Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G048 Amborella trichopoda HOM05D028407 ORTHO05D011070 1.3e-243 845.9 407 100.0
ATR0075G023 Amborella trichopoda HOM05D028407 ORTHO05D011070 2.0e-66 257.3 459 37.9
ATR0681G100 Amborella trichopoda HOM05D015022 ORTHO05D011070 1.5e-29 134.8 425 28.0
ATR0681G080 Amborella trichopoda HOM05D015022 ORTHO05D011070 1.5e-26 124.8 405 28.1
ATR0796G283 Amborella trichopoda HOM05D015022 ORTHO05D011070 3.3e-21 107.1 331 29.9
ATR0866G001 Amborella trichopoda HOM05D015022 ORTHO05D011070 3.7e-20 103.6 440 25.5
ATR0763G127 Amborella trichopoda HOM05D028407 ORTHO05D011070 4.2e-16 90.1 234 31.2
ATR0706G198 Amborella trichopoda HOM05D028407 ORTHO05D011070 1.6e-12 78.2 112 38.4
ATR1127G159 Amborella trichopoda HOM05D015801 ORTHO05D011070 2.4e-11 74.3 257 27.2
ATR1127G193 Amborella trichopoda HOM05D015801 ORTHO05D011070 2.4e-11 74.3 447 22.6
ATR0681G009 Amborella trichopoda HOM05D015801 ORTHO05D011070 6.9e-11 72.8 439 21.9
ATR0594G199 Amborella trichopoda HOM05D015801 ORTHO05D011070 2.6e-10 70.9 281 26.0
ATR0772G161 Amborella trichopoda HOM05D015022 ORTHO05D011070 7.6e-10 69.3 291 27.5
ATR0824G139 Amborella trichopoda HOM05D015022 ORTHO05D011070 2.9e-09 67.4 320 25.6
ATR0681G231 Amborella trichopoda HOM05D015801 ORTHO05D011070 3.8e-09 67.0 171 33.3
TAR627G1140 Trochodendron aralioides HOM05D000007 ORTHO05D000017 6.5e-09 66.2 125 35.2
Phvul.006G157000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 1.1e-08 65.5 362 24.9
Dinv12702 Davidia involucrata HOM05D000007 ORTHO05D000039 2.5e-08 64.3 237 25.3
Dinv12703 Davidia involucrata HOM05D000007 ORTHO05D000039 7.1e-08 62.8 210 27.1
Lj1P667T11 Lonicera japonica HOM05D000007 ORTHO05D000039 7.1e-08 62.8 216 25.5
Lj1P672T29 Lonicera japonica HOM05D000007 ORTHO05D000039 7.1e-08 62.8 216 25.5
RcHm_v2.0_Chr5g0030151 Rosa chinensis HOM05D000007 ORTHO05D000017 7.1e-08 62.8 142 35.2
MD17G1124300 Malus domestica HOM05D000007 ORTHO05D000017 9.3e-08 62.4 144 31.2
TAR624G0325 Trochodendron aralioides HOM05D000007 ORTHO05D000017 1.2e-07 62.0 138 31.9
ATR0736G153 Amborella trichopoda HOM05D012411 ORTHO05D011070 2.1e-07 61.2 131 32.8
CARHR099880 Cardamine hirsuta HOM05D000007 ORTHO05D000017 4.6e-07 60.1 325 26.2
AUR62039095 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.6e-07 60.1 130 31.5
THA.LOC104808704 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 4.6e-07 60.1 155 27.7
Lj1P669T8 Lonicera japonica HOM05D000007 ORTHO05D000039 7.9e-07 59.3 174 28.2
Medtr3g036430 Medicago truncatula HOM05D000007 ORTHO05D000017 7.9e-07 59.3 188 28.2
ATR0824G055 Amborella trichopoda HOM05D015022 ORTHO05D011070 1.0e-06 58.9 319 24.8
Potri.001G318300 Populus trichocarpa HOM05D000007 ORTHO05D000017 1.0e-06 58.9 197 27.9
Eucgr.H02694 Eucalyptus grandis HOM05D000007 ORTHO05D000017 1.3e-06 58.5 199 27.6
Nn1g00748 Nelumbo nucifera HOM05D000007 ORTHO05D000017 1.8e-06 58.2 137 32.1
TAR626G0319 Trochodendron aralioides HOM05D000007 ORTHO05D000017 1.8e-06 58.2 139 31.7
AT3G23880 Arabidopsis thaliana HOM05D000007 ORTHO05D000017 2.3e-06 57.8 131 33.6
MBI19_g26733_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 3.0e-06 57.4 129 27.9
Peaxi162Scf00698g00119 Petunia axillaris HOM05D000007 ORTHO05D000017 3.0e-06 57.4 155 29.7
Rhsim03G0162100 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.0e-06 57.4 206 25.7
Ah.14g085690 Amaranthus hybridus HOM05D000007 ORTHO05D000017 3.9e-06 57.0 149 29.5
Medtr7g022670 Medicago truncatula HOM05D000007 ORTHO05D000017 3.9e-06 57.0 300 23.3
Medtr7g061010 Medicago truncatula HOM05D000007 ORTHO05D000017 3.9e-06 57.0 163 31.3
RcHm_v2.0_Chr1g0372381 Rosa chinensis HOM05D000007 ORTHO05D000017 3.9e-06 57.0 364 23.1
CDE06G0907 Ceratophyllum demersum HOM05D000855 ORTHO05D000491 5.1e-06 56.6 169 30.2
ATR0681G217 Amborella trichopoda HOM05D015801 ORTHO05D011070 6.7e-06 56.2 148 30.4
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 6.7e-06 56.2 175 27.4
Sc05g0008980 Simmondsia chinensis HOM05D000007 ORTHO05D000017 6.7e-06 56.2 134 30.6
FAN06G4881 Fragaria x ananassa HOM05D000007 ORTHO05D000017 8.7e-06 55.8 302 21.2
Medtr7g066850 Medicago truncatula HOM05D000007 ORTHO05D000017 8.7e-06 55.8 128 32.0
Medtr7g078050 Medicago truncatula HOM05D000007 ORTHO05D000017 8.7e-06 55.8 125 32.0
PSO063G5542 Papaver somniferum HOM05D000007 ORTHO05D000017 8.7e-06 55.8 143 28.7
TAR624G0498 Trochodendron aralioides HOM05D000007 ORTHO05D000017 8.7e-06 55.8 186 26.9
vmacro12417 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 8.7e-06 55.8 169 26.6


User provided reference genes

Program Settings