Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 4.0e-207 724.5 371 100.0
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 1.9e-172 609.4 347 89.9
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 7.1e-172 607.4 347 89.6
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 1.2e-171 606.7 354 87.3
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 2.1e-171 605.9 342 88.9
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 7.9e-171 604.0 348 88.2
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 1.0e-170 603.6 347 87.6
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 3.9e-170 601.7 347 87.3
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 5.1e-170 601.3 347 88.2
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 1.5e-169 599.7 350 86.9
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 2.5e-169 599.0 348 87.9
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 3.3e-169 598.6 354 86.7
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 3.3e-169 598.6 347 86.7
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 7.3e-169 597.4 349 86.5
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 7.3e-169 597.4 349 86.5
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 1.6e-168 596.3 347 87.3
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 2.1e-168 595.9 364 83.2
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 4.8e-168 594.7 347 87.3
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 6.2e-168 594.3 347 86.5
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 1.1e-167 593.6 347 86.5
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 1.1e-167 593.6 347 86.5
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 1.4e-167 593.2 347 86.2
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 1.4e-167 593.2 348 86.2
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 3.1e-167 592.0 348 85.6
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 4.0e-167 591.7 348 85.6
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 4.0e-167 591.7 348 86.8
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 5.3e-167 591.3 347 85.9
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 5.3e-167 591.3 347 86.5
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 5.3e-167 591.3 347 86.5
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 5.3e-167 591.3 347 87.0
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 5.3e-167 591.3 347 87.0
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 6.9e-167 590.9 347 86.7
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 6.9e-167 590.9 346 86.1
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 6.9e-167 590.9 346 86.1
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 6.9e-167 590.9 346 86.1
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 6.9e-167 590.9 347 86.5
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 9.0e-167 590.5 346 87.0
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 1.2e-166 590.1 349 86.0
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 1.5e-166 589.7 347 86.5
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 1.5e-166 589.7 347 85.6
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.0e-166 589.3 349 85.7
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 2.0e-166 589.3 352 85.8
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 3.4e-166 588.6 347 86.7
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 7.6e-166 587.4 349 85.4
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 7.6e-166 587.4 347 86.5
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 7.6e-166 587.4 345 87.2
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 1.3e-165 586.6 347 85.9
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 1.3e-165 586.6 350 86.3
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 1.3e-165 586.6 349 85.4
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 1.7e-165 586.3 347 86.5
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 2.9e-165 585.5 353 84.4
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 2.9e-165 585.5 348 84.8
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 3.8e-165 585.1 347 85.3
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 8.4e-165 583.9 347 86.2
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 1.1e-164 583.6 347 85.9
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 1.1e-164 583.6 347 84.7
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 1.1e-164 583.6 360 83.3
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 1.9e-164 582.8 347 85.6
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.9e-164 582.8 349 85.1
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 1.9e-164 582.8 347 84.7
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 2.4e-164 582.4 345 85.2
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 4.2e-164 581.6 347 84.1
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 9.3e-164 580.5 350 85.1
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 9.3e-164 580.5 347 85.3
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 9.3e-164 580.5 349 84.5
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 1.2e-163 580.1 343 86.3
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 1.6e-163 579.7 357 84.3
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 1.6e-163 579.7 347 85.0
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 2.1e-163 579.3 348 84.2
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 7.9e-163 577.4 347 85.0
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 1.8e-162 576.2 347 85.0
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 8.1e-160 567.4 362 82.6
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 6.0e-155 551.2 350 81.4
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 6.0e-155 551.2 348 81.6
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 6.0e-155 551.2 347 83.0
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 1.0e-154 550.4 347 82.7
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 1.1e-153 547.0 341 83.3
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 1.1e-153 547.0 348 81.6
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 1.9e-153 546.2 346 82.1
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 5.7e-153 544.7 349 79.9
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 3.7e-152 542.0 314 86.3
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 8.2e-152 540.8 321 86.3
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 7.6e-150 534.3 369 76.2
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 1.1e-148 530.4 350 73.4
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 1.1e-145 520.4 348 79.3
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 1.1e-145 520.4 368 68.8
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.1e-145 520.4 307 84.0
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 4.3e-145 518.5 369 75.1
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 8.5e-141 504.2 299 86.6
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 1.4e-140 503.4 333 74.2
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 2.0e-137 493.0 396 67.9
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 1.3e-136 490.3 277 89.2
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 6.9e-135 484.6 322 75.2
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 5.9e-134 481.5 274 87.6
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 1.9e-132 476.5 274 85.8
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 6.1e-131 471.5 318 78.6
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 7.2e-124 448.0 255 87.5
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 4.7e-123 445.3 249 90.4
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 8.0e-115 417.9 294 69.0
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 6.8e-114 414.8 276 78.6
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 7.0e-111 404.8 348 63.5
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 4.7e-107 392.1 231 84.8
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 1.6e-102 377.1 265 72.5
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 4.0e-98 362.5 264 73.9
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 7.0e-95 351.7 259 72.6
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 1.7e-88 330.5 339 49.9
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 3.3e-76 289.7 165 86.1
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 7.6e-73 278.5 182 75.8
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 1.2e-67 261.2 299 53.8
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 1.8e-66 257.3 154 85.7
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 9.9e-57 224.9 134 84.3
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 1.5e-52 211.1 130 85.4
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 9.3e-39 165.2 123 69.1
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.2e-33 148.3 128 65.6
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 2.9e-32 143.7 123 61.8
SHI14427 Sapria himalayana HOM05D000030 ORTHO05D000009 4.6e-22 109.8 112 54.5
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea HOM05D002281 ORTHO05D005599 7.2e-15 85.9 59 72.9
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 7.7e-09 65.9 142 34.5
QL06p040095 Quercus lobata HOM05D002281 ORTHO05D005599 3.2e-07 60.5 77 45.5


User provided reference genes

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