Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G253 Amborella trichopoda HOM05D006675 ORTHO05D008302 3.2e-101 371.7 180 100.0
MELO3C013816.2 Cucumis melo HOM05D006675 ORTHO05D008302 8.4e-86 320.5 180 83.9
Sed0011153 Sechium edule HOM05D006675 ORTHO05D008302 8.4e-86 320.5 180 84.4
CiPaw.12G069400 Carya illinoinensis HOM05D006675 ORTHO05D008302 1.1e-85 320.1 178 83.1
CsaV3_3G001280 Cucumis sativus L. HOM05D006675 ORTHO05D008302 1.4e-85 319.7 180 83.3
Duzib205G0370 Durio zibethinus HOM05D006675 ORTHO05D008302 2.4e-85 318.9 180 82.8
QL12p001835 Quercus lobata HOM05D006675 ORTHO05D008302 4.2e-85 318.2 178 82.6
COL.COLO4_16920 Corchorus olitorius HOM05D006675 ORTHO05D008302 7.1e-85 317.4 180 83.3
Thecc.03G311400 Theobroma cacao HOM05D006675 ORTHO05D008302 9.3e-85 317.0 180 81.7
Aqoxy5G00552 Aquilegia oxysepala HOM05D006675 ORTHO05D008302 1.2e-84 316.6 180 82.8
Cfa009033 Carpinus fangiana HOM05D006675 ORTHO05D008302 1.2e-84 316.6 178 83.1
Lj2g0021996 Lotus japonicus HOM05D006675 ORTHO05D008302 1.6e-84 316.2 180 80.0
Haze_12062 Corylus avellana HOM05D006675 ORTHO05D008302 6.0e-84 314.3 178 82.6
HPP92_023365 Vanilla planifolia HOM05D006675 ORTHO05D008302 1.0e-83 313.5 180 80.6
Manes.01G194600 Manihot esculenta HOM05D006675 ORTHO05D008302 1.3e-83 313.2 180 81.7
TWI60G1033 Tripterygium wilfordii HOM05D006675 ORTHO05D008302 1.3e-83 313.2 178 81.5
GSVIVG01013027001 Vitis vinifera HOM05D006675 ORTHO05D008302 1.3e-83 313.2 178 82.6
Duzib068G1343 Durio zibethinus HOM05D006675 ORTHO05D008302 1.8e-83 312.8 180 81.7
Potri.001G135700 Populus trichocarpa HOM05D006675 ORTHO05D008302 1.8e-83 312.8 180 82.2
Phvul.002G134300 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 2.3e-83 312.4 180 80.0
CSS0012354 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 5.1e-83 311.2 180 81.1
CSS0042811 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 5.1e-83 311.2 180 81.1
Medtr5g028000 Medicago truncatula HOM05D006675 ORTHO05D008302 5.1e-83 311.2 180 80.6
THA.LOC104806177 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 6.7e-83 310.8 180 80.0
AT4G19003 Arabidopsis thaliana HOM05D006675 ORTHO05D008302 8.7e-83 310.5 180 80.0
CANSAT21G2314 Cannabis sativa HOM05D006675 ORTHO05D008302 1.1e-82 310.1 178 79.2
Ciclev10002637m.g Citrus clementina HOM05D006675 ORTHO05D008302 1.1e-82 310.1 180 81.1
VMungo1215G1847 Vigna mungo HOM05D006675 ORTHO05D008302 1.1e-82 310.1 178 79.8
BraA01t01049Z Brassica rapa HOM05D006675 ORTHO05D008302 1.5e-82 309.7 180 78.9
Atru.chr3.2397 Acer truncatum HOM05D006675 ORTHO05D008302 1.9e-82 309.3 178 82.0
Cc08_g03740 Coffea canephora HOM05D006675 ORTHO05D008302 1.9e-82 309.3 178 80.9
Gohir.D03G176700 Gossypium hirsutum HOM05D006675 ORTHO05D008302 1.9e-82 309.3 180 79.4
RcHm_v2.0_Chr7g0212211 Rosa chinensis HOM05D006675 ORTHO05D008302 1.9e-82 309.3 178 80.3
BcaNung04023 Brassica carinata HOM05D006675 ORTHO05D008302 2.5e-82 308.9 180 79.4
Lalb_Chr16g0380971 Lupinus albus HOM05D006675 ORTHO05D008302 2.5e-82 308.9 178 78.7
SalBow8G0964 Salvia bowleyana HOM05D006675 ORTHO05D008302 2.5e-82 308.9 178 79.2
AL7G35150 Arabidopsis lyrata HOM05D006675 ORTHO05D008302 3.3e-82 308.5 180 80.0
Carub.0007s2216 Capsella rubella HOM05D006675 ORTHO05D008302 3.3e-82 308.5 180 79.4
Glyma.09G209600 Glycine max HOM05D006675 ORTHO05D008302 3.3e-82 308.5 178 79.2
PSO170G4469 Papaver somniferum HOM05D006675 ORTHO05D008302 3.3e-82 308.5 180 79.4
CAN.G773.29 Capsicum annuum HOM05D006675 ORTHO05D008302 5.6e-82 307.8 178 79.8
Sp7g17730 Schrenkiella parvula HOM05D006675 ORTHO05D008302 5.6e-82 307.8 180 78.9
THA.LOC104798450 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 5.6e-82 307.8 180 80.0
BcaC09g51446 Brassica carinata HOM05D000169 ORTHO05D008302 9.6e-82 307.0 180 78.3
BolC1t01279H Brassica oleracea HOM05D000169 ORTHO05D000542 9.6e-82 307.0 180 78.3
Gohir.A03G000027 Gossypium hirsutum HOM05D006675 ORTHO05D008302 9.6e-82 307.0 180 79.4
C01p13040 Brassica napus HOM05D000169 ORTHO05D000542 1.6e-81 306.2 180 78.3
Thhalv10026368m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 1.6e-81 306.2 180 78.3
HanXRQChr12g0362191 Helianthus annuus HOM05D006675 ORTHO05D008302 2.1e-81 305.8 180 78.3
Sc10g0009260 Simmondsia chinensis HOM05D006675 ORTHO05D008302 2.1e-81 305.8 180 78.3
Solyc08g076130.3 Solanum lycopersicum HOM05D006675 ORTHO05D008302 2.8e-81 305.4 180 78.9
Sopen08g024770 Solanum pennellii HOM05D006675 ORTHO05D008302 2.8e-81 305.4 180 78.9
PGSC0003DMG400003501 Solanum tuberosum HOM05D006675 ORTHO05D008302 2.8e-81 305.4 178 79.2
Nn1g09734 Nelumbo nucifera HOM05D006675 ORTHO05D008302 3.7e-81 305.1 178 80.9
FAN18G0120 Fragaria x ananassa HOM05D006675 ORTHO05D008302 6.2e-81 304.3 178 79.2
PGR042G1238 Punica granatum HOM05D006675 ORTHO05D008302 6.2e-81 304.3 178 79.8
CARHR225840 Cardamine hirsuta HOM05D006675 ORTHO05D008302 8.1e-81 303.9 180 77.8
PGSC0003DMG400009297 Solanum tuberosum HOM05D006675 ORTHO05D008302 8.1e-81 303.9 178 79.2
MSTRG.1795 Avicennia marina HOM05D006675 ORTHO05D008302 1.1e-80 303.5 178 77.5
DCAR_024956 Daucus carota HOM05D006675 ORTHO05D008302 1.1e-80 303.5 179 78.2
MD11G1243800 Malus domestica HOM05D006675 ORTHO05D008302 1.1e-80 303.5 179 78.8
FvH4_5g23270 Fragaria vesca HOM05D006675 ORTHO05D008302 1.8e-80 302.8 178 78.7
FAN18G2874 Fragaria x ananassa HOM05D006675 ORTHO05D008302 1.8e-80 302.8 178 78.7
Migut.E01322 Erythranthe guttata HOM05D006675 ORTHO05D008302 6.9e-80 300.8 178 77.5
Prupe.4G182100 Prunus persica HOM05D006675 ORTHO05D008302 6.9e-80 300.8 181 78.5
Glyma.01G011400 Glycine max HOM05D006675 ORTHO05D008302 9.0e-80 300.4 178 77.5
PSO017G0801 Papaver somniferum HOM05D006675 ORTHO05D008302 1.2e-79 300.1 180 78.3
Aa31LG6G1700 Aethionema arabicum HOM05D006675 ORTHO05D008302 1.5e-79 299.7 179 78.8
SEGI_13659 Sequoiadendron giganteum HOM05D006675 ORTHO05D008302 5.8e-79 297.7 175 79.4
ECA233G1922 Erigeron canadensis HOM05D006675 ORTHO05D008302 2.2e-78 295.8 180 75.0
Lj8A133G65 Lonicera japonica HOM05D006675 ORTHO05D008302 8.4e-78 293.9 199 71.4
Zm00001eb157890 Zea mays HOM05D006675 ORTHO05D008302 1.2e-76 290.0 180 76.7
Actinidia01330 Actinidia chinensis HOM05D006675 ORTHO05D008302 3.5e-76 288.5 165 80.6
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 1.0e-75 287.0 203 67.5
Rhsim06G0208000 Rhododendron simsii HOM05D006675 ORTHO05D008302 1.8e-75 286.2 204 69.1
HanXRQChr14g0430781 Helianthus annuus HOM05D006675 ORTHO05D008302 1.1e-74 283.5 187 70.6
Eucgr.E01313 Eucalyptus grandis HOM05D006675 ORTHO05D008302 3.3e-74 282.0 177 76.8
Eucgr.E01319 Eucalyptus grandis HOM05D006675 ORTHO05D008302 1.6e-73 279.6 176 76.7
CDE02G0997 Ceratophyllum demersum HOM05D006675 ORTHO05D008302 6.3e-73 277.7 180 73.3
Mapoly0004s0185 Marchantia polymorpha HOM05D006675 ORTHO05D008302 1.4e-72 276.6 175 70.3
Oeu017091.1 Olea europaea HOM05D006675 ORTHO05D008302 1.8e-72 276.2 158 82.3
SMO364G0912 Selaginella moellendorffii HOM05D006675 ORTHO05D008302 2.6e-71 272.3 176 69.9
AUR62007364 Chenopodium quinoa HOM05D006675 ORTHO05D008302 4.5e-71 271.6 160 80.0
Ca_25161_v3 Cicer arietinum L. HOM05D006675 ORTHO05D000003 7.6e-71 270.8 160 78.1
Peaxi162Scf00052g00336 Petunia axillaris HOM05D006675 ORTHO05D008302 3.8e-70 268.5 157 78.3
SGA_v2.0_scaffold8G04421 Striga asiatica HOM05D006675 ORTHO05D008302 4.2e-69 265.0 159 76.7
Dinv06918 Davidia involucrata HOM05D006675 ORTHO05D008302 5.5e-69 264.6 159 78.6
ClCG06G010630 Citrullus lanatus HOM05D006675 ORTHO05D008302 1.6e-68 263.1 172 76.2
Pp3c15_1420 Physcomitrium patens HOM05D006675 ORTHO05D008302 3.6e-68 261.9 175 67.4
Thhalv10015765m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 2.3e-67 259.2 167 73.1
Lsat_1_v5_gn_9_15400 Lactuca sativa HOM05D006675 ORTHO05D008302 3.0e-67 258.8 154 76.0
EL10Ac5g11997 Beta vulgaris HOM05D006675 ORTHO05D008302 3.3e-66 255.4 161 75.2
Nitab4.5_0002897g0050 Nicotiana tabacum HOM05D006675 ORTHO05D008302 7.4e-66 254.2 178 67.4
unitig_61.g26418 Utricularia gibba HOM05D006675 ORTHO05D008302 2.2e-65 252.7 160 71.9
Dinv29017 Davidia involucrata HOM05D006675 ORTHO05D008302 1.4e-64 250.0 144 79.9
TPR.G19460 Trifolium pratense HOM05D006675 ORTHO05D008302 1.2e-63 246.9 139 79.9
CBR_g10842 Chara braunii HOM05D006675 ORTHO05D008302 7.7e-63 244.2 171 64.3
Gorai.003G186000 Gossypium raimondii HOM05D006675 ORTHO05D008302 7.7e-63 244.2 139 78.4
Sabra01G0105000 Salix brachista HOM05D006675 ORTHO05D008302 2.5e-61 239.2 218 58.7
Nitab4.5_0002188g0010 Nicotiana tabacum HOM05D006675 ORTHO05D008302 3.1e-56 222.2 179 63.1
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 1.6e-52 209.9 114 80.7
SGA_v2.0_scaffold8G04249 Striga asiatica HOM05D006675 ORTHO05D008302 2.2e-49 199.5 121 74.4
Cre02.g076400 Chlamydomonas reinhardtii HOM05D006675 ORTHO05D008302 2.8e-49 199.1 174 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis HOM05D006675 ORTHO05D008302 8.2e-49 197.6 153 62.1
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea HOM05D006675 ORTHO05D008302 1.2e-47 193.7 117 71.8
arahy.Tifrunner.gnm1.ann1.1JB7Z5 Arachis hypogaea HOM05D000001 ORTHO05D000003 2.3e-43 179.5 183 53.6
arahy.Tifrunner.gnm1.ann1.K4EES2 Arachis hypogaea HOM05D000001 ORTHO05D000003 2.3e-43 179.5 183 53.6
MCO12G007 Micromonas commoda HOM05D006675 ORTHO05D008302 2.7e-39 166.0 174 43.1
Os01g0658500 Oryza sativa ssp. japonica HOM05D006675 ORTHO05D008302 1.7e-38 163.3 93 76.3
PRCOL_00001914 Prasinoderma coloniale HOM05D006675 ORTHO05D008302 2.5e-37 159.5 174 44.8
Ah.12g055570 Amaranthus hybridus HOM05D000160 ORTHO05D008302 4.7e-36 155.2 113 71.7
vmacro00263 Vaccinium macrocarpon HOM05D006675 ORTHO05D008302 3.0e-35 152.5 96 71.9
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea HOM05D006675 ORTHO05D008302 1.2e-34 150.6 128 55.5
Psat2g139880 Pisum sativum HOM05D006675 ORTHO05D008302 4.4e-34 148.7 91 75.8
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla HOM05D006675 ORTHO05D008302 2.1e-28 129.8 177 41.8
GSVIVG01009131001 Vitis vinifera HOM05D006675 ORTHO05D008302 1.5e-26 123.6 80 70.0
CARHR288450 Cardamine hirsuta HOM05D006675 ORTHO05D008302 3.1e-24 115.9 71 70.4
BcaB07g30589 Brassica carinata HOM05D006675 ORTHO05D008302 7.0e-24 114.8 99 58.6
Actinidia29284 Actinidia chinensis HOM05D006675 ORTHO05D008302 7.3e-21 104.8 65 75.4
BcaB06g29627 Brassica carinata HOM05D006675 ORTHO05D008302 3.6e-20 102.4 100 56.0
A01p11020 Brassica napus HOM05D006675 ORTHO05D008302 2.0e-15 86.7 55 78.2
Haze_08131 Corylus avellana HOM05D006675 ORTHO05D008302 2.7e-15 86.3 49 81.6
Hund14383 Selenicereus undatus HOM05D006675 ORTHO05D008302 4.6e-15 85.5 55 74.5
FAN13G1728 Fragaria x ananassa HOM05D006675 ORTHO05D008302 3.9e-14 82.4 46 78.3
Gohir.D12G043050 Gossypium hirsutum HOM05D006675 ORTHO05D008302 7.8e-07 58.2 45 64.4


User provided reference genes

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