Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 6.1e-259 897.1 505 100.0
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 1.7e-91 340.9 554 39.0
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 6.0e-89 332.4 555 38.6
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 1.9e-87 327.4 558 38.0
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 3.3e-87 326.6 515 40.2
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 1.1e-85 321.6 553 36.2
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 1.8e-85 320.9 555 37.8
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 2.4e-85 320.5 557 38.1
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 3.1e-85 320.1 550 36.9
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 4.0e-85 319.7 552 38.2
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 6.9e-85 318.9 560 37.0
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 9.0e-85 318.5 546 40.7
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 1.5e-84 317.8 552 38.4
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 5.8e-84 315.8 543 37.9
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 5.8e-84 315.8 553 37.1
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 1.7e-83 314.3 552 37.0
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.7e-83 314.3 547 41.0
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 1.4e-82 311.2 550 37.6
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 1.9e-82 310.8 546 38.3
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 7.1e-82 308.9 550 40.5
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 1.6e-81 307.8 546 37.9
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 3.5e-81 306.6 456 40.4
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 7.9e-81 305.4 557 36.8
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 1.0e-80 305.1 547 35.3
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 1.3e-80 304.7 568 36.6
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 1.3e-80 304.7 539 37.7
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 3.9e-80 303.1 543 39.4
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 4.3e-79 299.7 563 35.2
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 9.6e-79 298.5 552 35.1
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 1.3e-78 298.1 559 35.1
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 1.3e-78 298.1 550 35.3
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 2.8e-78 297.0 559 35.6
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 3.6e-78 296.6 554 36.5
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 4.8e-78 296.2 545 36.0
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 4.8e-78 296.2 456 41.2
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 4.8e-78 296.2 526 39.2
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 6.2e-78 295.8 545 36.5
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 1.8e-77 294.3 539 38.4
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 1.5e-76 291.2 558 33.9
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 8.4e-75 285.4 552 35.7
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.9e-74 284.3 534 34.8
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 2.4e-74 283.9 450 37.8
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 7.1e-74 282.3 534 34.6
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 9.3e-74 282.0 520 36.7
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 1.3e-72 278.1 553 34.5
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 3.0e-72 276.9 551 32.8
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 3.9e-72 276.6 556 33.3
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 8.7e-72 275.4 555 35.1
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 1.1e-71 275.0 553 32.9
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 4.8e-70 269.6 553 34.5
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 1.8e-69 267.7 557 32.7
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 1.8e-69 267.7 559 32.0
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 3.4e-68 263.5 454 37.4
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.0e-67 261.9 270 48.5
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 1.3e-67 261.5 552 34.2
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 1.7e-67 261.2 562 31.7
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 2.2e-67 260.8 549 33.3
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 2.9e-67 260.4 558 32.8
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 4.9e-67 259.6 557 33.8
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 6.5e-67 259.2 558 32.8
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 1.4e-66 258.1 559 31.8
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 1.9e-66 257.7 565 32.6
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 4.2e-66 256.5 557 33.8
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 4.2e-66 256.5 548 33.4
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 4.2e-66 256.5 551 31.9
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 1.2e-65 255.0 554 33.0
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 1.1e-63 248.4 487 33.7
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 2.9e-59 233.8 232 49.6
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 3.9e-56 223.4 460 32.2
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 1.5e-55 221.5 463 33.0
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 3.3e-55 220.3 531 30.1
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.8e-54 217.2 489 31.7
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 8.2e-54 215.7 489 31.7
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 3.6e-49 200.3 465 31.6
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 6.7e-48 196.1 262 38.5
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 1.1e-45 188.7 476 29.0
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 1.8e-45 188.0 449 30.7
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 3.3e-39 167.2 415 31.8
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 2.7e-33 147.5 476 26.3
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 1.2e-20 105.5 441 24.7
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 1.6e-17 95.1 117 43.6
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 1.7e-06 58.5 550 20.9
CBR_g17901 Chara braunii HOM05D007800 ORTHO05D009881 4.9e-06 57.0 318 23.3
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 4.9e-06 57.0 157 30.6


User provided reference genes

Program Settings