Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G176 Amborella trichopoda HOM05D017498 ORTHO05D019559 1.0e-48 196.4 99 100.0
ATR0796G230 Amborella trichopoda HOM05D017498 ORTHO05D019559 1.9e-31 139.0 78 88.5
TWI73G0336 Tripterygium wilfordii HOM05D002087 ORTHO05D002101 4.6e-09 64.7 82 40.2
vmacro02442 Vaccinium macrocarpon HOM05D002087 ORTHO05D002101 1.3e-08 63.2 78 44.9
SEGI_31646 Sequoiadendron giganteum HOM05D017498 ORTHO05D019559 5.1e-08 61.2 78 42.3
Cc01_g20970 Coffea canephora HOM05D002087 ORTHO05D002101 1.1e-07 60.1 78 47.4
Migut.D00143 Erythranthe guttata HOM05D002087 ORTHO05D002101 1.5e-07 59.7 76 46.1
SEGI_04568 Sequoiadendron giganteum HOM05D017498 ORTHO05D019559 1.5e-07 59.7 43 55.8
SEGI_28360 Sequoiadendron giganteum HOM05D017498 ORTHO05D019559 1.5e-07 59.7 43 55.8
SEGI_31350 Sequoiadendron giganteum HOM05D017498 ORTHO05D019559 1.5e-07 59.7 43 55.8
Rhsim13G0009300 Rhododendron simsii HOM05D002087 ORTHO05D002101 1.9e-07 59.3 76 47.4
GSVIVG01028033001 Vitis vinifera HOM05D002087 ORTHO05D002101 1.9e-07 59.3 75 40.0
TAR365G0110 Trochodendron aralioides HOM05D002087 ORTHO05D002101 2.5e-07 58.9 78 44.9
TAR633G2750 Trochodendron aralioides HOM05D002087 ORTHO05D002101 2.5e-07 58.9 78 46.2
TAR636G0371 Trochodendron aralioides HOM05D002087 ORTHO05D002101 2.5e-07 58.9 76 43.4
Actinidia26754 Actinidia chinensis HOM05D002087 ORTHO05D002101 3.3e-07 58.5 43 60.5
Ah.08g213310 Amaranthus hybridus HOM05D002087 ORTHO05D002101 3.3e-07 58.5 80 43.8
CSS0043962 Camellia sinensis var. sinensis HOM05D002087 ORTHO05D002101 3.3e-07 58.5 75 44.0
PSO170G3454 Papaver somniferum HOM05D002087 ORTHO05D002101 4.3e-07 58.2 78 47.4
Oeu011462.1 Olea europaea HOM05D002087 ORTHO05D002101 5.6e-07 57.8 86 40.7
AUR62008681 Chenopodium quinoa HOM05D002087 ORTHO05D002101 7.3e-07 57.4 72 43.1
Dinv19683 Davidia involucrata HOM05D002087 ORTHO05D002101 7.3e-07 57.4 75 44.0
Nn3g21519 Nelumbo nucifera HOM05D002087 ORTHO05D002101 7.3e-07 57.4 38 63.2
Nitab4.5_0002820g0100 Nicotiana tabacum HOM05D002087 ORTHO05D002101 7.3e-07 57.4 74 43.2
Actinidia14332 Actinidia chinensis HOM05D002087 ORTHO05D002101 9.5e-07 57.0 82 40.2
Duzib151G0120 Durio zibethinus HOM05D002087 ORTHO05D002101 9.5e-07 57.0 81 42.0
SEGI_34856 Sequoiadendron giganteum HOM05D017498 ORTHO05D019559 9.5e-07 57.0 43 53.5
TWI09G0245 Tripterygium wilfordii HOM05D002087 ORTHO05D002101 9.5e-07 57.0 82 39.0
TAR362G1222 Trochodendron aralioides HOM05D002087 ORTHO05D002101 9.5e-07 57.0 77 48.1
Peaxi162Scf00399g00518 Petunia axillaris HOM05D002087 ORTHO05D002101 1.2e-06 56.6 77 45.5
Sed0008157 Sechium edule HOM05D002087 ORTHO05D002101 1.2e-06 56.6 92 38.0
AUR62025562 Chenopodium quinoa HOM05D002087 ORTHO05D002101 1.6e-06 56.2 72 43.1
Peaxi162Scf00001g00412 Petunia axillaris HOM05D002087 ORTHO05D002101 1.6e-06 56.2 76 43.4
Peaxi162Scf00140g01214 Petunia axillaris HOM05D002087 ORTHO05D002101 1.6e-06 56.2 90 40.0
Sopen09g030030 Solanum pennellii HOM05D002087 ORTHO05D002101 1.6e-06 56.2 78 39.7
Nn4g25778 Nelumbo nucifera HOM05D002087 ORTHO05D002101 2.1e-06 55.8 77 40.3
Phvul.009G249500 Phaseolus vulgaris HOM05D002087 ORTHO05D002101 2.1e-06 55.8 81 45.7
Sopen06g003900 Solanum pennellii HOM05D002087 ORTHO05D002101 2.1e-06 55.8 77 46.8
PGSC0003DMG400031788 Solanum tuberosum HOM05D002087 ORTHO05D002101 2.1e-06 55.8 80 46.2
EL10Ac7g17530 Beta vulgaris HOM05D002087 ORTHO05D002101 2.8e-06 55.5 72 41.7
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 2.8e-06 55.5 85 40.0
Glyma.09G043400 Glycine max HOM05D002087 ORTHO05D002101 2.8e-06 55.5 90 37.8
HanXRQChr15g0465591 Helianthus annuus HOM05D002087 ORTHO05D002101 2.8e-06 55.5 75 44.0
Oeu046672.1 Olea europaea HOM05D002087 ORTHO05D002101 2.8e-06 55.5 78 43.6
Actinidia25806 Actinidia chinensis HOM05D002087 ORTHO05D002101 3.6e-06 55.1 73 43.8
Aqoxy2G02929 Aquilegia oxysepala HOM05D002087 ORTHO05D002101 3.6e-06 55.1 76 42.1
DCAR_018327 Daucus carota HOM05D002087 ORTHO05D002101 3.6e-06 55.1 81 38.3
PSO407G0418 Papaver somniferum HOM05D002087 ORTHO05D002101 3.6e-06 55.1 47 57.4
Hund05435 Selenicereus undatus HOM05D002087 ORTHO05D002101 3.6e-06 55.1 75 41.3
Solyc09g075210.3 Solanum lycopersicum HOM05D002087 ORTHO05D002101 3.6e-06 55.1 79 43.0
CAN.G1280.4 Capsicum annuum HOM05D002087 ORTHO05D002101 4.7e-06 54.7 77 46.8
Ciclev10006308m.g Citrus clementina HOM05D002087 ORTHO05D002101 4.7e-06 54.7 87 40.2
Dinv29766 Davidia involucrata HOM05D002087 ORTHO05D002101 4.7e-06 54.7 82 41.5
Hma1.2p1_0494F.1_g165250 Hydrangea macrophylla HOM05D002087 ORTHO05D002101 4.7e-06 54.7 75 42.7
Solyc06g009140.3 Solanum lycopersicum HOM05D002087 ORTHO05D002101 4.7e-06 54.7 77 45.5
Aqoxy204s003 Aquilegia oxysepala HOM05D002087 ORTHO05D002101 6.2e-06 54.3 35 65.7
COL.COLO4_13835 Corchorus olitorius HOM05D002087 ORTHO05D002101 6.2e-06 54.3 80 42.5
SalBow1G8051 Salvia bowleyana HOM05D002087 ORTHO05D002101 6.2e-06 54.3 73 46.6
Hund18179 Selenicereus undatus HOM05D002087 ORTHO05D002101 6.2e-06 54.3 72 43.1
CAN.G1280.5 Capsicum annuum HOM05D002087 ORTHO05D002101 8.1e-06 53.9 77 37.7
CAN.G1989.10 Capsicum annuum HOM05D002087 ORTHO05D002101 8.1e-06 53.9 77 37.7
Gohir.D10G171400 Gossypium hirsutum HOM05D002087 ORTHO05D002101 8.1e-06 53.9 82 39.0
Gorai.011G191500 Gossypium raimondii HOM05D002087 ORTHO05D002101 8.1e-06 53.9 82 39.0
Nitab4.5_0000116g0500 Nicotiana tabacum HOM05D002087 ORTHO05D002101 8.1e-06 53.9 76 42.1
PSO170G4228 Papaver somniferum HOM05D002087 ORTHO05D002101 8.1e-06 53.9 34 64.7
TAR365G0861 Trochodendron aralioides HOM05D002087 ORTHO05D002101 8.1e-06 53.9 78 42.3
vmacro15151 Vaccinium macrocarpon HOM05D002087 ORTHO05D002101 8.1e-06 53.9 81 43.2


User provided reference genes

Program Settings