Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 2.6e-110 402.1 211 100.0
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 2.3e-58 229.6 198 65.7
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 4.8e-56 221.9 198 60.6
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 3.1e-55 219.2 201 62.7
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 4.0e-55 218.8 197 62.9
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 5.3e-55 218.4 204 61.8
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 6.9e-55 218.0 204 59.8
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 1.5e-54 216.9 194 62.9
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 2.6e-54 216.1 194 62.9
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 7.6e-54 214.5 198 60.6
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 1.3e-53 213.8 205 59.0
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 1.7e-53 213.4 194 62.4
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 8.4e-53 211.1 211 57.8
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 1.9e-52 209.9 202 58.4
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 3.2e-52 209.1 202 58.9
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 7.1e-52 208.0 204 58.3
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 9.3e-52 207.6 209 58.9
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 1.6e-51 206.8 213 57.3
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 2.1e-51 206.5 201 58.7
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 4.6e-51 205.3 202 58.4
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 4.6e-51 205.3 204 57.4
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 7.9e-51 204.5 204 57.4
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 1.0e-50 204.1 201 58.2
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 1.8e-50 203.4 199 58.3
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 2.3e-50 203.0 199 57.8
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 2.3e-50 203.0 203 56.2
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.9e-50 202.2 205 55.6
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 5.1e-50 201.8 209 57.9
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 5.1e-50 201.8 211 58.8
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 5.1e-50 201.8 205 55.6
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 5.1e-50 201.8 201 58.2
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 8.7e-50 201.1 219 53.4
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 8.7e-50 201.1 210 55.7
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 1.1e-49 200.7 205 56.1
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 1.1e-49 200.7 196 59.2
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 2.5e-49 199.5 203 56.2
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 2.5e-49 199.5 211 56.9
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 3.3e-49 199.1 209 56.0
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 3.3e-49 199.1 196 58.2
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 3.3e-49 199.1 214 54.7
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 4.3e-49 198.7 203 57.1
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 7.4e-49 198.0 206 57.8
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 9.6e-49 197.6 200 60.0
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 9.6e-49 197.6 204 56.9
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 9.6e-49 197.6 209 55.5
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 9.6e-49 197.6 205 55.6
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 1.3e-48 197.2 203 57.1
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 1.3e-48 197.2 201 58.7
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 1.6e-48 196.8 202 56.4
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 2.1e-48 196.4 208 55.8
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 2.8e-48 196.1 201 57.2
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 2.8e-48 196.1 206 56.3
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 2.8e-48 196.1 204 56.9
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 2.8e-48 196.1 209 55.5
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 3.7e-48 195.7 162 64.8
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 3.7e-48 195.7 212 53.8
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 3.7e-48 195.7 203 56.2
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 6.2e-48 194.9 200 58.0
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 8.2e-48 194.5 209 54.1
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 1.8e-47 193.4 200 58.5
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.1e-47 192.6 225 52.0
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.1e-47 192.6 208 55.8
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 6.9e-47 191.4 199 56.8
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 6.9e-47 191.4 199 56.8
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 6.9e-47 191.4 203 53.7
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 9.0e-47 191.0 204 54.9
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 1.2e-46 190.7 207 54.6
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 2.0e-46 189.9 208 55.3
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 4.5e-46 188.7 207 53.6
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 5.8e-46 188.3 204 55.4
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 1.0e-45 187.6 196 55.1
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 2.2e-45 186.4 223 50.7
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 2.2e-45 186.4 197 55.8
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 2.9e-45 186.0 223 50.2
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 2.9e-45 186.0 199 55.8
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 3.8e-45 185.7 223 51.1
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 3.8e-45 185.7 210 52.4
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 6.5e-45 184.9 205 55.1
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 8.4e-45 184.5 218 54.1
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 1.1e-44 184.1 220 53.6
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 5.5e-44 181.8 198 54.5
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 7.1e-44 181.4 199 54.8
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 7.1e-44 181.4 199 54.8
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 1.2e-43 180.6 201 53.2
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 2.1e-43 179.9 212 53.8
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 2.7e-43 179.5 204 55.4
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 2.7e-43 179.5 204 55.4
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 4.6e-43 178.7 205 52.7
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 4.6e-43 178.7 194 53.1
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 6.7e-42 174.9 123 74.8
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 2.5e-41 172.9 186 53.2
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 1.3e-40 170.6 213 49.3
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.6e-40 170.2 111 77.5
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 2.8e-40 169.5 196 51.0
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.1e-39 165.6 154 59.1
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 6.9e-39 164.9 219 47.9
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 9.0e-39 164.5 125 68.0
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 7.7e-38 161.4 113 73.5
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 1.1e-36 157.5 110 73.6
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.1e-31 141.0 202 45.0
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 2.0e-30 136.7 84 79.8
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 3.4e-30 136.0 83 80.7
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.8e-26 123.6 148 49.3
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 2.3e-26 123.2 148 48.6
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 3.9e-26 122.5 75 78.7
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 5.1e-26 122.1 149 48.3
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 1.3e-24 117.5 200 41.0
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 1.8e-23 113.6 213 39.0
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 8.5e-21 104.8 207 39.1
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.6e-19 100.5 204 37.7
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 3.0e-18 96.3 134 45.5
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.8e-13 79.3 146 37.0
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 6.5e-13 78.6 203 31.5
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 7.2e-12 75.1 64 62.5
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 9.4e-12 74.7 145 37.9
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 9.4e-12 74.7 44 77.3
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.1e-11 73.6 52 69.2
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 8.0e-11 71.6 45 73.3
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 6.3e-08 62.0 39 66.7
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.8e-07 60.5 156 35.9
MCO02G477 Micromonas commoda HOM05D006141 ORTHO05D007670 2.0e-06 57.0 96 36.5


User provided reference genes

Program Settings