Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.1e-153 546.6 285 100.0
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 1.6e-91 340.1 208 71.6
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 4.0e-90 335.5 211 70.1
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 4.0e-90 335.5 208 72.1
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.3e-88 330.5 208 70.7
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.9e-88 329.3 206 70.4
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 4.9e-88 328.6 208 69.7
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 1.4e-87 327.0 224 64.7
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.4e-87 326.2 207 68.1
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 5.4e-87 325.1 208 70.2
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 3.5e-86 322.4 206 70.4
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 7.8e-86 321.2 215 66.5
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 7.8e-86 321.2 206 68.0
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 1.3e-85 320.5 205 69.3
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.7e-85 320.1 214 66.8
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 3.0e-85 319.3 226 64.2
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 2.5e-84 316.2 206 68.0
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.6e-83 313.5 205 67.8
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 6.2e-83 311.6 214 67.3
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 8.1e-83 311.2 208 67.8
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 5.2e-82 308.5 194 70.6
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 5.8e-81 305.1 237 59.9
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 7.1e-79 298.1 205 65.4
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 7.1e-79 298.1 216 62.5
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 9.2e-79 297.7 206 64.1
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.2e-78 297.4 205 64.4
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 4.6e-78 295.4 232 58.6
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 2.3e-77 293.1 208 63.0
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 3.9e-77 292.4 209 61.2
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 6.6e-77 291.6 200 62.0
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 1.1e-76 290.8 212 63.2
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 3.3e-76 289.3 218 61.5
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.6e-75 287.0 216 61.1
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 4.7e-75 285.4 209 60.3
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 6.2e-75 285.0 201 64.2
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.1e-74 284.3 205 62.0
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 2.0e-73 280.0 201 63.2
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 1.1e-71 274.2 208 61.5
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.1e-71 274.2 245 55.1
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 1.9e-71 273.5 212 58.0
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.4e-71 273.1 168 69.6
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 1.2e-70 270.8 224 57.1
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 4.6e-70 268.9 203 61.1
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 3.1e-66 256.1 248 52.4
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 4.0e-66 255.8 210 58.1
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 2.3e-61 240.0 176 58.5
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 3.1e-58 229.6 205 53.7
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 3.1e-58 229.6 166 63.3
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 3.1e-58 229.6 225 48.0
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 6.9e-58 228.4 243 44.4
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 1.3e-53 214.2 136 71.3
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 1.1e-52 211.1 122 70.5
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.4e-50 203.4 132 64.4
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 4.0e-50 202.6 124 66.9
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 2.2e-48 196.8 113 74.3
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 6.5e-48 195.3 205 48.3
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 8.4e-48 194.9 130 61.5
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 1.4e-47 194.1 124 70.2
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.2e-47 193.0 137 59.9
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 9.3e-47 191.4 209 45.0
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 2.7e-46 189.9 143 60.1
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 3.0e-45 186.4 123 65.0
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 2.4e-42 176.8 125 58.4
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 2.6e-41 173.3 106 67.9
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 2.2e-40 170.2 107 68.2
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 6.5e-40 168.7 111 65.8
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.9e-37 159.5 205 42.4
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 5.1e-37 159.1 193 40.9
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 2.0e-36 157.1 112 66.1
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 3.3e-36 156.4 100 67.0
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.3e-35 154.5 104 65.4
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 4.8e-35 152.5 84 77.4
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 9.1e-34 148.3 198 39.9
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.2e-33 147.9 102 63.7
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 2.5e-31 140.2 100 61.0
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 9.4e-31 138.3 116 52.6
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 4.7e-30 136.0 184 39.1
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.4e-26 123.6 192 35.4
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.3e-26 122.5 102 52.0
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 1.2e-25 121.3 197 35.0
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 8.5e-24 115.2 213 32.9
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 4.2e-23 112.8 79 67.1
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 6.1e-22 109.0 73 61.6
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 4.2e-15 86.3 214 29.4
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 6.8e-13 79.0 63 61.9
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 8.8e-13 78.6 123 39.8
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 1.0e-08 65.1 59 57.6
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.3e-08 64.7 51 62.7
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 2.2e-08 63.9 44 68.2
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 1.1e-07 61.6 51 60.8
HPP92_022683 Vanilla planifolia HOM05D007543 ORTHO05D009555 1.1e-07 61.6 122 32.8
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 2.5e-07 60.5 46 54.3
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 2.5e-07 60.5 48 56.2
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 3.2e-07 60.1 46 65.2
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 7.2e-07 58.9 46 63.0
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 7.2e-07 58.9 37 64.9


User provided reference genes

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