Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G016 Amborella trichopoda HOM05D009101 ORTHO05D011226 1.2e-75 286.6 160 100.0
Nn4g25278 Nelumbo nucifera HOM05D009101 ORTHO05D011226 3.4e-30 135.6 139 59.0
MBI18_g39665_MAGBIO Magnolia biondii HOM05D009101 ORTHO05D011226 7.6e-30 134.4 163 56.4
Cfa015746 Carpinus fangiana HOM05D009101 ORTHO05D011226 3.0e-26 122.5 146 52.7
Eucgr.H04137 Eucalyptus grandis HOM05D009101 ORTHO05D011226 1.9e-25 119.8 106 61.3
QL06p014659 Quercus lobata HOM05D009101 ORTHO05D011226 1.3e-24 117.1 91 70.3
CiPaw.01G127500 Carya illinoinensis HOM05D009101 ORTHO05D011226 8.1e-24 114.4 145 48.3
Atru.chr4.3183 Acer truncatum HOM05D009101 ORTHO05D011226 1.1e-23 114.0 92 68.5
Dinv29494 Davidia involucrata HOM05D009101 ORTHO05D011226 2.0e-22 109.8 144 49.3
Oeu002209.1 Olea europaea HOM05D009101 ORTHO05D011226 4.5e-22 108.6 134 54.5
FvH4_4g21731 Fragaria vesca HOM05D009101 ORTHO05D011226 9.9e-22 107.5 121 52.9
FAN12G1764 Fragaria x ananassa HOM05D009101 ORTHO05D011226 9.9e-22 107.5 121 52.9
PGR004G1430 Punica granatum HOM05D009101 ORTHO05D011226 9.9e-22 107.5 146 45.9
Ciclev10005889m.g Citrus clementina HOM05D009101 ORTHO05D011226 1.3e-21 107.1 108 55.6
CANSAT78G2401 Cannabis sativa HOM05D009101 ORTHO05D011226 4.9e-21 105.1 82 65.9
PSO170G1471 Papaver somniferum HOM05D009101 ORTHO05D011226 4.9e-21 105.1 152 46.7
Glyma.09G080400 Glycine max HOM05D009101 ORTHO05D011226 6.4e-21 104.8 153 44.4
RcHm_v2.0_Chr4g0427961 Rosa chinensis HOM05D009101 ORTHO05D011226 5.5e-20 101.7 118 51.7
Phvul.009G220900 Phaseolus vulgaris HOM05D009101 ORTHO05D011226 9.3e-20 100.9 157 46.5
Actinidia08061 Actinidia chinensis HOM05D009101 ORTHO05D011226 2.1e-19 99.8 92 58.7
MD16G1133700 Malus domestica HOM05D009101 ORTHO05D011226 2.7e-19 99.4 129 51.2
GSVIVG01017702001 Vitis vinifera HOM05D009101 ORTHO05D011226 2.7e-19 99.4 153 48.4
RcHm_v2.0_Chr4g0427931 Rosa chinensis HOM05D009101 ORTHO05D011226 3.5e-19 99.0 144 45.8
Lalb_Chr08g0232991 Lupinus albus HOM05D009101 ORTHO05D011226 1.8e-18 96.7 138 47.1
VMungo1309G0395 Vigna mungo HOM05D009101 ORTHO05D011226 1.8e-18 96.7 151 45.0
Hma1.2p1_1067F.1_g253870 Hydrangea macrophylla HOM05D009101 ORTHO05D011226 2.3e-18 96.3 77 68.8
Os05g0137600 Oryza sativa ssp. japonica HOM05D009101 ORTHO05D011226 8.7e-18 94.4 82 63.4
Potri.010G003700 Populus trichocarpa HOM05D009101 ORTHO05D011226 1.5e-17 93.6 127 52.8
SEGI_22717 Sequoiadendron giganteum HOM05D009101 ORTHO05D011226 1.5e-17 93.6 114 47.4
Medtr2g045060 Medicago truncatula HOM05D009101 ORTHO05D011226 6.2e-16 88.2 157 42.7
Ca_02328_v3 Cicer arietinum L. HOM05D009101 ORTHO05D011226 1.8e-15 86.7 75 64.0
Psat1g017160 Pisum sativum HOM05D009101 ORTHO05D011226 2.4e-15 86.3 114 49.1
FAN07G2413 Fragaria x ananassa HOM05D009101 ORTHO05D011226 9.0e-15 84.3 147 42.9
MD13G1137900 Malus domestica HOM05D009101 ORTHO05D011226 1.5e-14 83.6 74 63.5
Rhsim12G0024800 Rhododendron simsii HOM05D009101 ORTHO05D011226 7.6e-14 81.3 145 40.0
Glyma.15G185900 Glycine max HOM05D009101 ORTHO05D011226 4.9e-13 78.6 121 44.6
Gohir.D11G250500 Gossypium hirsutum HOM05D002994 ORTHO05D003337 1.8e-07 60.1 74 39.2
Gorai.007G268600 Gossypium raimondii HOM05D002994 ORTHO05D003337 1.8e-07 60.1 74 39.2
Mapoly0132s0020 Marchantia polymorpha HOM05D002994 ORTHO05D003337 1.8e-07 60.1 73 39.7
Sed0012175 Sechium edule HOM05D002994 ORTHO05D003337 3.1e-07 59.3 81 37.0
CsaV3_6G042440 Cucumis sativus L. HOM05D002994 ORTHO05D003337 5.3e-07 58.5 120 34.2
ClCG07G000990 Citrullus lanatus HOM05D002994 ORTHO05D003337 6.9e-07 58.2 78 38.5
AagrBONN_evm.TU.Sc2ySwM_117.294 Anthoceros agrestis HOM05D002994 ORTHO05D003337 2.0e-06 56.6 71 35.2
Ah.02g124390 Amaranthus hybridus HOM05D004874 ORTHO05D006796 2.6e-06 56.2 119 35.3
Rhsim02G0173800 Rhododendron simsii HOM05D002994 ORTHO05D003337 2.6e-06 56.2 95 32.6
MELO3C012902.2 Cucumis melo HOM05D002994 ORTHO05D003337 3.4e-06 55.8 85 36.5
Phvul.011G018900 Phaseolus vulgaris HOM05D002994 ORTHO05D003337 3.4e-06 55.8 136 30.1
AL1G18960 Arabidopsis lyrata HOM05D002994 ORTHO05D003337 4.5e-06 55.5 74 40.5
CsaV3_3G022500 Cucumis sativus L. HOM05D002994 ORTHO05D003337 4.5e-06 55.5 60 41.7
SalBow1G2572 Salvia bowleyana HOM05D002994 ORTHO05D003337 4.5e-06 55.5 81 35.8
MSTRG.9226 Avicennia marina HOM05D002994 ORTHO05D003337 5.9e-06 55.1 123 27.6
VMungo1127G1567 Vigna mungo HOM05D002994 ORTHO05D003337 7.7e-06 54.7 113 29.2
Prupe.8G225000 Prunus persica HOM05D002994 ORTHO05D003337 1.0e-05 54.3 156 28.2


User provided reference genes

Program Settings