Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 5.7e-107 391.0 202 100.0
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 3.0e-47 192.6 189 55.6
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 1.7e-42 176.8 181 52.5
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 9.3e-41 171.0 159 56.0
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.6e-40 170.2 208 51.0
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 3.5e-40 169.1 159 54.1
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 4.6e-40 168.7 192 51.0
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 4.6e-40 168.7 172 54.7
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 6.0e-40 168.3 157 54.8
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 6.0e-40 168.3 159 56.6
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.0e-39 167.5 208 50.5
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.0e-39 167.5 159 56.6
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.3e-39 167.2 189 46.6
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.3e-39 167.2 156 54.5
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 2.3e-39 166.4 149 58.4
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 5.1e-39 165.2 152 55.9
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 6.6e-39 164.9 159 53.5
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 8.7e-39 164.5 140 56.4
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 8.7e-39 164.5 192 50.0
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 1.1e-38 164.1 163 56.4
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.5e-38 163.7 180 46.7
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.5e-38 163.7 186 48.9
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 1.9e-38 163.3 165 50.9
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 2.5e-38 162.9 176 47.7
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 2.5e-38 162.9 149 53.7
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 4.3e-38 162.2 155 54.8
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 4.3e-38 162.2 181 48.1
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 5.6e-38 161.8 178 52.2
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 7.3e-38 161.4 180 48.3
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.3e-37 160.6 153 52.3
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 1.3e-37 160.6 193 47.7
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 2.1e-37 159.8 180 48.9
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 2.8e-37 159.5 187 47.6
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.6e-37 159.1 150 55.3
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 3.6e-37 159.1 150 55.3
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 4.8e-37 158.7 161 51.6
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 6.2e-37 158.3 185 47.6
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.8e-36 156.8 195 44.6
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 1.8e-36 156.8 189 47.1
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 2.4e-36 156.4 143 56.6
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.4e-36 156.4 150 54.0
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 2.4e-36 156.4 150 56.7
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 6.9e-36 154.8 180 48.3
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.2e-35 154.1 187 48.7
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 1.5e-35 153.7 143 55.9
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.5e-35 153.7 157 50.3
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.5e-35 153.7 177 47.5
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 2.6e-35 152.9 179 45.8
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.6e-35 152.9 197 44.2
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 3.4e-35 152.5 152 52.6
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 4.4e-35 152.1 192 44.8
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 5.8e-35 151.8 151 51.0
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 1.3e-34 150.6 145 53.8
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 2.2e-34 149.8 185 48.6
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 2.9e-34 149.4 187 45.5
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 8.4e-34 147.9 189 48.1
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.4e-33 147.1 185 46.5
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 7.1e-33 144.8 181 48.6
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.1e-33 144.8 189 46.6
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.1e-33 144.8 184 48.4
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.6e-32 143.7 179 46.4
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 1.6e-32 143.7 180 46.7
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.6e-32 143.7 189 45.0
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 2.7e-32 142.9 149 48.3
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.7e-32 142.9 180 43.9
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 4.6e-32 142.1 151 49.7
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 6.0e-32 141.7 127 55.1
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 6.0e-32 141.7 135 54.1
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.3e-31 140.6 152 44.7
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.3e-31 140.6 149 47.7
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.7e-31 140.2 156 46.2
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.7e-31 140.2 165 43.6
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 2.3e-31 139.8 150 48.7
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.3e-31 139.8 194 40.7
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 3.0e-31 139.4 125 62.4
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 3.9e-31 139.0 176 42.6
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 3.9e-31 139.0 149 48.3
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 3.9e-31 139.0 149 48.3
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 3.9e-31 139.0 176 43.2
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 3.9e-31 139.0 182 45.6
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 3.9e-31 139.0 166 48.8
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 6.6e-31 138.3 149 48.3
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 6.6e-31 138.3 149 48.3
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 6.6e-31 138.3 149 48.3
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 8.7e-31 137.9 145 52.4
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 8.7e-31 137.9 158 50.0
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.5e-30 137.1 176 43.2
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 1.5e-30 137.1 176 46.6
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.5e-30 137.1 149 47.7
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.5e-30 137.1 149 47.7
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.5e-30 137.1 166 48.2
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.5e-30 136.3 191 41.9
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 3.3e-30 136.0 176 43.8
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 5.6e-30 135.2 176 46.6
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 7.3e-30 134.8 145 51.7
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 3.6e-29 132.5 164 47.6
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 5.8e-27 125.2 191 41.4
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 5.8e-27 125.2 175 42.9
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 2.9e-26 122.9 126 53.2
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 1.9e-25 120.2 124 51.6
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.2e-24 117.5 137 47.4
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 7.9e-24 114.8 163 40.5
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.3e-23 114.0 192 44.8
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 2.1e-21 106.7 114 52.6
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.8e-21 106.3 115 48.7
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 7.6e-19 98.2 107 51.4
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 9.3e-17 91.3 81 50.6
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 4.6e-16 89.0 98 44.9
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 1.1e-14 84.3 180 32.2
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.6e-11 73.2 112 42.9
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 4.5e-11 72.4 137 34.3
SEGI_25216 Sequoiadendron giganteum HOM05D006977 ORTHO05D008738 2.5e-06 56.6 77 45.5


User provided reference genes

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