Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 0.0e+00 1385.5 711 100.0
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 4.3e-117 426.4 470 53.2
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 9.9e-114 415.2 307 66.8
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 1.2e-111 408.3 307 64.8
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 1.3e-110 404.8 307 63.2
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 1.4e-107 394.8 307 62.9
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 2.2e-105 387.5 361 57.3
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 4.9e-105 386.3 403 53.6
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 6.4e-105 386.0 307 63.2
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 1.4e-104 384.8 548 44.2
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 7.1e-104 382.5 307 63.8
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 1.2e-103 381.7 307 62.5
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 2.1e-103 380.9 441 48.8
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 6.0e-103 379.4 307 61.9
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 1.3e-102 378.3 449 49.0
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 2.3e-102 377.5 307 60.3
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 3.9e-102 376.7 360 55.3
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 8.7e-102 375.6 307 60.3
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 4.3e-101 373.2 307 59.9
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 5.6e-101 372.9 307 61.6
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 9.6e-101 372.1 305 61.6
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 2.1e-100 370.9 307 59.3
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 2.1e-100 370.9 379 52.8
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 4.8e-100 369.8 333 55.0
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 8.1e-100 369.0 307 59.0
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 1.1e-99 368.6 544 42.1
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 1.8e-99 367.9 307 58.3
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 3.1e-99 367.1 362 53.6
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 5.3e-99 366.3 465 46.7
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 6.9e-99 365.9 362 53.0
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 1.2e-98 365.2 307 60.6
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 1.2e-98 365.2 307 57.0
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 1.2e-98 365.2 307 60.9
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.5e-98 364.8 362 52.8
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 2.0e-98 364.4 362 53.0
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 2.6e-98 364.0 376 52.7
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 2.6e-98 364.0 362 52.5
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 3.4e-98 363.6 307 59.6
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 4.5e-98 363.2 373 53.1
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 4.5e-98 363.2 362 52.5
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 5.8e-98 362.8 362 52.2
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 5.8e-98 362.8 394 52.8
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 7.6e-98 362.5 708 37.3
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 1.7e-97 361.3 308 59.4
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 2.2e-97 360.9 455 46.6
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 4.9e-97 359.8 467 46.5
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 6.5e-97 359.4 707 38.2
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 8.4e-97 359.0 466 46.6
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 1.1e-96 358.6 469 45.8
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.4e-96 358.2 307 59.9
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 1.9e-96 357.8 434 47.0
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 1.9e-96 357.8 487 45.4
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 4.2e-96 356.7 307 59.9
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 5.5e-96 356.3 376 51.1
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 4.6e-95 353.2 361 52.6
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 6.0e-95 352.8 384 50.5
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 7.9e-95 352.4 363 49.9
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 1.3e-94 351.7 356 51.4
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 5.1e-94 349.7 307 57.0
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 1.5e-93 348.2 331 52.6
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 1.5e-93 348.2 376 49.2
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 2.5e-93 347.4 307 56.7
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 3.3e-93 347.1 403 50.4
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 3.3e-93 347.1 307 56.7
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 4.3e-93 346.7 307 57.7
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 5.7e-93 346.3 307 57.3
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 9.6e-93 345.5 312 55.8
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 1.3e-92 345.1 308 56.2
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 1.3e-92 345.1 308 56.2
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 1.6e-92 344.7 426 45.3
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 1.6e-92 344.7 308 55.5
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 1.1e-91 342.0 307 55.4
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 4.1e-91 340.1 339 52.2
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 1.5e-90 338.2 307 54.7
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 2.0e-90 337.8 270 63.0
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 1.3e-89 335.1 307 54.4
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 2.2e-89 334.3 362 50.0
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 3.8e-89 333.6 311 55.3
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 5.0e-89 333.2 307 53.1
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 6.5e-89 332.8 413 45.3
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 6.5e-89 332.8 413 45.3
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 8.5e-89 332.4 268 60.8
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 3.2e-88 330.5 333 53.8
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 4.2e-88 330.1 413 45.0
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 4.2e-88 330.1 308 53.2
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 5.5e-88 329.7 307 54.7
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 4.6e-87 326.6 362 48.1
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 1.3e-86 325.1 273 56.4
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 1.8e-86 324.7 367 49.6
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 1.8e-86 324.7 305 55.7
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 1.3e-84 318.5 313 52.4
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 1.6e-84 318.2 314 51.6
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 1.6e-84 318.2 314 51.6
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 2.8e-84 317.4 314 51.6
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 4.8e-84 316.6 716 34.8
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 8.2e-84 315.8 314 51.6
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 3.1e-83 313.9 314 51.6
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 2.0e-82 311.2 321 50.2
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 2.0e-82 311.2 270 57.8
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 1.0e-81 308.9 339 48.4
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 5.0e-81 306.6 339 48.1
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 3.2e-80 303.9 379 44.3
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 9.4e-80 302.4 333 48.3
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 2.6e-77 294.3 849 31.8
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 1.3e-76 292.0 314 47.8
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 5.0e-73 280.0 314 46.8
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 9.4e-72 275.8 207 64.7
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 1.8e-70 271.6 235 61.3
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 2.4e-67 261.2 312 43.9
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 2.4e-67 261.2 353 42.8
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 2.4e-67 261.2 273 46.9
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 1.0e-62 245.7 211 59.2
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 2.4e-59 234.6 201 57.7
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 5.9e-58 229.9 287 43.9
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 1.1e-56 225.7 389 38.3
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 3.4e-37 161.0 125 60.8
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 6.4e-36 156.8 113 64.6
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 8.6e-33 146.4 106 67.0
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 6.4e-28 130.2 128 47.7
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 4.6e-26 124.0 154 47.4
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 3.9e-25 120.9 164 36.6
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 3.9e-25 120.9 149 42.3
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 8.6e-25 119.8 103 56.3
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 1.2e-21 109.4 144 46.5
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 3.4e-21 107.8 91 57.1
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 7.8e-18 96.7 174 32.2
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 2.5e-16 91.7 64 65.6
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 3.3e-16 91.3 86 48.8
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 3.1e-14 84.7 55 72.7
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 5.2e-14 84.0 62 61.3
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 2.0e-13 82.0 80 55.0
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 1.7e-09 68.9 53 62.3
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 1.7e-09 68.9 53 62.3


User provided reference genes

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