Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 3.1e-91 338.6 189 100.0
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 3.9e-25 119.0 189 42.3
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 6.2e-23 111.7 83 68.7
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 1.4e-22 110.5 90 63.3
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 5.3e-22 108.6 95 57.9
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 9.0e-22 107.8 87 62.1
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 3.4e-21 105.9 92 57.6
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 4.5e-21 105.5 85 64.7
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 1.3e-20 104.0 92 59.8
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 1.3e-20 104.0 92 59.8
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 1.7e-20 103.6 78 66.7
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 1.7e-20 103.6 78 66.7
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 2.2e-20 103.2 74 66.2
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 2.2e-20 103.2 74 70.3
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 2.9e-20 102.8 90 61.1
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 2.9e-20 102.8 75 69.3
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 2.9e-20 102.8 76 69.7
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 4.9e-20 102.1 193 36.8
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 4.9e-20 102.1 78 66.7
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 6.4e-20 101.7 88 60.2
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 6.4e-20 101.7 80 63.8
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 6.4e-20 101.7 85 62.4
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 6.4e-20 101.7 78 66.7
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 6.4e-20 101.7 78 66.7
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 8.4e-20 101.3 91 57.1
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 8.4e-20 101.3 84 60.7
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 8.4e-20 101.3 84 60.7
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 1.1e-19 100.9 74 66.2
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 1.1e-19 100.9 74 66.2
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 1.1e-19 100.9 74 66.2
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 1.1e-19 100.9 74 66.2
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 1.1e-19 100.9 74 66.2
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 1.1e-19 100.9 74 66.2
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 1.1e-19 100.9 74 66.2
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 1.1e-19 100.9 79 64.6
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 1.1e-19 100.9 80 65.0
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 1.1e-19 100.9 74 66.2
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 1.1e-19 100.9 70 71.4
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 1.4e-19 100.5 74 66.2
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 1.4e-19 100.5 74 66.2
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 1.4e-19 100.5 74 66.2
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 1.4e-19 100.5 188 38.3
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 1.9e-19 100.1 75 68.0
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 1.9e-19 100.1 74 66.2
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 2.5e-19 99.8 74 64.9
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 2.5e-19 99.8 75 66.7
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 2.5e-19 99.8 91 58.2
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 2.5e-19 99.8 111 52.3
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 3.2e-19 99.4 79 64.6
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 4.2e-19 99.0 80 66.2
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 5.5e-19 98.6 78 65.4
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 5.5e-19 98.6 74 64.9
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 5.5e-19 98.6 76 65.8
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 5.5e-19 98.6 75 68.0
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 5.5e-19 98.6 79 64.6
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 7.1e-19 98.2 75 68.0
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 7.1e-19 98.2 80 63.8
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 7.1e-19 98.2 80 63.8
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 7.1e-19 98.2 80 63.8
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 7.1e-19 98.2 73 68.5
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 7.1e-19 98.2 75 68.0
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 9.3e-19 97.8 91 57.1
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 9.3e-19 97.8 75 65.3
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 9.3e-19 97.8 83 60.2
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 1.2e-18 97.4 75 65.3
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 1.2e-18 97.4 73 65.8
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 1.2e-18 97.4 75 64.0
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 1.6e-18 97.1 98 55.1
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 2.1e-18 96.7 80 62.5
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 2.1e-18 96.7 83 59.0
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 2.7e-18 96.3 74 66.2
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 6.0e-18 95.1 78 62.8
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 6.0e-18 95.1 73 65.8
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 7.9e-18 94.7 78 64.1
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 7.9e-18 94.7 75 64.0
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 7.9e-18 94.7 70 67.1
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 1.0e-17 94.4 73 67.1
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 1.3e-17 94.0 90 54.4
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 1.3e-17 94.0 90 54.4
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 1.8e-17 93.6 75 64.0
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 1.8e-17 93.6 78 60.3
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 2.3e-17 93.2 73 64.4
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 3.0e-17 92.8 75 64.0
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 5.1e-17 92.0 75 62.7
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 8.7e-17 91.3 78 60.3
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 8.7e-17 91.3 75 62.7
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 1.1e-16 90.9 75 62.7
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.1e-16 90.9 75 62.7
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 1.9e-16 90.1 70 65.7
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 2.5e-16 89.7 75 64.0
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 3.3e-16 89.4 75 61.3
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 4.3e-16 89.0 103 48.5
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 7.4e-16 88.2 73 61.6
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 7.4e-16 88.2 72 62.5
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 1.3e-15 87.4 191 37.2
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 1.8e-14 83.6 76 56.6
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 2.4e-14 83.2 78 56.4
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 1.1e-11 74.3 87 51.7
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 1.4e-11 73.9 75 54.7
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 5.5e-11 72.0 68 55.9
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 1.3e-09 67.4 85 50.6
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 3.9e-09 65.9 48 66.7
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 5.1e-09 65.5 52 61.5
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 6.7e-09 65.1 48 62.5
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 8.7e-09 64.7 52 61.5
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 1.1e-08 64.3 53 60.4
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 1.5e-08 63.9 62 51.6
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 1.5e-08 63.9 60 50.0
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 1.5e-08 63.9 50 62.0
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 5.7e-08 62.0 48 60.4
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 7.4e-08 61.6 77 44.2
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 9.7e-08 61.2 46 63.0
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 1.1e-06 57.8 42 66.7
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 1.8e-06 57.0 57 52.6
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 2.4e-06 56.6 53 52.8
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 5.3e-06 55.5 49 55.1


User provided reference genes

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