Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 9.0e-51 203.4 108 100.0
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.1e-32 143.3 102 71.6
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 3.2e-32 141.7 105 71.4
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 1.2e-31 139.8 105 68.6
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.6e-31 139.4 100 71.0
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 2.7e-31 138.7 106 67.0
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 2.7e-31 138.7 100 70.0
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 2.7e-31 138.7 100 72.0
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 4.6e-31 137.9 100 70.0
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 6.1e-31 137.5 100 70.0
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.0e-30 136.7 100 68.0
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.8e-30 136.0 104 65.4
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 2.3e-30 135.6 105 66.7
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 3.0e-30 135.2 105 65.7
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 3.0e-30 135.2 102 66.7
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 3.9e-30 134.8 106 66.0
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 5.1e-30 134.4 100 68.0
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.5e-29 132.9 102 66.7
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 1.9e-29 132.5 97 68.0
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 2.5e-29 132.1 100 67.0
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 2.5e-29 132.1 105 64.8
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 3.3e-29 131.7 100 67.0
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 4.3e-29 131.3 97 66.0
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 4.3e-29 131.3 100 65.0
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 4.3e-29 131.3 101 66.3
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 5.7e-29 131.0 101 65.3
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 7.4e-29 130.6 100 68.0
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 1.7e-28 129.4 103 63.1
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 1.7e-28 129.4 100 66.0
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.7e-28 128.3 99 65.7
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 4.8e-28 127.9 97 63.9
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 4.8e-28 127.9 105 61.9
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 6.3e-28 127.5 100 67.0
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 8.2e-28 127.1 105 61.0
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 8.2e-28 127.1 102 62.7
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 8.2e-28 127.1 104 60.6
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 8.2e-28 127.1 100 66.0
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.1e-27 126.7 104 62.5
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.1e-27 126.7 104 62.5
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 1.1e-27 126.7 104 62.5
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.1e-27 126.7 104 62.5
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.1e-27 126.7 104 62.5
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.1e-27 126.7 99 65.7
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 1.4e-27 126.3 100 64.0
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 1.4e-27 126.3 103 62.1
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.8e-27 125.9 102 62.7
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.8e-27 125.9 100 64.0
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 2.4e-27 125.6 99 65.7
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.4e-27 125.6 99 65.7
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 3.1e-27 125.2 105 61.9
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 3.1e-27 125.2 102 62.7
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.1e-27 124.8 99 65.7
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 4.1e-27 124.8 101 63.4
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 5.3e-27 124.4 104 60.6
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 5.3e-27 124.4 95 66.3
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 5.3e-27 124.4 109 62.4
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 6.9e-27 124.0 105 60.0
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 6.9e-27 124.0 107 57.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 6.9e-27 124.0 107 57.0
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 6.9e-27 124.0 108 56.5
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 6.9e-27 124.0 105 61.9
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 9.1e-27 123.6 101 64.4
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 9.1e-27 123.6 105 60.0
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 1.2e-26 123.2 103 62.1
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 1.2e-26 123.2 105 60.0
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.5e-26 122.9 102 63.7
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 2.0e-26 122.5 102 63.7
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 2.0e-26 122.5 106 56.6
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 2.6e-26 122.1 101 62.4
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 2.6e-26 122.1 99 63.6
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.6e-26 122.1 105 57.1
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.6e-26 122.1 105 57.1
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 2.6e-26 122.1 103 62.1
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 3.4e-26 121.7 102 59.8
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 3.4e-26 121.7 101 62.4
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 3.4e-26 121.7 107 56.1
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 4.5e-26 121.3 104 60.6
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 5.9e-26 120.9 103 59.2
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 5.9e-26 120.9 103 59.2
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 5.9e-26 120.9 102 59.8
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 5.9e-26 120.9 100 60.0
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 7.7e-26 120.6 102 63.7
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 1.0e-25 120.2 105 60.0
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 1.0e-25 120.2 101 61.4
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 1.3e-25 119.8 103 59.2
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 2.2e-25 119.0 97 63.9
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 2.9e-25 118.6 103 61.2
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 8.5e-25 117.1 101 60.4
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 1.1e-24 116.7 105 57.1
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 1.9e-24 115.9 106 56.6
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 2.5e-24 115.5 102 56.9
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 2.5e-24 115.5 102 55.9
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 3.2e-24 115.2 102 55.9
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 9.4e-24 113.6 118 54.2
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.2e-23 113.2 81 72.8
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 1.6e-23 112.8 95 63.2
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 3.6e-23 111.7 97 62.9
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 3.6e-23 111.7 103 59.2
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 6.1e-23 110.9 103 57.3
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 2.3e-22 109.0 80 71.2
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 5.1e-22 107.8 97 60.8
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.7e-20 102.8 80 65.0
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 3.7e-20 101.7 76 68.4
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 8.2e-20 100.5 153 41.2
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 1.4e-19 99.8 105 52.4
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.4e-19 99.8 83 63.9
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 4.1e-19 98.2 78 62.8
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 4.1e-19 98.2 83 62.7
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.5e-18 96.3 76 63.2
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.5e-18 96.3 79 62.0
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 2.6e-18 95.5 76 61.8
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 2.6e-18 95.5 102 52.9
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 7.7e-18 94.0 76 64.5
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 1.3e-17 93.2 100 51.0
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 2.2e-17 92.4 82 59.8
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 2.2e-17 92.4 102 50.0
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.4e-16 89.7 79 58.2
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 6.7e-14 80.9 72 56.9
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 8.8e-14 80.5 107 45.8
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 8.8e-14 80.5 90 46.7
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 3.3e-13 78.6 105 45.7
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.1e-08 63.5 54 63.0
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 1.5e-08 63.2 56 51.8
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 1.5e-08 63.2 56 51.8
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 9.4e-08 60.5 50 54.0
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 6.1e-07 57.8 96 36.5
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 8.8e-06 53.9 97 33.0
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 8.8e-06 53.9 83 34.9


User provided reference genes

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