Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0789G086 Amborella trichopoda HOM05D005721 ORTHO05D006758 0.0e+00 1320.8 661 100.0
MBI01_g16575_MAGBIO Magnolia biondii HOM05D005721 ORTHO05D006758 1.1e-260 903.3 659 70.7
TAR383G0756 Trochodendron aralioides HOM05D005721 ORTHO05D006758 6.1e-259 897.5 663 70.6
Aqoxy7G03983 Aquilegia oxysepala HOM05D005721 ORTHO05D006758 2.5e-252 875.5 663 68.6
PSO210G3246 Papaver somniferum HOM05D005721 ORTHO05D006758 4.0e-250 868.2 677 68.5
Dinv37937 Davidia involucrata HOM05D005721 ORTHO05D006758 2.9e-248 862.1 651 68.0
PSO210G5250 Papaver somniferum HOM05D005721 ORTHO05D006758 4.1e-247 858.2 664 69.0
GSVIVG01016897001 Vitis vinifera HOM05D005721 ORTHO05D006758 1.6e-246 856.3 654 68.2
Nn6g35400 Nelumbo nucifera HOM05D005721 ORTHO05D006758 1.1e-244 850.1 661 66.7
Duzib235G0012 Durio zibethinus HOM05D005721 ORTHO05D006758 1.9e-244 849.4 653 67.8
Hma1.2p1_0388F.1_g142110 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 1.6e-243 846.3 651 67.1
Nn8g38942 Nelumbo nucifera HOM05D005721 ORTHO05D006758 2.8e-243 845.5 663 65.9
CSS0018154 Camellia sinensis var. sinensis HOM05D005721 ORTHO05D006758 6.1e-243 844.3 652 66.7
Gohir.A10G062400 Gossypium hirsutum HOM05D005721 ORTHO05D006758 5.2e-242 841.3 653 66.6
Gorai.011G068100 Gossypium raimondii HOM05D005721 ORTHO05D006758 1.2e-241 840.1 653 66.5
vmacro18826 Vaccinium macrocarpon HOM05D005721 ORTHO05D006758 1.7e-240 836.3 651 66.1
Haze_15914 Corylus avellana HOM05D005721 ORTHO05D006758 2.9e-240 835.5 653 65.8
Thecc.06G106800 Theobroma cacao HOM05D005721 ORTHO05D006758 6.4e-240 834.3 654 67.0
Dinv30404 Davidia involucrata HOM05D005721 ORTHO05D006758 5.4e-239 831.2 628 68.3
Eucgr.F03100 Eucalyptus grandis HOM05D005721 ORTHO05D006758 1.6e-238 829.7 650 66.2
MD17G1178100 Malus domestica HOM05D005721 ORTHO05D006758 2.7e-238 828.9 653 65.8
CiPaw.01G227700 Carya illinoinensis HOM05D005721 ORTHO05D006758 1.3e-237 826.6 654 65.4
Medtr8g015550 Medicago truncatula HOM05D005721 ORTHO05D006758 8.6e-237 823.9 652 64.1
Duzib192G0301 Durio zibethinus HOM05D005721 ORTHO05D006758 1.1e-236 823.5 654 66.7
Actinidia21738 Actinidia chinensis HOM05D005721 ORTHO05D006758 1.5e-236 823.2 656 65.4
QL05p015721 Quercus lobata HOM05D005721 ORTHO05D006758 1.5e-236 823.2 653 64.9
Prupe.3G053200 Prunus persica HOM05D005721 ORTHO05D006758 1.9e-236 822.8 647 65.7
RcHm_v2.0_Chr2g0142311 Rosa chinensis HOM05D005721 ORTHO05D006758 3.3e-236 822.0 655 65.6
CANSAT56G2950 Cannabis sativa HOM05D005721 ORTHO05D006758 1.6e-235 819.7 648 65.1
Lsat_1_v5_gn_4_96061 Lactuca sativa HOM05D005721 ORTHO05D006758 3.6e-235 818.5 651 65.0
Psat4g194600 Pisum sativum HOM05D005721 ORTHO05D006758 3.6e-235 818.5 656 64.2
QL05p015579 Quercus lobata HOM05D005721 ORTHO05D006758 6.2e-235 817.8 647 64.9
PGR102G0208 Punica granatum HOM05D005721 ORTHO05D006758 8.1e-235 817.4 670 64.2
Glyma.08G196700 Glycine max HOM05D005721 ORTHO05D006758 1.8e-234 816.2 656 64.5
MD09G1196700 Malus domestica HOM05D005721 ORTHO05D006758 1.8e-234 816.2 648 65.3
Ciclev10025098m.g Citrus clementina HOM05D005721 ORTHO05D006758 2.3e-234 815.8 669 64.1
Lalb_Chr01g0013341 Lupinus albus HOM05D005721 ORTHO05D006758 5.8e-233 811.2 658 63.7
CsaV3_7G034930 Cucumis sativus L. HOM05D005721 ORTHO05D006758 1.3e-232 810.1 648 64.7
Glyma.07G013000 Glycine max HOM05D005721 ORTHO05D006758 1.3e-232 810.1 656 64.2
ECA232G2751 Erigeron canadensis HOM05D005721 ORTHO05D006758 2.2e-232 809.3 646 64.1
Lj3g0007444 Lotus japonicus HOM05D005721 ORTHO05D006758 3.2e-231 805.4 654 63.5
Ca_23291_v3 Cicer arietinum L. HOM05D005721 ORTHO05D006758 9.2e-231 803.9 647 63.7
FAN02G2457 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.2e-230 803.5 649 64.3
Sed0006169 Sechium edule HOM05D005721 ORTHO05D006758 3.5e-230 802.0 647 63.7
Os01g0706700 Oryza sativa ssp. japonica HOM05D005721 ORTHO05D006758 4.6e-230 801.6 657 63.9
FvH4_6g32880 Fragaria vesca HOM05D005721 ORTHO05D006758 6.0e-230 801.2 649 64.1
Nitab4.5_0004848g0040 Nicotiana tabacum HOM05D005721 ORTHO05D006758 1.7e-229 799.7 676 62.3
Manes.11G029200 Manihot esculenta HOM05D005721 ORTHO05D006758 6.6e-229 797.7 648 63.4
Solyc03g121350.3 Solanum lycopersicum HOM05D005721 ORTHO05D006758 1.5e-228 796.6 665 62.9
Atru.chr1.3621 Acer truncatum HOM05D005721 ORTHO05D006758 1.9e-228 796.2 648 63.7
Sopen03g040160 Solanum pennellii HOM05D005721 ORTHO05D006758 1.9e-228 796.2 665 62.7
Hund07658 Selenicereus undatus HOM05D005721 ORTHO05D006758 2.5e-228 795.8 648 63.7
FAN05G3306 Fragaria x ananassa HOM05D005721 ORTHO05D006758 3.3e-228 795.4 649 63.9
CAN.G1668.6 Capsicum annuum HOM05D005721 ORTHO05D006758 4.3e-228 795.0 659 62.5
Migut.I00999 Erythranthe guttata HOM05D005721 ORTHO05D006758 2.1e-227 792.7 663 63.2
VMungo0331G1465 Vigna mungo HOM05D005721 ORTHO05D006758 2.1e-227 792.7 659 63.4
SGA_v2.0_scaffold71G23752 Striga asiatica HOM05D005721 ORTHO05D006758 6.2e-227 791.2 660 62.7
Cc04_g02230 Coffea canephora HOM05D005721 ORTHO05D006758 1.2e-225 786.9 660 62.7
Gohir.D10G064100 Gossypium hirsutum HOM05D005721 ORTHO05D006758 3.4e-225 785.4 580 69.0
Phvul.010G142500 Phaseolus vulgaris HOM05D005721 ORTHO05D006758 4.4e-225 785.0 658 62.8
C06p47250 Brassica napus HOM05D005721 ORTHO05D006758 8.6e-221 770.8 647 62.0
BolC6t39764H Brassica oleracea HOM05D005721 ORTHO05D006758 8.6e-221 770.8 647 62.0
THA.LOC104813944 Tarenaya hassleriana HOM05D005721 ORTHO05D006758 8.6e-221 770.8 670 60.6
A07p39040 Brassica napus HOM05D005721 ORTHO05D006758 4.3e-220 768.5 647 61.8
AT1G73020 Arabidopsis thaliana HOM05D005721 ORTHO05D006758 5.6e-220 768.1 654 61.8
AL2G32770 Arabidopsis lyrata HOM05D005721 ORTHO05D006758 1.1e-218 763.8 654 61.3
BraA07t31454Z Brassica rapa HOM05D005721 ORTHO05D006758 3.1e-218 762.3 658 60.9
CARHR065990 Cardamine hirsuta HOM05D005721 ORTHO05D006758 4.0e-218 761.9 654 61.2
Nitab4.5_0006071g0030 Nicotiana tabacum HOM05D005721 ORTHO05D006758 4.0e-218 761.9 674 61.7
Sp5g27980 Schrenkiella parvula HOM05D005721 ORTHO05D006758 1.5e-217 760.0 647 62.0
TPR.G8754 Trifolium pratense HOM05D005721 ORTHO05D006758 4.4e-217 758.4 619 63.7
Carub.0002s1978 Capsella rubella HOM05D005721 ORTHO05D006758 7.6e-217 757.7 654 61.0
Thhalv10018233m.g Eutrema salsugineum HOM05D005721 ORTHO05D006758 8.4e-216 754.2 657 60.7
Peaxi162Scf00038g01247 Petunia axillaris HOM05D005721 ORTHO05D006758 4.2e-215 751.9 653 59.7
ClCG09G000510 Citrullus lanatus HOM05D005721 ORTHO05D006758 8.7e-213 744.2 648 61.1
Aa31LG4G3310 Aethionema arabicum HOM05D005721 ORTHO05D006758 3.6e-211 738.8 654 59.8
Lj9A516G96 Lonicera japonica HOM05D005721 ORTHO05D006758 2.6e-209 732.6 658 60.2
BolC6t38551H Brassica oleracea HOM05D005721 ORTHO05D006758 4.4e-209 731.9 650 58.6
arahy.Tifrunner.gnm1.ann1.NQY1Y2 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.7e-208 729.9 659 57.1
arahy.Tifrunner.gnm1.ann1.HT12QJ Arachis hypogaea HOM05D005721 ORTHO05D006758 2.2e-208 729.6 660 57.3
BraA07t30638Z Brassica rapa HOM05D005721 ORTHO05D006758 5.1e-205 718.4 650 58.0
BcaC08g45678 Brassica carinata HOM05D005721 ORTHO05D006758 1.5e-204 716.8 650 58.0
Zm00001eb361150 Zea mays HOM05D005721 ORTHO05D006758 5.6e-204 714.9 561 66.1
Rhsim08G0230700 Rhododendron simsii HOM05D005721 ORTHO05D006758 9.0e-202 707.6 654 59.2
C06p34410 Brassica napus HOM05D005721 ORTHO05D006758 3.4e-201 705.7 650 57.2
A07p30000 Brassica napus HOM05D005721 ORTHO05D006758 1.1e-199 700.7 650 57.1
EL10Ac9g21136 Beta vulgaris HOM05D005721 ORTHO05D006758 6.7e-197 691.4 692 56.6
Oeu001923.1 Olea europaea HOM05D005721 ORTHO05D006758 2.4e-194 682.9 660 58.0
Sc12g0009950 Simmondsia chinensis HOM05D005721 ORTHO05D006758 1.4e-186 657.1 576 59.2
DCAR_031423 Daucus carota HOM05D005721 ORTHO05D006758 1.9e-183 646.7 541 62.5
Hma1.2p1_0388F.1_g142120 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 9.3e-183 644.4 531 63.5
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 4.5e-177 625.5 632 54.1
AUR62023905 Chenopodium quinoa HOM05D005721 ORTHO05D006758 2.3e-173 613.2 621 55.6
AagrBONN_evm.TU.Sc2ySwM_344.674 Anthoceros agrestis HOM05D005721 ORTHO05D006758 7.4e-172 608.2 660 49.1
AUR62038341 Chenopodium quinoa HOM05D005721 ORTHO05D006758 1.2e-169 600.9 681 51.7
Ah.01g004440 Amaranthus hybridus HOM05D005721 ORTHO05D006758 1.9e-167 593.6 658 52.7
Zm00001eb155350 Zea mays HOM05D005721 ORTHO05D006758 5.5e-167 592.0 507 61.1
SMO147G0374 Selaginella moellendorffii HOM05D005721 ORTHO05D006758 2.3e-165 586.6 664 45.8
Mapoly0004s0214 Marchantia polymorpha HOM05D005721 ORTHO05D006758 6.7e-165 585.1 646 47.7
Cpa.g.sc131.22 Carica papaya HOM05D005721 ORTHO05D006758 2.2e-163 580.1 650 52.3
Pp3c7_22640 Physcomitrium patens HOM05D005721 ORTHO05D006758 5.0e-152 542.3 656 44.5
Oeu026535.1 Olea europaea HOM05D005721 ORTHO05D006758 1.2e-145 521.2 449 61.0
Actinidia32127 Actinidia chinensis HOM05D005721 ORTHO05D006758 8.0e-142 508.4 661 46.4
MELO3C024406.2 Cucumis melo HOM05D005721 ORTHO05D006758 1.0e-141 508.1 583 49.9
CBR_g57226 Chara braunii HOM05D005721 ORTHO05D006758 4.0e-125 453.0 628 39.8
arahy.Tifrunner.gnm1.ann1.NL3M0M Arachis hypogaea HOM05D005721 ORTHO05D006758 2.3e-72 277.7 344 46.5
FAN14G1222 Fragaria x ananassa HOM05D005721 ORTHO05D006758 4.5e-68 263.5 226 58.0
Zm00001eb344360 Zea mays HOM05D005721 ORTHO05D006758 6.7e-48 196.4 137 72.3
Oeu023783.1 Olea europaea HOM05D005721 ORTHO05D006758 1.7e-46 191.8 278 45.0
Glyma.16G086100 Glycine max HOM05D005721 ORTHO05D006758 6.5e-43 179.9 107 80.4
Glyma.16G136400 Glycine max HOM05D005721 ORTHO05D006758 2.7e-41 174.5 107 78.5
Zm00001eb192810 Zea mays HOM05D005721 ORTHO05D006758 8.0e-41 172.9 110 79.1
SEGI_20658 Sequoiadendron giganteum HOM05D005721 ORTHO05D006758 1.4e-37 162.2 238 36.1
Zm00001eb419420 Zea mays HOM05D005721 ORTHO05D006758 1.0e-35 156.0 97 78.4
arahy.Tifrunner.gnm1.ann1.P3QXG2 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.7e-35 155.2 116 62.9
Gorai.010G178600 Gossypium raimondii HOM05D005721 ORTHO05D006758 4.0e-32 144.1 162 48.8
Glyma.12G149950 Glycine max HOM05D005721 ORTHO05D006758 6.8e-32 143.3 85 80.0
FvH4_6g32370 Fragaria vesca HOM05D005721 ORTHO05D006758 1.7e-30 138.7 142 51.4
arahy.Tifrunner.gnm1.ann1.402B9T Arachis hypogaea HOM05D005721 ORTHO05D006758 2.8e-30 137.9 304 32.6
Gohir.D06G152751 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.7e-28 131.3 162 45.7
VMungo0251G0043 Vigna mungo HOM05D005721 ORTHO05D006758 7.2e-26 123.2 172 43.6
arahy.Tifrunner.gnm1.ann1.F8M988 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.0e-24 119.4 94 64.9
HanXRQChr05g0162621 Helianthus annuus HOM05D005721 ORTHO05D006758 1.4e-24 119.0 81 67.9
HanXRQChr04g0123091 Helianthus annuus HOM05D005721 ORTHO05D006758 6.8e-24 116.7 80 66.2
QL05p015216 Quercus lobata HOM05D005721 ORTHO05D006758 2.6e-23 114.8 166 42.8
Gohir.A06G146950 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.8e-21 108.6 162 42.0
arahy.Tifrunner.gnm1.ann1.SY3941 Arachis hypogaea HOM05D005721 ORTHO05D006758 2.7e-20 104.8 86 64.0
HanXRQChr05g0131511 Helianthus annuus HOM05D005721 ORTHO05D006758 1.8e-16 92.0 104 50.0
arahy.Tifrunner.gnm1.ann1.EXE9LQ Arachis hypogaea HOM05D005721 ORTHO05D006758 6.8e-16 90.1 56 73.2
Glyma.19G071451 Glycine max HOM05D005721 ORTHO05D006758 5.7e-15 87.0 59 72.9
Cfa026500 Carpinus fangiana HOM05D005721 ORTHO05D006758 9.8e-15 86.3 573 21.5
Glyma.09G112900 Glycine max HOM05D005721 ORTHO05D006758 3.7e-14 84.3 101 51.5
MCO06G118 Micromonas commoda HOM05D005721 ORTHO05D006758 5.4e-13 80.5 205 29.8
HanXRQChr09g0276291 Helianthus annuus HOM05D005721 ORTHO05D006758 3.5e-12 77.8 46 80.4
COL.COLO4_30597 Corchorus olitorius HOM05D005721 ORTHO05D006758 3.6e-09 67.8 91 44.0


User provided reference genes

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