Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 7.9e-299 1029.6 503 100.0
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 1.3e-115 421.0 527 45.7
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 1.9e-111 407.1 521 43.4
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 2.1e-110 403.7 523 43.8
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 4.4e-108 396.0 523 44.2
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 1.1e-106 391.3 510 43.3
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 1.0e-104 384.8 525 44.4
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.8e-101 374.0 523 43.6
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 1.2e-100 371.3 546 41.9
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 4.4e-100 369.4 525 41.1
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 9.8e-100 368.2 523 42.6
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 1.3e-99 367.9 523 42.4
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 1.9e-98 364.0 476 45.2
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 5.4e-98 362.5 516 42.2
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 7.0e-98 362.1 524 41.6
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 9.2e-98 361.7 515 41.0
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 6.0e-97 359.0 530 43.0
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 2.3e-96 357.1 520 40.6
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 3.0e-96 356.7 518 39.8
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 5.0e-96 355.9 520 41.3
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 8.6e-96 355.1 516 40.5
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 5.6e-95 352.4 527 40.2
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 9.5e-95 351.7 523 39.2
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 4.7e-94 349.4 524 41.8
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 6.2e-94 349.0 524 39.5
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 8.1e-94 348.6 516 41.9
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 1.7e-91 340.9 517 40.8
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 1.9e-90 337.4 655 36.3
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 1.6e-89 334.3 526 40.1
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 2.1e-89 334.0 518 41.7
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 3.5e-89 333.2 525 41.3
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 7.8e-89 332.0 522 40.8
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 1.3e-88 331.3 515 40.2
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 1.7e-88 330.9 511 39.5
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 2.3e-88 330.5 514 38.1
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 2.3e-88 330.5 517 40.0
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 3.0e-88 330.1 517 41.2
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 5.6e-87 325.9 480 40.6
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 7.3e-87 325.5 508 39.2
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 9.5e-87 325.1 524 40.1
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 9.5e-87 325.1 510 40.2
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 1.6e-86 324.3 523 40.2
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 6.2e-86 322.4 511 39.5
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 2.4e-85 320.5 464 44.8
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 4.0e-85 319.7 523 40.0
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 5.2e-85 319.3 484 41.3
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 8.9e-85 318.5 377 48.5
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 8.9e-85 318.5 536 38.4
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 1.2e-84 318.2 525 38.9
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 7.6e-84 315.5 474 40.3
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 7.6e-84 315.5 513 39.2
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 2.2e-83 313.9 518 38.0
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 2.2e-83 313.9 516 39.1
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 2.2e-83 313.9 517 40.8
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 2.1e-81 307.4 518 39.2
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 7.8e-81 305.4 462 40.5
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 7.8e-81 305.4 516 39.1
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 1.7e-80 304.3 507 36.9
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 2.3e-80 303.9 517 38.7
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 3.0e-80 303.5 512 37.9
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 3.0e-80 303.5 449 39.4
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 2.1e-78 297.4 519 36.6
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 7.6e-76 288.9 517 38.3
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 1.3e-75 288.1 524 38.5
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 1.7e-75 287.7 520 37.1
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 3.2e-74 283.5 525 37.3
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 9.3e-74 282.0 526 37.5
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 2.1e-73 280.8 526 37.5
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 2.7e-73 280.4 524 37.2
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 6.0e-73 279.3 495 36.6
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 5.1e-72 276.2 530 37.5
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.9e-71 274.2 471 38.0
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 2.5e-71 273.9 446 40.6
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 1.4e-69 268.1 510 36.5
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 1.5e-68 264.6 525 36.4
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 4.5e-68 263.1 471 36.5
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 3.5e-65 253.4 539 32.3
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 1.0e-64 251.9 525 35.0
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 1.3e-64 251.5 400 37.0
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 2.3e-64 250.8 408 38.2
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 3.0e-64 250.4 378 40.5
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 5.1e-64 249.6 446 39.0
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 8.7e-64 248.8 393 39.9
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 1.4e-58 231.5 247 49.8
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 1.6e-57 228.0 482 33.8
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 2.7e-57 227.3 452 34.5
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 1.6e-54 218.0 275 45.8
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 2.4e-53 214.2 408 37.3
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 2.5e-50 204.1 312 40.1
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 6.7e-48 196.1 556 28.8
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 3.7e-46 190.3 311 39.9
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 5.5e-42 176.4 530 28.5
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 1.2e-41 175.3 469 29.2
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.2e-41 175.3 222 42.8
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 5.3e-37 159.8 338 35.2
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 2.5e-34 151.0 152 54.6
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 5.1e-32 143.3 255 36.9
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 6.7e-32 142.9 320 33.8
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 2.0e-31 141.4 580 24.5
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 2.8e-30 137.5 286 35.3
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 3.1e-29 134.0 136 50.0
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 8.5e-27 125.9 128 52.3
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 9.4e-26 122.5 164 39.0
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 2.1e-25 121.3 203 35.0
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 6.7e-24 116.3 283 32.9
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 4.4e-23 113.6 116 49.1
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 8.5e-19 99.4 167 37.7
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 4.2e-18 97.1 102 44.1
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 4.2e-18 97.1 133 39.8
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 4.1e-13 80.5 217 31.8
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 3.8e-11 73.9 133 35.3
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 1.9e-10 71.6 252 31.3
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 7.5e-07 59.7 136 32.4
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 1.3e-06 58.9 122 34.4
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 2.2e-06 58.2 137 34.3
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 2.2e-06 58.2 137 34.3
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 2.2e-06 58.2 67 43.3
ATR0585G118 Amborella trichopoda HOM05D004386 ORTHO05D005247 6.3e-06 56.6 87 34.5


User provided reference genes

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