Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0787G204 Amborella trichopoda HOM05D009286 ORTHO05D011130 5.1e-33 143.7 65 100.0
QL06p023574 Quercus lobata HOM05D009286 ORTHO05D011130 1.5e-16 89.0 63 63.5
MBI07_g22395_MAGBIO Magnolia biondii HOM05D009286 ORTHO05D011130 2.5e-16 88.2 63 68.3
Haze_11576 Corylus avellana HOM05D009286 ORTHO05D011130 9.6e-16 86.3 67 62.7
CiPaw.02G067700 Carya illinoinensis HOM05D009286 ORTHO05D011130 1.6e-15 85.5 64 62.5
CiPaw.01G125200 Carya illinoinensis HOM05D009286 ORTHO05D011130 2.8e-15 84.7 66 62.1
Cfa014890 Carpinus fangiana HOM05D009286 ORTHO05D011130 6.3e-15 83.6 67 61.2
Actinidia39956 Actinidia chinensis HOM05D000290 ORTHO05D006586 2.4e-14 81.6 63 60.3
Gohir.D02G031400 Gossypium hirsutum HOM05D009286 ORTHO05D011130 3.1e-14 81.3 67 59.7
Gorai.005G034900 Gossypium raimondii HOM05D009286 ORTHO05D011130 3.1e-14 81.3 67 59.7
Duzib151G0679 Durio zibethinus HOM05D009286 ORTHO05D011130 9.0e-14 79.7 66 57.6
COL.COLO4_20307 Corchorus olitorius HOM05D009286 ORTHO05D011130 1.2e-13 79.3 68 55.9
Manes.03G149800 Manihot esculenta HOM05D009286 ORTHO05D011130 1.2e-13 79.3 64 59.4
Gohir.A02G024000 Gossypium hirsutum HOM05D009286 ORTHO05D011130 1.5e-13 79.0 65 60.0
Gohir.A09G202700 Gossypium hirsutum HOM05D009286 ORTHO05D011130 2.0e-13 78.6 71 52.1
Gohir.D09G196800 Gossypium hirsutum HOM05D009286 ORTHO05D011130 2.0e-13 78.6 71 52.1
Gorai.006G220200 Gossypium raimondii HOM05D009286 ORTHO05D011130 2.0e-13 78.6 71 52.1
Manes.15G051025 Manihot esculenta HOM05D009286 ORTHO05D011130 3.4e-13 77.8 63 60.3
Thecc.04G210000 Theobroma cacao HOM05D009286 ORTHO05D011130 7.6e-13 76.6 65 56.9
Duzib268G0451 Durio zibethinus HOM05D009286 ORTHO05D011130 1.3e-12 75.9 67 56.7
Duzib268G0949 Durio zibethinus HOM05D009286 ORTHO05D011130 1.3e-12 75.9 67 56.7
Potri.001G051300 Populus trichocarpa HOM05D009286 ORTHO05D011130 2.9e-12 74.7 68 55.9
Atru.chr4.1762 Acer truncatum HOM05D009286 ORTHO05D011130 6.5e-12 73.6 67 52.2
Sed0020601 Sechium edule HOM05D009286 ORTHO05D011130 6.5e-12 73.6 64 54.7
TAR633G2369 Trochodendron aralioides HOM05D009286 ORTHO05D011130 1.9e-11 72.0 60 56.7
Oeu063490.1 Olea europaea HOM05D009286 ORTHO05D011130 1.6e-10 68.9 62 53.2
Cpa.g.sc59.104 Carica papaya HOM05D009286 ORTHO05D011130 6.1e-10 67.0 74 52.7
Migut.G00633 Erythranthe guttata HOM05D009286 ORTHO05D011130 7.9e-10 66.6 64 53.1
Potri.003G177200 Populus trichocarpa HOM05D009286 ORTHO05D011130 1.3e-09 65.9 68 50.0
Sabra03G0129800 Salix brachista HOM05D009286 ORTHO05D011130 2.3e-09 65.1 68 50.0
Sp1g03610 Schrenkiella parvula HOM05D008913 ORTHO05D011130 6.7e-09 63.5 65 55.4
Ciclev10006054m.g Citrus clementina HOM05D009286 ORTHO05D011130 1.3e-07 59.3 45 62.2
CARHR004160 Cardamine hirsuta HOM05D008913 ORTHO05D011130 3.7e-07 57.8 64 50.0
CSS0021418 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D006586 1.8e-06 55.5 46 58.7
AL1G14490 Arabidopsis lyrata HOM05D009286 ORTHO05D011130 6.9e-06 53.5 46 56.5


User provided reference genes

Program Settings