Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 1.7e-114 416.0 205 100.0
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 5.5e-65 251.5 192 67.7
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 9.3e-65 250.8 188 66.0
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 3.5e-64 248.8 189 65.1
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 1.0e-63 247.3 184 65.2
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 1.0e-63 247.3 189 65.1
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 1.5e-62 243.4 187 65.2
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 1.9e-62 243.0 189 66.1
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 3.3e-62 242.3 189 64.0
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 5.7e-62 241.5 194 62.9
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 5.7e-62 241.5 194 62.9
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 5.7e-62 241.5 192 64.1
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 1.3e-61 240.4 189 63.5
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 1.6e-61 240.0 188 63.8
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 2.1e-61 239.6 188 66.0
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 4.8e-61 238.4 189 61.4
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 1.8e-60 236.5 187 62.0
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 1.8e-60 236.5 185 64.3
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 2.4e-60 236.1 187 62.0
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 2.4e-60 236.1 185 64.3
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 4.1e-60 235.3 187 63.1
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 5.3e-60 235.0 194 60.3
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 5.3e-60 235.0 189 63.0
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 5.3e-60 235.0 187 62.6
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 9.0e-60 234.2 188 61.2
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 1.2e-59 233.8 191 61.8
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 2.0e-59 233.0 187 61.5
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 2.6e-59 232.6 188 62.2
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 3.4e-59 232.3 188 61.7
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 4.5e-59 231.9 194 60.8
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 5.9e-59 231.5 186 60.2
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 1.0e-58 230.7 194 60.3
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 1.3e-58 230.3 194 60.8
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 1.7e-58 229.9 189 60.8
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 2.2e-58 229.6 191 60.7
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 2.9e-58 229.2 189 60.8
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 3.8e-58 228.8 188 62.8
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 3.8e-58 228.8 190 61.1
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 3.8e-58 228.8 196 59.7
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 5.0e-58 228.4 186 62.9
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 8.5e-58 227.6 191 61.8
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 8.5e-58 227.6 192 62.5
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 1.1e-57 227.3 189 61.4
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 1.1e-57 227.3 191 62.3
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 1.1e-57 227.3 194 60.3
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 1.9e-57 226.5 190 63.2
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 1.9e-57 226.5 189 61.4
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 2.5e-57 226.1 192 60.9
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 2.5e-57 226.1 194 60.3
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 3.2e-57 225.7 190 58.4
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 5.5e-57 224.9 189 61.4
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 9.3e-57 224.2 191 62.3
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 1.2e-56 223.8 186 61.3
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 1.2e-56 223.8 193 59.6
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 1.2e-56 223.8 191 59.2
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 1.6e-56 223.4 193 59.1
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 2.1e-56 223.0 189 59.3
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 3.6e-56 222.2 188 60.6
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 6.1e-56 221.5 194 57.7
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 6.1e-56 221.5 192 58.3
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 6.1e-56 221.5 188 62.8
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 7.9e-56 221.1 192 57.8
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 7.9e-56 221.1 192 57.8
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 1.0e-55 220.7 189 59.8
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 1.0e-55 220.7 192 57.8
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 1.0e-55 220.7 189 58.7
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 1.3e-55 220.3 192 57.8
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 1.3e-55 220.3 231 53.7
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 3.0e-55 219.2 192 57.8
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 5.1e-55 218.4 192 57.8
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 6.7e-55 218.0 196 56.1
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 6.7e-55 218.0 196 56.1
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 6.7e-55 218.0 189 56.6
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 6.7e-55 218.0 190 58.4
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 1.5e-54 216.9 191 57.6
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 1.9e-54 216.5 188 61.2
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 3.3e-54 215.7 192 57.8
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 5.7e-54 214.9 194 59.3
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 5.7e-54 214.9 227 52.0
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 9.7e-54 214.2 193 57.0
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 1.6e-53 213.4 194 58.2
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 2.2e-53 213.0 189 57.1
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 3.7e-53 212.2 193 57.5
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 1.8e-52 209.9 197 56.3
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 1.8e-52 209.9 197 56.3
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 1.2e-51 207.2 188 57.4
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 2.9e-50 202.6 189 57.1
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 6.5e-50 201.4 194 54.1
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 1.4e-49 200.3 192 55.2
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 1.4e-49 200.3 162 64.2
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 3.2e-49 199.1 192 54.7
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 7.2e-49 198.0 194 56.7
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 3.0e-47 192.6 194 55.2
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 6.7e-47 191.4 188 55.9
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 8.8e-47 191.0 193 54.9
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 8.8e-47 191.0 193 54.9
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 2.0e-46 189.9 272 42.3
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 5.7e-46 188.3 188 54.8
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 1.3e-45 187.2 199 53.3
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 2.2e-45 186.4 193 53.9
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 3.7e-45 185.7 191 52.4
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 3.7e-45 185.7 188 54.8
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 8.2e-45 184.5 199 51.8
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 4.1e-44 182.2 188 53.2
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 2.9e-42 176.0 188 51.1
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 1.0e-34 151.0 185 46.5
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 2.9e-34 149.4 146 53.4
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 6.5e-34 148.3 188 46.3
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 8.0e-32 141.4 121 58.7
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 3.1e-28 129.4 121 57.0
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 4.1e-28 129.0 119 58.0
Mapoly0043s0113 Marchantia polymorpha HOM05D006871 ORTHO05D008544 4.2e-25 119.0 185 40.5
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 3.2e-17 92.8 122 47.5
Cre17.g726650 Chlamydomonas reinhardtii HOM05D006871 ORTHO05D008544 4.0e-15 85.9 205 33.2
MCO15G582 Micromonas commoda HOM05D006871 ORTHO05D008544 8.6e-10 68.2 202 29.7
MD05G1198200 Malus domestica HOM05D006871 ORTHO05D008544 1.9e-09 67.0 45 62.2
CBR_g19096 Chara braunii HOM05D006871 ORTHO05D008544 3.6e-08 62.8 67 47.8
Nitab4.5_0000119g0320 Nicotiana tabacum HOM05D006871 ORTHO05D008544 1.2e-06 57.8 43 60.5
RcHm_v2.0_Chr2g0134071 Rosa chinensis HOM05D006871 ORTHO05D008544 3.4e-06 56.2 70 44.3


User provided reference genes

Program Settings