Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0782G053 Amborella trichopoda HOM05D003740 ORTHO05D004611 2.6e-256 888.3 454 100.0
MBI13_g04792_MAGBIO Magnolia biondii HOM05D003740 ORTHO05D004611 3.6e-149 532.3 368 73.4
Eucgr.A02296 Eucalyptus grandis HOM05D003740 ORTHO05D004611 3.0e-148 529.3 366 73.0
CSS0019779 Camellia sinensis var. sinensis HOM05D003740 ORTHO05D004611 8.2e-146 521.2 329 78.4
TWI77G0796 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 1.4e-145 520.4 369 72.9
Actinidia39193 Actinidia chinensis HOM05D003740 ORTHO05D004611 2.4e-145 519.6 346 76.0
Dinv05312 Davidia involucrata HOM05D003740 ORTHO05D004611 2.4e-145 519.6 372 71.5
GSVIVG01033552001 Vitis vinifera HOM05D003740 ORTHO05D004611 2.4e-145 519.6 320 79.4
Ciclev10005020m.g Citrus clementina HOM05D003740 ORTHO05D004611 1.2e-144 517.3 332 77.4
Dinv34246 Davidia involucrata HOM05D003740 ORTHO05D004611 1.2e-144 517.3 366 73.2
Sed0013360 Sechium edule HOM05D003740 ORTHO05D004611 1.2e-144 517.3 350 75.4
TWI74G0940 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 1.2e-144 517.3 353 74.2
Phvul.007G249500 Phaseolus vulgaris HOM05D003740 ORTHO05D004611 2.0e-144 516.5 368 72.3
TWI53G1619 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 2.0e-144 516.5 366 71.9
PGR004G2716 Punica granatum HOM05D003740 ORTHO05D004611 3.4e-144 515.8 348 74.4
VMungo0720G0943 Vigna mungo HOM05D003740 ORTHO05D004611 3.4e-144 515.8 368 72.3
ClCG04G004010 Citrullus lanatus HOM05D003740 ORTHO05D004611 4.5e-144 515.4 368 70.9
Sed0006234 Sechium edule HOM05D003740 ORTHO05D004611 4.5e-144 515.4 338 76.6
MELO3C014202.2 Cucumis melo HOM05D003740 ORTHO05D004611 5.9e-144 515.0 367 71.4
CsaV3_4G027630 Cucumis sativus L. HOM05D003740 ORTHO05D004611 1.3e-143 513.8 367 71.1
TAR636G0750 Trochodendron aralioides HOM05D003740 ORTHO05D004611 1.3e-143 513.8 316 80.1
Manes.08G053600 Manihot esculenta HOM05D003740 ORTHO05D004611 5.0e-143 511.9 366 71.6
Sopen04g008590 Solanum pennellii HOM05D003740 ORTHO05D004611 5.0e-143 511.9 361 72.0
Cfa016754 Carpinus fangiana HOM05D003740 ORTHO05D004611 6.5e-143 511.5 351 74.6
Ah.13g076780 Amaranthus hybridus HOM05D003740 ORTHO05D004611 8.5e-143 511.1 335 75.5
Haze_19750 Corylus avellana HOM05D003740 ORTHO05D004611 1.4e-142 510.4 351 74.4
Lj5g0015883 Lotus japonicus HOM05D003740 ORTHO05D004611 1.9e-142 510.0 344 74.1
Psat6g118200 Pisum sativum HOM05D003740 ORTHO05D004611 4.2e-142 508.8 343 74.6
TPR.G19664 Trifolium pratense HOM05D003740 ORTHO05D004611 4.2e-142 508.8 324 77.8
Lalb_Chr02g0156411 Lupinus albus HOM05D003740 ORTHO05D004611 5.5e-142 508.4 364 70.3
Medtr0012s0090 Medicago truncatula HOM05D003740 ORTHO05D004611 5.5e-142 508.4 335 76.1
Rhsim03G0031000 Rhododendron simsii HOM05D003740 ORTHO05D004611 5.5e-142 508.4 320 78.4
Glyma.10G105900 Glycine max HOM05D003740 ORTHO05D004611 7.2e-142 508.1 320 77.5
Prupe.7G050100 Prunus persica HOM05D003740 ORTHO05D004611 7.2e-142 508.1 361 70.9
SEGI_04340 Sequoiadendron giganteum HOM05D003740 ORTHO05D004611 9.4e-142 507.7 348 73.0
Ca_25790_v3 Cicer arietinum L. HOM05D003740 ORTHO05D004611 1.2e-141 507.3 346 73.1
Medtr3g045150 Medicago truncatula HOM05D003740 ORTHO05D004611 1.2e-141 507.3 335 75.8
Nn6g34910 Nelumbo nucifera HOM05D003740 ORTHO05D004611 1.2e-141 507.3 327 75.8
CiPaw.09G042200 Carya illinoinensis HOM05D003740 ORTHO05D004611 2.1e-141 506.5 346 73.4
Glyma.02G190700 Glycine max HOM05D003740 ORTHO05D004611 2.7e-141 506.1 365 70.7
DCAR_020539 Daucus carota HOM05D003740 ORTHO05D004611 3.6e-141 505.8 347 73.2
Atru.chr1.1193 Acer truncatum HOM05D003740 ORTHO05D004611 4.7e-141 505.4 320 78.1
SGA_v2.0_scaffold105G30359 Striga asiatica HOM05D003740 ORTHO05D004611 4.7e-141 505.4 315 79.7
MD12G1086200 Malus domestica HOM05D003740 ORTHO05D004611 6.1e-141 505.0 360 71.7
QL07p005086 Quercus lobata HOM05D003740 ORTHO05D004611 6.1e-141 505.0 319 78.1
Migut.K00119 Erythranthe guttata HOM05D003740 ORTHO05D004611 1.0e-140 504.2 342 74.6
Duzib128G1723 Durio zibethinus HOM05D003740 ORTHO05D004611 1.4e-140 503.8 351 72.4
Lsat_1_v5_gn_6_15201 Lactuca sativa HOM05D003740 ORTHO05D004611 1.4e-140 503.8 368 71.2
Thecc.05G145300 Theobroma cacao HOM05D003740 ORTHO05D004611 1.4e-140 503.8 351 72.9
EL10Ac3g07158 Beta vulgaris HOM05D003740 ORTHO05D004611 1.8e-140 503.4 364 70.6
BraA05t19226Z Brassica rapa HOM05D003740 ORTHO05D004611 2.3e-140 503.1 327 77.4
Gorai.006G134300 Gossypium raimondii HOM05D003740 ORTHO05D004611 2.3e-140 503.1 320 77.8
Peaxi162Scf00130g01015 Petunia axillaris HOM05D003740 ORTHO05D004611 3.0e-140 502.7 361 70.9
Nn7g37216 Nelumbo nucifera HOM05D003740 ORTHO05D004611 3.9e-140 502.3 315 77.1
Gohir.A09G119800 Gossypium hirsutum HOM05D003740 ORTHO05D004611 5.1e-140 501.9 350 72.9
Rhsim04G0107900 Rhododendron simsii HOM05D003740 ORTHO05D004611 5.1e-140 501.9 316 78.8
Sc13g0001500 Simmondsia chinensis HOM05D003740 ORTHO05D004611 5.1e-140 501.9 347 71.2
Actinidia38142 Actinidia chinensis HOM05D003740 ORTHO05D004611 6.7e-140 501.5 365 71.0
HanXRQChr10g0277771 Helianthus annuus HOM05D003740 ORTHO05D004611 6.7e-140 501.5 323 77.1
AL4G39580 Arabidopsis lyrata HOM05D003740 ORTHO05D004611 8.8e-140 501.1 337 75.7
Carub.0004s2379 Capsella rubella HOM05D003740 ORTHO05D004611 8.8e-140 501.1 353 72.2
Gohir.D09G116000 Gossypium hirsutum HOM05D003740 ORTHO05D004611 8.8e-140 501.1 350 72.9
A05p02310 Brassica napus HOM05D003740 ORTHO05D004611 1.1e-139 500.7 347 73.5
BolC4t21915H Brassica oleracea HOM05D003740 ORTHO05D004611 1.1e-139 500.7 347 73.2
FAN05G1357 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.5e-139 500.4 338 73.7
RcHm_v2.0_Chr3g0484361 Rosa chinensis HOM05D003740 ORTHO05D004611 2.0e-139 500.0 361 70.4
A09p50150 Brassica napus HOM05D003740 ORTHO05D004611 2.6e-139 499.6 343 74.9
BraA09t40467Z Brassica rapa HOM05D003740 ORTHO05D004611 2.6e-139 499.6 343 74.9
Sp4g23760 Schrenkiella parvula HOM05D003740 ORTHO05D004611 2.6e-139 499.6 363 71.3
FAN14G5242 Fragaria x ananassa HOM05D003740 ORTHO05D004611 3.3e-139 499.2 341 72.7
Lalb_Chr21g0316601 Lupinus albus HOM05D003740 ORTHO05D004611 3.3e-139 499.2 352 71.3
THA.LOC104816968 Tarenaya hassleriana HOM05D003740 ORTHO05D004611 3.3e-139 499.2 361 71.2
BcaC02g09904 Brassica carinata HOM05D003740 ORTHO05D004611 7.4e-139 498.0 342 74.3
C04p35340 Brassica napus HOM05D003740 ORTHO05D004611 7.4e-139 498.0 342 74.3
BolC4t25088H Brassica oleracea HOM05D003740 ORTHO05D004611 7.4e-139 498.0 342 74.3
C04p02750 Brassica napus HOM05D003740 ORTHO05D004611 9.7e-139 497.7 347 72.9
CARHR136610 Cardamine hirsuta HOM05D003740 ORTHO05D004611 9.7e-139 497.7 361 71.7
C08p32520 Brassica napus HOM05D003740 ORTHO05D004611 1.3e-138 497.3 348 73.3
FAN09G1292 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.3e-138 497.3 341 72.4
FvH4_6g24760 Fragaria vesca HOM05D003740 ORTHO05D004611 1.7e-138 496.9 341 72.4
MD14G1080600 Malus domestica HOM05D003740 ORTHO05D004611 1.7e-138 496.9 373 69.7
Sabra16G0047800 Salix brachista HOM05D003740 ORTHO05D004611 2.2e-138 496.5 319 75.9
AT2G41490 Arabidopsis thaliana HOM05D003740 ORTHO05D004611 2.8e-138 496.1 362 72.4
BolC8t50867H Brassica oleracea HOM05D003740 ORTHO05D004611 2.8e-138 496.1 348 73.3
THA.LOC104803288 Tarenaya hassleriana HOM05D003740 ORTHO05D004611 2.8e-138 496.1 361 70.9
MSTRG.26143 Avicennia marina HOM05D003740 ORTHO05D004611 1.1e-137 494.2 318 77.0
AT3G57220 Arabidopsis thaliana HOM05D003740 ORTHO05D004611 1.4e-137 493.8 331 75.8
BcaNung06793 Brassica carinata HOM05D003740 ORTHO05D004611 1.4e-137 493.8 347 72.3
Atru.chr6.1381 Acer truncatum HOM05D003740 ORTHO05D004611 1.8e-137 493.4 346 72.5
AL5G38710 Arabidopsis lyrata HOM05D003740 ORTHO05D004611 1.8e-137 493.4 361 71.7
arahy.Tifrunner.gnm1.ann1.0DR8LC Arachis hypogaea HOM05D003740 ORTHO05D004611 2.4e-137 493.0 370 68.1
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 3.1e-137 492.7 308 78.2
PSO384G1999 Papaver somniferum HOM05D003740 ORTHO05D004611 3.1e-137 492.7 349 70.8
Prupe.1G032300 Prunus persica HOM05D003740 ORTHO05D004611 3.1e-137 492.7 361 68.7
Migut.J01706 Erythranthe guttata HOM05D003740 ORTHO05D004611 4.1e-137 492.3 343 73.2
Carub.0005s2403 Capsella rubella HOM05D003740 ORTHO05D004611 5.3e-137 491.9 365 71.5
Potri.006G045700 Populus trichocarpa HOM05D003740 ORTHO05D004611 6.9e-137 491.5 319 75.2
Thhalv10016688m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 9.1e-137 491.1 365 70.7
AUR62026121 Chenopodium quinoa HOM05D003740 ORTHO05D004611 1.5e-136 490.3 337 72.4
unitig_748.g7227 Utricularia gibba HOM05D003740 ORTHO05D004611 1.5e-136 490.3 329 74.5
MSTRG.10801 Avicennia marina HOM05D003740 ORTHO05D004611 2.0e-136 490.0 339 72.9
Oeu006922.2 Olea europaea HOM05D003740 ORTHO05D004611 2.0e-136 490.0 346 72.5
PSO339G5696 Papaver somniferum HOM05D003740 ORTHO05D004611 2.0e-136 490.0 349 70.5
Thhalv10007732m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 2.6e-136 489.6 340 73.5
Solyc04g016520.3 Solanum lycopersicum HOM05D003740 ORTHO05D004611 3.4e-136 489.2 361 69.8
Aa31LG1G23510 Aethionema arabicum HOM05D003740 ORTHO05D004611 4.5e-136 488.8 358 70.4
BraA04t16052Z Brassica rapa HOM05D003740 ORTHO05D004611 4.5e-136 488.8 337 74.8
Potri.016G042100 Populus trichocarpa HOM05D003740 ORTHO05D004611 4.5e-136 488.8 319 74.6
Thhalv10005999m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 5.9e-136 488.4 342 73.1
BcaB02g08329 Brassica carinata HOM05D003740 ORTHO05D004611 7.7e-136 488.0 315 77.5
AUR62024529 Chenopodium quinoa HOM05D003740 ORTHO05D004611 1.0e-135 487.6 364 68.7
arahy.Tifrunner.gnm1.ann1.G7Z7YE Arachis hypogaea HOM05D003740 ORTHO05D004611 1.3e-135 487.3 371 67.7
Lj2A390G27 Lonicera japonica HOM05D003740 ORTHO05D004611 1.7e-135 486.9 364 69.2
FAN02G1973 Fragaria x ananassa HOM05D003740 ORTHO05D004611 2.2e-135 486.5 344 71.2
Hund19125 Selenicereus undatus HOM05D003740 ORTHO05D004611 2.9e-135 486.1 305 77.0
CDE08G1337 Ceratophyllum demersum HOM05D003740 ORTHO05D004611 6.5e-135 485.0 279 86.0
Lj1A1122T44 Lonicera japonica HOM05D003740 ORTHO05D004611 1.4e-134 483.8 339 73.5
PGSC0003DMG400012722 Solanum tuberosum HOM05D003740 ORTHO05D004611 9.4e-134 481.1 361 69.3
RcHm_v2.0_Chr3g0484511 Rosa chinensis HOM05D003740 ORTHO05D004611 2.1e-133 479.9 361 69.0
Aqoxy2G02041 Aquilegia oxysepala HOM05D003740 ORTHO05D004611 1.4e-132 477.2 368 65.8
Duzib106G0923 Durio zibethinus HOM05D003740 ORTHO05D004611 3.0e-132 476.1 302 79.1
Medtr8g446850 Medicago truncatula HOM05D003740 ORTHO05D004611 8.8e-132 474.6 321 74.1
Aa31LG10G12120 Aethionema arabicum HOM05D003740 ORTHO05D004611 2.0e-131 473.4 388 66.0
CSS0009879 Camellia sinensis var. sinensis HOM05D003740 ORTHO05D004611 5.7e-131 471.9 353 70.8
Cc06_g18360 Coffea canephora HOM05D003740 ORTHO05D004611 1.4e-129 467.2 297 79.5
Nitab4.5_0000826g0260 Nicotiana tabacum HOM05D003740 ORTHO05D004611 7.0e-129 464.9 364 66.8
CARHR167400 Cardamine hirsuta HOM05D003740 ORTHO05D004611 9.1e-129 464.5 309 76.1
CANSAT80G1617 Cannabis sativa HOM05D003740 ORTHO05D004611 1.2e-128 464.2 350 66.0
DCAR_016970 Daucus carota HOM05D003740 ORTHO05D004611 6.5e-127 458.4 347 69.5
CAN.G1237.3 Capsicum annuum HOM05D003740 ORTHO05D004611 8.5e-127 458.0 261 85.1
A04p03820 Brassica napus HOM05D003740 ORTHO05D004611 1.1e-126 457.6 343 70.0
SalBow1G2954 Salvia bowleyana HOM05D003740 ORTHO05D004611 2.1e-125 453.4 324 70.7
CANSAT80G1359 Cannabis sativa HOM05D003740 ORTHO05D004611 1.4e-124 450.7 350 64.6
COL.COLO4_21300 Corchorus olitorius HOM05D003740 ORTHO05D004611 9.7e-123 444.5 311 72.7
Os07g0661100 Oryza sativa ssp. japonica HOM05D003740 ORTHO05D004611 2.8e-122 443.0 304 71.1
TPR.G2316 Trifolium pratense HOM05D003740 ORTHO05D004611 7.0e-121 438.3 324 67.9
SMO364G0515 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 7.7e-120 434.9 327 66.7
Zm00001eb110840 Zea mays HOM05D003740 ORTHO05D004611 2.9e-119 433.0 345 65.2
Zm00001eb329870 Zea mays HOM05D003740 ORTHO05D004611 2.9e-119 433.0 325 68.0
Pp3c2_18380 Physcomitrium patens HOM05D003740 ORTHO05D004611 2.3e-116 423.3 374 61.2
vmacro09044 Vaccinium macrocarpon HOM05D003740 ORTHO05D004611 3.0e-116 422.9 241 84.6
BcaC07g40064 Brassica carinata HOM05D003740 ORTHO05D004611 9.8e-115 417.9 248 82.7
TAR633G2274 Trochodendron aralioides HOM05D003740 ORTHO05D004611 1.8e-113 413.7 246 80.9
Mapoly0120s0027 Marchantia polymorpha HOM05D003740 ORTHO05D004611 1.6e-112 410.6 339 61.4
SHI12878 Sapria himalayana HOM05D003740 ORTHO05D004611 3.0e-108 396.4 361 58.2
AagrBONN_evm.TU.Sc2ySwM_344.2027 Anthoceros agrestis HOM05D003740 ORTHO05D004611 5.4e-105 385.6 335 58.2
TPR.G11551 Trifolium pratense HOM05D003740 ORTHO05D004611 2.1e-101 373.6 340 59.7
AUR62004393 Chenopodium quinoa HOM05D003740 ORTHO05D004611 2.2e-98 363.6 316 63.0
CiPaw.10G036600 Carya illinoinensis HOM05D003740 ORTHO05D004611 1.9e-97 360.5 211 81.0
RcHm_v2.0_Chr3g0484421 Rosa chinensis HOM05D003740 ORTHO05D004611 3.3e-94 349.7 299 64.2
AUR62022599 Chenopodium quinoa HOM05D003740 ORTHO05D004611 7.3e-86 322.0 280 61.4
SMO112G0012 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 1.5e-83 314.3 202 76.7
CBR_g48687 Chara braunii HOM05D003740 ORTHO05D004611 3.2e-81 306.6 270 56.7
AagrBONN_evm.TU.Sc2ySwM_368.1663 Anthoceros agrestis HOM05D003740 ORTHO05D004611 3.5e-80 303.1 320 49.1
PRCOL_00006546 Prasinoderma coloniale HOM05D003740 ORTHO05D004611 3.3e-78 296.6 291 54.0
SGA_v2.0_scaffold69G23130 Striga asiatica HOM05D003740 ORTHO05D004611 6.2e-77 292.4 344 51.7
Cre16.g663100 Chlamydomonas reinhardtii HOM05D003740 ORTHO05D004611 4.9e-74 282.7 319 47.3
Sp5g05360 Schrenkiella parvula HOM05D003740 ORTHO05D004611 7.3e-70 268.9 157 83.4
Aqoxy6G01654 Aquilegia oxysepala HOM05D003740 ORTHO05D004611 4.3e-62 243.0 221 57.5
Haze_26500 Corylus avellana HOM05D003740 ORTHO05D004611 5.3e-60 236.1 285 46.7
HPP92_001282 Vanilla planifolia HOM05D003740 ORTHO05D004611 2.4e-57 227.3 214 55.1
SEGI_25729 Sequoiadendron giganteum HOM05D003740 ORTHO05D004611 3.5e-56 223.4 129 82.9
Cfa024885 Carpinus fangiana HOM05D003740 ORTHO05D004611 5.3e-52 209.5 287 42.2
Psat6g050760 Pisum sativum HOM05D003740 ORTHO05D018044 1.5e-51 208.0 120 80.8
MCO05G206 Micromonas commoda HOM05D003740 ORTHO05D004611 6.4e-50 202.6 227 48.9
AagrBONN_evm.TU.Sc2ySwM_117.4057 Anthoceros agrestis HOM05D003740 ORTHO05D004611 1.4e-49 201.4 184 57.6
Cpa.g.sc120.7 Carica papaya HOM05D003740 ORTHO05D004611 5.1e-31 139.8 82 82.9
MBI05_g15360_MAGBIO Magnolia biondii HOM05D003740 ORTHO05D004611 2.2e-26 124.4 69 85.5
Actinidia17677 Actinidia chinensis HOM05D003740 ORTHO05D004611 9.4e-25 119.0 225 40.4
Cpa.g.c37387 Carica papaya HOM05D003740 ORTHO05D004611 4.4e-22 110.2 122 51.6
SMO112G0048 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 6.3e-21 106.3 75 68.0
TPR.G13517 Trifolium pratense HOM05D003740 ORTHO05D027079 7.7e-19 99.4 89 55.1
BNapus_Darmor_BZH_scaffold_38p00040 Brassica napus HOM05D003740 ORTHO05D027079 6.1e-16 89.7 113 48.7
BcaC09g48688 Brassica carinata HOM05D003740 ORTHO05D027079 1.5e-14 85.1 103 49.5
TPR.G40499 Trifolium pratense HOM05D003740 ORTHO05D004611 6.3e-13 79.7 60 61.7
BcaC02g11255 Brassica carinata HOM05D003740 ORTHO05D015230 3.5e-11 73.9 74 54.1


User provided reference genes

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