Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 9.8e-30 133.3 93 100.0
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 8.6e-18 93.6 93 75.3
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 8.6e-18 93.6 93 75.3
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 6.2e-16 87.4 87 54.0
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 8.9e-15 83.6 93 65.6
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 1.2e-14 83.2 93 65.6
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 1.2e-14 83.2 93 65.6
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 1.5e-14 82.8 84 73.8
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 4.4e-14 81.3 87 70.1
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 9.9e-14 80.1 84 48.8
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 1.3e-13 79.7 87 67.8
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 1.3e-13 79.7 87 67.8
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 6.4e-13 77.4 87 64.4
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 8.4e-13 77.0 84 66.7
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 8.4e-13 77.0 84 66.7
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 8.4e-13 77.0 84 67.9
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.9e-12 75.9 93 53.8
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.2e-12 75.1 87 62.1
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 5.4e-12 74.3 87 48.3
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 7.1e-12 73.9 89 43.8
MBI07_g08902_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 1.2e-11 73.2 90 70.0
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 1.2e-11 73.2 89 40.4
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 2.1e-11 72.4 90 45.6
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 2.1e-11 72.4 90 45.6
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 2.1e-11 72.4 90 45.6
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 2.1e-11 72.4 90 45.6
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 2.1e-11 72.4 90 45.6
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 2.1e-11 72.4 90 45.6
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 2.1e-11 72.4 90 45.6
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 2.1e-11 72.4 90 45.6
Aqoxy5G00093 Aquilegia oxysepala HOM05D005842 ORTHO05D007077 2.7e-11 72.0 90 62.2
MBI07_g42320_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 2.7e-11 72.0 90 72.2
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 6.0e-11 70.9 85 41.2
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 7.8e-11 70.5 86 40.7
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 7.8e-11 70.5 86 44.2
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 1.3e-10 69.7 89 40.4
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.3e-10 69.7 89 39.3
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 1.3e-10 69.7 89 39.3
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.3e-10 69.7 86 40.7
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 1.3e-10 69.7 87 40.2
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 3.0e-10 68.6 86 41.9
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 3.0e-10 68.6 85 42.4
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 3.9e-10 68.2 89 48.3
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 6.6e-10 67.4 86 41.9
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 6.6e-10 67.4 85 42.4
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 6.6e-10 67.4 89 41.6
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 8.7e-10 67.0 72 47.2
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 8.7e-10 67.0 86 41.9
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 8.7e-10 67.0 85 42.4
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.1e-09 66.6 86 40.7
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.5e-09 66.2 86 40.7
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 3.3e-09 65.1 90 42.2
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 4.3e-09 64.7 82 40.2
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 7.3e-09 63.9 90 37.8
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 1.6e-08 62.8 81 61.7
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 2.1e-08 62.4 83 39.8
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 2.1e-08 62.4 86 54.7
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 2.8e-08 62.0 86 57.0
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 3.6e-08 61.6 90 38.9
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 3.6e-08 61.6 90 37.8
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 6.2e-08 60.8 82 64.6
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 6.2e-08 60.8 82 56.1
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 1.4e-07 59.7 87 55.2
HPP92_007288 Vanilla planifolia HOM05D005842 ORTHO05D007077 1.8e-07 59.3 101 55.4
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 2.4e-07 58.9 89 60.7
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 2.4e-07 58.9 89 60.7
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 2.4e-07 58.9 89 60.7
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 2.4e-07 58.9 89 60.7
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.4e-07 58.9 86 37.2
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 4.0e-07 58.2 85 41.2
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 4.0e-07 58.2 85 41.2
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 4.0e-07 58.2 85 37.6
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 6.9e-07 57.4 90 41.1
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 9.0e-07 57.0 71 40.8
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 1.2e-06 56.6 82 42.7
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.5e-06 56.2 90 40.0
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.0e-06 55.8 85 41.2
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 2.0e-06 55.8 80 66.2
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 2.6e-06 55.5 108 42.6
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 2.6e-06 55.5 108 42.6
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 2.6e-06 55.5 108 42.6
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 2.6e-06 55.5 108 42.6
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 4.4e-06 54.7 85 40.0
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 4.4e-06 54.7 90 38.9
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 5.8e-06 54.3 72 59.7
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 5.8e-06 54.3 111 46.8
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 7.6e-06 53.9 72 47.2
Lsat_1_v5_gn_2_41500 Lactuca sativa HOM05D005842 ORTHO05D007077 7.6e-06 53.9 78 65.4
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 9.9e-06 53.5 96 31.2
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 9.9e-06 53.5 93 35.5
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 9.9e-06 53.5 100 35.0


User provided reference genes

Program Settings