Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.9e-167 592.4 297 100.0
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 3.4e-116 422.2 304 70.7
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 7.5e-116 421.0 304 69.1
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.9e-115 419.1 305 70.2
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 8.3e-115 417.5 304 68.8
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.4e-114 416.8 304 68.4
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 9.2e-114 414.1 304 67.4
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 6.0e-113 411.4 302 66.9
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 7.8e-113 411.0 304 68.8
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.0e-112 410.6 304 67.1
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.3e-112 410.2 304 69.7
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 3.9e-112 408.7 306 67.3
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 6.6e-112 407.9 304 68.1
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 6.6e-112 407.9 304 67.4
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.1e-111 407.1 304 66.8
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 1.1e-111 407.1 297 70.0
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.1e-111 407.1 304 67.4
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 1.5e-111 406.8 304 66.8
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 1.5e-111 406.8 304 66.8
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 2.5e-111 406.0 300 68.7
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 4.3e-111 405.2 304 66.8
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 4.3e-111 405.2 304 67.1
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 4.3e-111 405.2 303 67.0
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 5.6e-111 404.8 304 67.8
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 5.6e-111 404.8 304 67.8
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 7.3e-111 404.4 304 66.4
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 7.3e-111 404.4 304 67.4
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 9.5e-111 404.1 304 67.1
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.2e-110 403.7 304 67.4
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 1.2e-110 403.7 304 65.5
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 1.2e-110 403.7 304 65.5
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.1e-110 402.9 304 66.8
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 3.6e-110 402.1 304 66.1
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 4.7e-110 401.7 304 65.8
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 4.7e-110 401.7 302 66.2
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.7e-110 401.7 304 66.4
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 6.2e-110 401.4 304 66.4
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 6.2e-110 401.4 304 67.1
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 8.1e-110 401.0 304 64.8
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.4e-109 400.2 304 66.8
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 1.4e-109 400.2 304 66.4
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.8e-109 399.8 304 66.1
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 2.4e-109 399.4 304 65.1
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 3.1e-109 399.1 304 64.5
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 3.1e-109 399.1 304 66.4
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 5.2e-109 398.3 304 66.4
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 5.2e-109 398.3 299 67.6
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 8.9e-109 397.5 304 64.8
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 1.2e-108 397.1 304 66.8
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.0e-108 396.4 299 67.6
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.6e-108 396.0 304 65.8
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 2.6e-108 396.0 304 66.1
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 2.6e-108 396.0 299 67.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 2.6e-108 396.0 299 65.2
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.4e-108 395.2 302 65.9
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 4.4e-108 395.2 304 66.8
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 5.8e-108 394.8 304 65.1
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 5.8e-108 394.8 304 64.5
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 5.8e-108 394.8 303 63.7
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.3e-107 393.7 304 65.5
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.2e-107 392.9 304 65.8
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 4.9e-107 391.7 304 63.5
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 8.4e-107 391.0 304 65.1
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.4e-106 390.2 304 63.2
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.9e-106 389.8 306 64.1
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 1.9e-106 389.8 306 64.1
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.9e-106 389.8 306 64.1
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.9e-106 389.8 300 65.0
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.9e-106 389.8 303 64.4
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 5.4e-106 388.3 304 63.5
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 9.2e-106 387.5 306 63.4
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 1.2e-105 387.1 306 63.4
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 1.6e-105 386.7 306 63.4
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 1.6e-105 386.7 303 62.4
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 2.7e-105 386.0 304 62.8
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 3.5e-105 385.6 295 64.1
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 4.6e-105 385.2 304 64.1
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 1.1e-103 380.6 306 62.7
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.1e-103 380.6 299 62.9
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.9e-103 379.8 306 64.1
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 2.5e-103 379.4 306 64.1
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 7.3e-103 377.9 303 63.4
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 9.6e-103 377.5 208 93.8
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 1.1e-101 374.0 306 63.7
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.8e-101 373.2 306 63.4
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.3e-99 367.1 300 62.7
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 1.7e-99 366.7 284 67.3
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 4.3e-95 352.1 283 65.7
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 7.3e-95 351.3 298 60.4
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 2.4e-90 336.3 304 57.2
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.0e-88 330.9 262 64.9
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 5.1e-88 328.6 246 69.1
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 1.6e-86 323.6 260 62.7
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 8.1e-86 321.2 281 58.7
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 5.3e-85 318.5 254 63.8
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 4.9e-83 312.0 266 61.3
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 6.4e-83 311.6 294 53.4
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.6e-81 307.0 293 54.3
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.7e-81 306.2 259 61.4
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.5e-79 300.4 248 62.1
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 3.2e-74 282.7 230 62.2
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 8.7e-72 274.6 292 53.1
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.1e-69 267.7 185 70.3
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.4e-69 267.3 291 48.8
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.5e-68 263.8 201 65.2
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.8e-67 259.2 297 49.8
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 4.2e-66 255.8 309 44.7
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.8e-64 250.4 220 60.0
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 5.7e-47 192.2 314 39.5
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 7.0e-45 185.3 296 40.9
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.1e-42 177.9 162 50.0
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.5e-36 156.0 104 69.2
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 3.8e-35 152.9 357 30.8
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.1e-34 151.4 91 73.6
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.9e-34 150.6 142 59.2
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.2e-34 148.7 144 59.7
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.2e-32 142.5 144 57.6
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 4.4e-31 139.4 308 32.1
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.8e-29 134.0 329 28.6
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.1e-26 124.8 141 53.9
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.4e-24 117.9 257 37.0
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.2e-23 114.8 79 70.9
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 6.4e-14 82.4 43 83.7


User provided reference genes

Program Settings