Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 5.1e-204 714.1 350 100.0
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.2e-157 560.1 332 79.2
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.6e-157 559.7 338 79.9
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 8.0e-157 557.4 325 80.3
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 2.3e-156 555.8 332 78.6
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 3.0e-156 555.4 333 79.9
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 3.0e-156 555.4 332 78.9
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 3.9e-156 555.1 332 78.9
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 5.2e-156 554.7 329 79.9
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 6.7e-156 554.3 333 79.9
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 5.7e-155 551.2 337 78.0
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 7.4e-155 550.8 329 79.3
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 9.7e-155 550.4 331 78.5
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 6.3e-154 547.7 336 75.6
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.1e-153 545.4 325 79.7
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 3.1e-153 545.4 332 77.7
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 4.1e-153 545.0 329 78.4
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 7.0e-153 544.3 331 77.9
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 7.0e-153 544.3 331 77.9
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 9.1e-153 543.9 329 77.8
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 9.1e-153 543.9 325 79.7
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 9.1e-153 543.9 333 78.1
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.2e-152 543.5 325 78.8
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.2e-152 543.5 333 77.5
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 1.2e-152 543.5 324 79.9
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.6e-152 543.1 329 78.7
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 3.5e-152 542.0 334 77.8
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 3.5e-152 542.0 326 80.1
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 5.9e-152 541.2 333 77.5
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 7.7e-152 540.8 329 77.5
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 7.7e-152 540.8 333 77.5
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 7.7e-152 540.8 329 78.4
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.0e-151 540.4 330 77.3
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.0e-151 540.4 327 78.6
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.3e-151 540.0 325 79.1
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.7e-151 539.7 333 76.6
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.7e-151 539.7 330 78.5
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 2.9e-151 538.9 344 76.5
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 3.8e-151 538.5 329 78.1
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 3.8e-151 538.5 325 76.9
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 5.0e-151 538.1 333 76.3
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 6.5e-151 537.7 324 78.4
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 1.1e-150 537.0 317 81.4
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.1e-150 537.0 327 77.1
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 1.5e-150 536.6 327 76.8
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 1.9e-150 536.2 333 76.9
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.9e-150 536.2 327 76.8
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 3.2e-150 535.4 333 76.3
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 4.2e-150 535.0 329 77.5
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 7.2e-150 534.3 325 78.2
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 9.4e-150 533.9 339 75.2
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 2.1e-149 532.7 334 77.5
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.1e-149 532.7 327 76.8
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.1e-149 532.7 339 74.0
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.7e-149 532.3 327 76.8
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 2.7e-149 532.3 331 78.5
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 4.7e-149 531.6 328 75.9
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 6.1e-149 531.2 330 76.4
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 6.1e-149 531.2 329 76.9
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.0e-148 530.4 329 76.6
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.0e-148 528.5 325 78.8
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 5.2e-148 528.1 332 72.6
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 6.7e-148 527.7 319 78.4
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 6.7e-148 527.7 339 71.4
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 8.8e-148 527.3 325 78.5
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 8.8e-148 527.3 325 78.5
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 8.8e-148 527.3 325 78.8
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 8.8e-148 527.3 330 76.1
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.2e-147 526.9 329 76.0
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.5e-147 526.6 333 75.4
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 2.6e-147 525.8 325 74.8
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 7.5e-147 524.2 335 72.8
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 1.3e-146 523.5 333 74.8
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 1.7e-146 523.1 333 74.8
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 2.8e-146 522.3 334 73.4
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 3.7e-146 521.9 325 76.9
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 4.8e-146 521.5 334 73.1
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 4.8e-146 521.5 325 75.4
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 4.8e-146 521.5 334 73.1
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 4.8e-146 521.5 325 75.4
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 6.3e-146 521.2 331 73.7
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 6.3e-146 521.2 333 72.7
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 3.1e-145 518.8 333 71.8
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 3.1e-145 518.8 329 74.5
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 5.3e-145 518.1 379 68.1
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 1.2e-144 516.9 335 71.9
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 3.5e-144 515.4 333 71.8
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 5.9e-144 514.6 327 73.7
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 2.2e-143 512.7 331 72.2
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 3.2e-142 508.8 331 73.7
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 2.1e-141 506.1 357 69.2
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 6.1e-141 504.6 371 65.8
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 8.0e-141 504.2 306 77.8
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 2.0e-139 499.6 329 73.6
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.3e-138 496.9 325 73.2
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.7e-138 496.5 299 79.3
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 8.3e-138 494.2 335 71.9
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 3.1e-137 492.3 308 76.6
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.7e-135 486.5 323 72.4
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 6.1e-133 478.0 319 72.7
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 3.0e-132 475.7 324 72.5
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.2e-131 473.8 300 75.0
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 2.6e-131 472.6 358 65.1
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 7.5e-131 471.1 277 81.2
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 9.8e-131 470.7 332 67.8
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 7.8e-128 461.1 329 68.7
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 1.4e-124 450.3 321 67.6
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 6.2e-117 424.9 244 83.2
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.5e-110 403.7 322 64.9
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 9.5e-110 401.0 279 71.0
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 9.9e-99 364.4 216 80.6
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 1.3e-85 320.9 293 53.6
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 2.8e-85 319.7 288 55.2
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 9.0e-84 314.7 319 50.2
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 8.4e-82 308.1 303 55.8
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.8e-79 300.4 185 77.3
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 2.1e-64 250.4 176 71.6
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.5e-49 200.3 175 57.1
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 5.5e-49 199.1 128 71.9
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.0e-39 168.3 113 73.5
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.2e-34 150.6 102 70.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.5e-27 126.3 103 61.2
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.6e-19 101.3 157 38.2
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.6e-19 101.3 106 50.9
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 3.5e-19 100.1 68 66.2
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 3.3e-17 93.6 74 62.2
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 4.1e-12 76.6 54 59.3


User provided reference genes

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