis hypogaea HOM05D006510 ORTHO05D008171 2.3e-08 65.5 45 66.7
unitig_46.g18270 Utricularia gibba HOM05D006510 ORTHO05D008171 5.1e-08 64.3 48 60.4
HanXRQChr09g0251831 Helianthus annuus HOM05D006510 ORTHO05D008171 6.7e-08 63.9 64 50.0
SEGI_32298 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 8.8e-08 63.5 61 55.7
Hund07777 Selenicereus undatus HOM05D006510 ORTHO05D008171 7.4e-07 60.5 57 52.6
BraA03t11594Z Brassica rapa HOM05D006510 ORTHO05D008171 4.8e-06 57.8 99 40.4


User provided reference genes

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