Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0787G097 Amborella trichopoda HOM05D000312 ORTHO05D023433 1.2e-208 729.6 363 100.0
ATR0787G110 Amborella trichopoda HOM05D000312 ORTHO05D023433 1.7e-138 496.5 491 57.0
ATR0088G046 Amborella trichopoda HOM05D000312 ORTHO05D023433 2.8e-56 223.4 334 42.2
ATR0088G013 Amborella trichopoda HOM05D000312 ORTHO05D023433 3.9e-50 203.0 329 39.5
ATR0787G075 Amborella trichopoda HOM05D000312 ORTHO05D023433 1.9e-28 131.0 336 32.4
CSS0010062 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 1.1e-12 78.6 357 27.7
CSS0004174 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 1.5e-12 78.2 309 26.9
Cc11_g11150 Coffea canephora HOM05D000312 ORTHO05D000221 7.3e-12 75.9 296 29.1
CSS0001862 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 1.6e-11 74.7 299 26.4
CSS0022857 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 8.0e-11 72.4 298 28.2
CSS0049894 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 1.4e-10 71.6 298 28.2
Lsat_1_v5_gn_8_37720 Lactuca sativa HOM05D000312 ORTHO05D000221 1.8e-10 71.2 294 27.6
Hund25125 Selenicereus undatus HOM05D000312 ORTHO05D000221 1.2e-09 68.6 323 26.3
CSS0015502 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 1.5e-09 68.2 288 26.7
Potri.010G134200 Populus trichocarpa HOM05D000312 ORTHO05D000221 3.4e-09 67.0 328 25.3
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 7.5e-09 65.9 298 27.9
Atru.chr11.1487 Acer truncatum HOM05D000312 ORTHO05D000221 1.7e-08 64.7 304 24.7
Rhsim09G0116800 Rhododendron simsii HOM05D000312 ORTHO05D000221 1.7e-08 64.7 298 25.8
ECA233G4713 Erigeron canadensis HOM05D000312 ORTHO05D000221 4.9e-08 63.2 301 24.9
HanXRQChr12g0365181 Helianthus annuus HOM05D000312 ORTHO05D000221 6.4e-08 62.8 297 25.6
TWI31G1454 Tripterygium wilfordii HOM05D000312 ORTHO05D000221 6.4e-08 62.8 293 25.3
GSVIVG01010160001 Vitis vinifera HOM05D000312 ORTHO05D000221 6.4e-08 62.8 295 26.4
Lj6A770T46 Lonicera japonica HOM05D000312 ORTHO05D000221 8.3e-08 62.4 299 24.7
Manes.06G077200 Manihot esculenta HOM05D000312 ORTHO05D000221 1.9e-07 61.2 303 25.4
Oeu024131.1 Olea europaea HOM05D000312 ORTHO05D000221 2.4e-07 60.8 305 25.9
Thecc.02G317200 Theobroma cacao HOM05D000312 ORTHO05D000221 2.4e-07 60.8 299 24.4
Sed0014773 Sechium edule HOM05D000312 ORTHO05D000221 3.2e-07 60.5 319 25.4
Duzib268G1818 Durio zibethinus HOM05D000312 ORTHO05D000221 9.2e-07 58.9 303 25.1
Prupe.1G299200 Prunus persica HOM05D000312 ORTHO05D000221 9.2e-07 58.9 299 24.7
Sabra10G0103100 Salix brachista HOM05D000312 ORTHO05D000221 9.2e-07 58.9 306 25.2
vmacro10487 Vaccinium macrocarpon HOM05D000312 ORTHO05D000221 9.2e-07 58.9 298 25.2
Eucgr.B03088 Eucalyptus grandis HOM05D000312 ORTHO05D000221 1.2e-06 58.5 328 24.7
COL.COLO4_27737 Corchorus olitorius HOM05D000312 ORTHO05D000221 2.1e-06 57.8 299 23.4
SGA_v2.0_scaffold16G07850 Striga asiatica HOM05D000312 ORTHO05D000221 2.1e-06 57.8 304 26.0
Gorai.013G102700 Gossypium raimondii HOM05D000312 ORTHO05D000221 4.6e-06 56.6 303 24.1
Aqoxy7G01133 Aquilegia oxysepala HOM05D001396 ORTHO05D000493 6.0e-06 56.2 306 25.8
Psat2g096800 Pisum sativum HOM05D000312 ORTHO05D000221 7.8e-06 55.8 296 26.4
PGR102G1862 Punica granatum HOM05D000312 ORTHO05D000221 7.8e-06 55.8 328 22.0


User provided reference genes

Program Settings