Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 7.9e-171 603.6 286 100.0
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 4.6e-102 375.2 254 70.1
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.5e-100 370.2 229 72.9
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 2.5e-100 369.4 247 69.2
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.6e-99 366.7 231 71.4
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.1e-98 364.0 231 72.7
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 1.4e-98 363.6 231 71.0
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 3.1e-98 362.5 284 60.2
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 3.1e-98 362.5 231 70.1
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 4.0e-98 362.1 232 71.6
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 6.8e-98 361.3 283 62.5
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 6.8e-98 361.3 231 69.7
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 8.9e-98 360.9 284 61.6
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.5e-97 360.1 288 60.8
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 2.6e-97 359.4 231 70.6
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 3.4e-97 359.0 231 70.1
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 4.4e-97 358.6 245 67.3
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 9.9e-97 357.5 251 66.5
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.3e-96 357.1 242 67.8
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.3e-96 357.1 239 69.5
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.7e-96 356.7 281 61.2
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 2.9e-96 355.9 268 63.4
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 3.7e-96 355.5 250 65.2
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 1.1e-95 354.0 232 69.0
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 1.9e-95 353.2 232 70.7
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 2.4e-95 352.8 254 65.4
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 2.4e-95 352.8 283 62.2
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 3.2e-95 352.4 235 68.9
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 3.2e-95 352.4 268 63.4
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 5.4e-95 351.7 233 69.5
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 5.4e-95 351.7 285 59.3
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 7.1e-95 351.3 232 68.5
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.2e-94 350.5 281 60.1
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 1.2e-94 350.5 280 60.0
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 1.6e-94 350.1 280 60.4
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 6.0e-94 348.2 232 69.4
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 7.8e-94 347.8 270 61.9
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 7.8e-94 347.8 283 60.1
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 7.8e-94 347.8 280 61.1
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 1.3e-93 347.1 281 60.1
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 3.0e-93 345.9 268 61.2
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 3.0e-93 345.9 258 63.6
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.0e-93 345.9 231 66.2
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 3.0e-93 345.9 233 69.1
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 3.9e-93 345.5 280 60.7
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 5.1e-93 345.1 233 68.7
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 5.1e-93 345.1 232 67.7
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 6.6e-93 344.7 268 60.8
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 6.6e-93 344.7 268 61.2
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 8.6e-93 344.4 237 66.2
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.1e-92 344.0 280 58.9
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.5e-92 343.6 227 68.7
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 3.3e-92 342.4 269 60.2
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 3.3e-92 342.4 286 59.8
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 4.3e-92 342.0 218 73.9
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 9.6e-92 340.9 238 64.3
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 9.6e-92 340.9 245 65.3
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.2e-91 340.5 280 58.2
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.6e-91 340.1 234 66.2
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 2.1e-91 339.7 285 61.8
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 2.1e-91 339.7 284 57.0
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 2.8e-91 339.3 226 67.3
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 1.1e-90 337.4 230 66.5
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.1e-90 337.4 246 62.6
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 4.0e-90 335.5 260 64.6
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 5.2e-90 335.1 286 58.4
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 5.2e-90 335.1 227 66.5
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 5.2e-90 335.1 235 66.4
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 6.8e-90 334.7 231 67.1
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 8.9e-90 334.3 238 63.0
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 1.2e-89 334.0 233 69.5
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.2e-89 334.0 231 64.5
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.2e-89 334.0 232 67.7
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 4.4e-89 332.0 229 65.1
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 1.3e-88 330.5 258 63.6
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 2.9e-88 329.3 237 65.4
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 6.4e-88 328.2 228 65.4
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.4e-87 327.0 222 70.7
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 1.9e-87 326.6 230 67.0
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 1.9e-87 326.6 230 67.0
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.9e-87 326.6 231 63.6
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 3.2e-87 325.9 231 66.7
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 4.2e-87 325.5 232 66.8
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 6.0e-86 321.6 286 56.6
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 3.0e-85 319.3 226 67.3
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 8.7e-85 317.8 230 61.7
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.1e-84 317.4 213 70.9
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 2.5e-84 316.2 246 64.2
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 4.3e-84 315.5 227 67.4
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 4.3e-84 315.5 227 67.4
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 4.3e-84 315.5 251 60.6
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 9.6e-84 314.3 206 69.9
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 2.6e-81 306.2 205 69.8
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 4.4e-81 305.4 245 60.0
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 2.9e-80 302.8 250 58.4
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.6e-78 297.0 174 75.3
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 9.9e-73 277.7 293 50.9
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 2.7e-70 269.6 225 59.1
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.0e-69 267.7 239 55.6
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.0e-64 251.1 223 53.8
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 6.5e-64 248.4 230 49.1
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.6e-62 243.8 234 50.9
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.5e-62 242.7 263 46.0
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.8e-61 240.4 143 75.5
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 8.7e-61 238.0 155 71.6
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 6.5e-56 221.9 235 43.4
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 4.2e-55 219.2 229 49.3
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 7.2e-55 218.4 255 45.9
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.2e-48 196.8 192 49.0
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 7.2e-47 191.8 114 74.6
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 4.6e-46 189.1 115 73.9
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.4e-42 177.6 114 67.5
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.5e-41 174.1 243 41.2
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 2.2e-35 153.7 162 48.1
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 3.6e-30 136.3 115 55.7
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 2.0e-20 104.0 70 64.3
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.5e-12 75.5 58 63.8
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.2e-09 68.2 47 57.4
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 2.5e-07 60.5 104 37.5
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 4.7e-06 56.2 34 73.5


User provided reference genes

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