Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.5e-110 402.9 208 100.0
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 6.7e-103 377.5 208 93.8
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 9.1e-68 260.8 215 64.7
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.6e-67 260.0 214 65.0
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.0e-66 257.3 216 64.4
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.0e-66 257.3 214 63.1
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.7e-66 256.5 215 63.7
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.3e-66 256.1 214 63.1
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.3e-66 256.1 214 63.6
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 5.0e-66 255.0 215 61.4
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.1e-65 253.8 215 63.3
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.1e-65 253.8 216 62.0
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.5e-65 253.4 214 62.1
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 1.9e-65 253.1 213 64.8
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.9e-65 253.1 212 61.3
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.9e-65 253.1 214 64.5
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 3.3e-65 252.3 215 63.3
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 3.3e-65 252.3 213 62.0
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 5.5e-65 251.5 215 60.9
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 7.2e-65 251.1 215 62.8
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 9.5e-65 250.8 214 62.1
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 9.5e-65 250.8 213 59.6
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 9.5e-65 250.8 215 63.3
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.2e-64 250.4 214 63.1
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 1.6e-64 250.0 215 61.4
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 3.6e-64 248.8 214 62.1
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 4.7e-64 248.4 214 59.8
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 4.7e-64 248.4 215 61.4
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 6.1e-64 248.1 215 61.9
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 8.0e-64 247.7 215 60.5
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.0e-63 247.3 214 62.6
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 1.0e-63 247.3 215 61.4
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.8e-63 246.5 215 61.9
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 2.3e-63 246.1 214 61.7
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 2.3e-63 246.1 211 58.8
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 3.0e-63 245.7 215 60.9
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.0e-63 245.7 215 62.8
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.0e-63 245.7 214 61.7
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 3.0e-63 245.7 214 60.7
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 3.0e-63 245.7 215 60.9
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 4.0e-63 245.4 214 62.1
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 6.8e-63 244.6 214 58.9
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 6.8e-63 244.6 214 58.9
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 6.8e-63 244.6 214 59.3
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 6.8e-63 244.6 214 62.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 6.8e-63 244.6 214 59.8
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 8.9e-63 244.2 214 61.2
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 8.9e-63 244.2 215 60.9
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 8.9e-63 244.2 214 60.7
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.2e-62 243.8 215 61.9
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.2e-62 243.8 214 60.7
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 1.5e-62 243.4 214 60.7
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 2.0e-62 243.0 212 60.8
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 2.0e-62 243.0 212 60.8
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 2.6e-62 242.7 216 60.6
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 3.4e-62 242.3 215 57.7
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 4.4e-62 241.9 216 60.2
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 4.4e-62 241.9 216 60.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 4.4e-62 241.9 216 60.2
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.4e-62 241.9 215 60.5
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 5.7e-62 241.5 216 59.7
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 5.7e-62 241.5 214 59.8
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 5.7e-62 241.5 213 59.2
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.5e-62 241.1 213 60.6
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 7.5e-62 241.1 216 61.1
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 7.5e-62 241.1 214 59.8
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 9.8e-62 240.7 214 59.3
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 1.3e-61 240.4 216 58.8
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.2e-61 239.6 216 59.3
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 3.7e-61 238.8 216 61.1
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.7e-61 238.8 216 59.3
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 3.7e-61 238.8 214 59.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 3.7e-61 238.8 214 58.9
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 3.7e-61 238.8 216 60.2
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 3.7e-61 238.8 214 60.7
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 4.9e-61 238.4 216 60.6
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 4.9e-61 238.4 214 58.4
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 4.9e-61 238.4 214 58.9
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 6.3e-61 238.0 214 59.8
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.4e-60 236.9 214 59.3
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.8e-60 236.5 216 60.2
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.8e-60 236.5 214 59.3
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 2.4e-60 236.1 216 60.2
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 5.4e-60 235.0 213 59.2
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 5.4e-60 235.0 213 58.2
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.2e-59 233.8 210 59.5
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 1.0e-58 230.7 210 58.6
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.4e-54 215.3 209 56.5
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 6.0e-51 204.9 194 58.8
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 7.8e-51 204.5 197 57.9
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 1.0e-50 204.1 205 51.7
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.1e-49 200.7 193 60.1
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 5.6e-49 198.4 164 64.0
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.2e-46 190.7 222 49.1
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.5e-46 190.3 179 59.2
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.3e-45 187.2 186 56.5
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.3e-45 187.2 210 50.0
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.4e-44 183.7 193 52.8
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.6e-43 180.3 172 59.3
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 2.1e-43 179.9 196 49.0
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 3.0e-42 176.0 178 56.7
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 9.5e-41 171.0 208 46.2
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 1.4e-39 167.2 156 60.9
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 5.2e-39 165.2 166 57.2
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 8.9e-39 164.5 165 55.8
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 5.4e-36 155.2 171 52.0
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-32 144.1 142 56.3
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.1e-31 141.0 139 57.6
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.6e-30 134.8 139 55.4
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 4.6e-27 125.6 168 45.2
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 7.8e-27 124.8 113 60.2
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.3e-25 119.4 138 52.9
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-24 116.7 95 65.3
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.4e-23 114.0 79 72.2
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.4e-23 114.0 204 38.2
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.7e-21 107.1 140 50.7
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.7e-21 107.1 210 35.7
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.2e-19 100.9 198 35.4
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 4.9e-13 79.0 228 28.1
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 8.7e-10 68.2 73 45.2


User provided reference genes

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