Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.5e-124 449.5 226 100.0
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 9.6e-79 297.4 196 77.0
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 1.3e-78 297.0 208 70.7
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 4.8e-78 295.0 220 70.5
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 5.3e-77 291.6 208 69.7
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 6.9e-77 291.2 195 75.4
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.1e-74 283.9 211 69.2
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 1.4e-74 283.5 224 65.2
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 2.1e-73 279.6 219 66.7
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 2.1e-73 279.6 193 71.5
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 3.5e-73 278.9 199 69.8
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 7.9e-73 277.7 170 77.1
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 1.0e-72 277.3 218 64.7
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.7e-72 276.6 213 67.6
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 1.7e-72 276.6 207 68.1
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 1.7e-72 276.6 183 74.9
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 1.7e-72 276.6 195 70.3
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 6.6e-72 274.6 188 69.7
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.1e-71 273.9 198 68.7
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 1.1e-71 273.9 196 68.4
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.1e-71 273.9 185 74.1
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 1.1e-71 273.9 195 69.7
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 1.5e-71 273.5 189 72.0
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 2.5e-71 272.7 205 66.8
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 3.3e-71 272.3 204 66.7
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 4.3e-71 271.9 191 71.2
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 4.3e-71 271.9 194 69.6
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 5.6e-71 271.6 200 68.0
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 5.6e-71 271.6 210 63.8
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 7.3e-71 271.2 194 69.1
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.3e-70 270.4 182 70.9
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 2.8e-70 269.2 179 73.2
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 4.8e-70 268.5 172 74.4
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.1e-69 267.3 204 65.7
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 1.1e-69 267.3 179 73.2
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 1.4e-69 266.9 183 70.5
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 1.8e-69 266.5 223 61.0
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.8e-69 266.5 221 60.6
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 2.4e-69 266.2 184 71.2
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 3.1e-69 265.8 226 62.8
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 3.1e-69 265.8 183 70.5
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 4.0e-69 265.4 182 71.4
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 5.3e-69 265.0 249 60.2
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 9.0e-69 264.2 202 68.8
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 9.0e-69 264.2 194 68.6
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 1.5e-68 263.5 175 70.9
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 1.5e-68 263.5 220 62.3
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 2.0e-68 263.1 180 72.2
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.0e-68 263.1 221 59.7
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.6e-68 262.7 202 67.8
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 3.4e-68 262.3 184 70.7
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 4.5e-68 261.9 185 70.3
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 9.9e-68 260.8 223 60.5
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 1.3e-67 260.4 224 61.2
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 2.2e-67 259.6 220 59.5
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 2.9e-67 259.2 227 62.1
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 6.4e-67 258.1 196 65.3
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 2.4e-66 256.1 220 62.3
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 2.4e-66 256.1 209 64.1
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 3.2e-66 255.8 172 72.1
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 4.2e-66 255.4 212 62.7
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 2.1e-65 253.1 171 70.8
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.1e-65 253.1 172 71.5
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 3.5e-65 252.3 166 72.9
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 6.0e-65 251.5 189 66.7
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 6.0e-65 251.5 180 68.3
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 1.0e-64 250.8 193 66.8
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 1.0e-64 250.8 186 66.7
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.3e-64 250.4 228 57.5
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 3.9e-64 248.8 217 59.0
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 3.9e-64 248.8 229 59.0
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 3.9e-64 248.8 192 66.7
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 5.1e-64 248.4 193 65.8
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.5e-63 246.9 232 57.8
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 4.3e-63 245.4 195 64.6
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 4.3e-63 245.4 195 64.6
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 4.8e-62 241.9 193 62.7
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 1.4e-61 240.4 194 63.4
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 1.4e-61 240.4 192 65.1
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 1.8e-61 240.0 233 57.5
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 3.1e-61 239.2 215 60.9
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 4.0e-61 238.8 197 61.9
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 1.7e-59 233.4 218 58.7
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 2.9e-59 232.6 134 79.1
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 2.9e-59 232.6 196 59.2
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 6.5e-59 231.5 177 61.6
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 8.4e-59 231.1 196 60.7
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 2.1e-57 226.5 137 78.8
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 6.0e-57 224.9 223 57.4
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 7.9e-57 224.6 274 48.9
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 2.2e-43 179.9 148 62.2
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 1.1e-42 177.6 200 52.0
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 1.3e-38 164.1 99 76.8
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.7e-38 163.7 99 74.7
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 3.7e-38 162.5 159 50.9
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 5.3e-37 158.7 159 54.1
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 3.2e-34 149.4 136 58.8
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 2.7e-33 146.4 123 61.8
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 2.3e-32 143.3 153 48.4
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 1.7e-30 137.1 129 58.9
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 7.7e-28 128.3 63 96.8
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 5.7e-23 112.1 111 51.4
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 9.7e-23 111.3 87 66.7
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 4.8e-22 109.0 64 75.0
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 1.1e-21 107.8 119 52.1
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 1.4e-13 80.9 61 63.9
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 5.4e-13 79.0 112 44.6
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.7e-12 76.6 119 39.5
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 7.7e-12 75.1 97 51.5
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 7.7e-12 75.1 61 62.3
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 3.2e-10 69.7 146 31.5
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 4.7e-09 65.9 97 38.1
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.4e-07 59.3 53 56.6


User provided reference genes

Program Settings