Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0782G047 Amborella trichopoda HOM05D001263 ORTHO05D001120 7.4e-65 250.4 125 100.0
ATR0661G119 Amborella trichopoda HOM05D001263 ORTHO05D001120 1.8e-31 139.4 118 59.3
ATR0782G065 Amborella trichopoda HOM05D001263 ORTHO05D001120 2.2e-16 89.4 123 43.1
Dinv39039 Davidia involucrata HOM05D001263 ORTHO05D001120 1.2e-11 73.6 134 32.8
Rhsim03G0173800 Rhododendron simsii HOM05D001263 ORTHO05D001120 4.7e-11 71.6 132 37.1
ATR0661G325 Amborella trichopoda HOM05D001263 ORTHO05D001120 6.2e-11 71.2 68 60.3
Gohir.A12G262900 Gossypium hirsutum HOM05D001263 ORTHO05D001120 2.3e-10 69.3 132 34.1
Aqoxy5G03946 Aquilegia oxysepala HOM05D001263 ORTHO05D001120 4.0e-10 68.6 113 37.2
Gorai.008G282400 Gossypium raimondii HOM05D001263 ORTHO05D001120 5.2e-10 68.2 138 32.6
Gohir.D12G263400 Gossypium hirsutum HOM05D001263 ORTHO05D001120 8.9e-10 67.4 138 32.6
MBI11_g37707_MAGBIO Magnolia biondii HOM05D001263 ORTHO05D001120 1.2e-09 67.0 124 35.5
Glyma.10G241400 Glycine max HOM05D001263 ORTHO05D001120 2.0e-09 66.2 137 29.2
Actinidia27418 Actinidia chinensis HOM05D001263 ORTHO05D001120 2.6e-09 65.9 133 33.1
CSS0022137 Camellia sinensis var. sinensis HOM05D001263 ORTHO05D001120 3.4e-09 65.5 136 33.1
ATR0763G102 Amborella trichopoda HOM05D001263 ORTHO05D001120 4.4e-09 65.1 137 35.8
MBI04_g22602_MAGBIO Magnolia biondii HOM05D001263 ORTHO05D001120 5.8e-09 64.7 131 34.4
Rhsim09G0194900 Rhododendron simsii HOM05D001263 ORTHO05D001120 9.9e-09 63.9 133 32.3
Thecc.03G165700 Theobroma cacao HOM05D001263 ORTHO05D001120 9.9e-09 63.9 127 33.1
Oeu042593.1 Olea europaea HOM05D001263 ORTHO05D001120 1.3e-08 63.5 133 30.8
Thecc.03G267000 Theobroma cacao HOM05D001263 ORTHO05D001120 1.3e-08 63.5 133 33.8
unitig_748.g7095 Utricularia gibba HOM05D001263 ORTHO05D001120 1.3e-08 63.5 127 31.5
ATR0782G228 Amborella trichopoda HOM05D001263 ORTHO05D001120 1.7e-08 63.2 133 36.1
Eucgr.D01948 Eucalyptus grandis HOM05D001263 ORTHO05D001120 2.2e-08 62.8 135 31.1
QL12p039031 Quercus lobata HOM05D001263 ORTHO05D001120 2.9e-08 62.4 127 31.5
Duzib068G0864 Durio zibethinus HOM05D001263 ORTHO05D001120 3.7e-08 62.0 131 35.1
Glyma.20G152900 Glycine max HOM05D001263 ORTHO05D001120 3.7e-08 62.0 130 30.0
Gorai.010G053500 Gossypium raimondii HOM05D001263 ORTHO05D001120 3.7e-08 62.0 134 33.6
Dinv28514 Davidia involucrata HOM05D001263 ORTHO05D001120 4.9e-08 61.6 132 34.1
Duzib068G1182 Durio zibethinus HOM05D001263 ORTHO05D001120 1.1e-07 60.5 138 29.7
Hma1.2p1_0371F.1_g138320 Hydrangea macrophylla HOM05D001263 ORTHO05D001120 1.1e-07 60.5 135 29.6
TAR636G2369 Trochodendron aralioides HOM05D001263 ORTHO05D001120 1.1e-07 60.5 137 35.8
VMungo0720G2037 Vigna mungo HOM05D001263 ORTHO05D001120 1.1e-07 60.5 132 31.1
Manes.14G031600 Manihot esculenta HOM05D001263 ORTHO05D001120 1.9e-07 59.7 136 31.6
MD12G1112400 Malus domestica HOM05D001263 ORTHO05D001120 2.4e-07 59.3 142 33.1
vmacro06752 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 3.2e-07 58.9 134 36.6
Aqoxy5G03945 Aquilegia oxysepala HOM05D001263 ORTHO05D001120 4.1e-07 58.5 138 30.4
A02p12130 Brassica napus HOM05D001263 ORTHO05D001120 4.1e-07 58.5 132 33.3
BraA02t06277Z Brassica rapa HOM05D001263 ORTHO05D001120 4.1e-07 58.5 132 33.3
FAN10G4332 Fragaria x ananassa HOM05D001263 ORTHO05D001120 4.1e-07 58.5 146 28.8
Rhsim03G0173900 Rhododendron simsii HOM05D001263 ORTHO05D001120 4.1e-07 58.5 134 30.6
SalBow4G1823 Salvia bowleyana HOM05D001263 ORTHO05D001120 5.4e-07 58.2 141 30.5
Potri.012G132000 Populus trichocarpa HOM05D001263 ORTHO05D001120 7.1e-07 57.8 131 32.8
GSVIVG01018459001 Vitis vinifera HOM05D001263 ORTHO05D001120 9.2e-07 57.4 131 32.8
C02p20230 Brassica napus HOM05D001263 ORTHO05D001120 1.2e-06 57.0 132 33.3
Aa31LG7G12370 Aethionema arabicum HOM05D001263 ORTHO05D001120 1.6e-06 56.6 122 33.6
Aqoxy7G00518 Aquilegia oxysepala HOM05D001263 ORTHO05D001120 1.6e-06 56.6 138 29.7
Ciclev10006639m.g Citrus clementina HOM05D001263 ORTHO05D001120 1.6e-06 56.6 130 35.4
CsaV3_3G016560 Cucumis sativus L. HOM05D001263 ORTHO05D001120 1.6e-06 56.6 130 31.5
vmacro09874 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 1.6e-06 56.6 136 29.4
Atru.chr1.588 Acer truncatum HOM05D001263 ORTHO05D001120 2.1e-06 56.2 135 31.1
COL.COLO4_14215 Corchorus olitorius HOM05D001263 ORTHO05D001120 2.1e-06 56.2 130 30.8
Glyma.16G201400 Glycine max HOM05D001263 ORTHO05D001120 2.1e-06 56.2 135 28.9
SEGI_34052 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 2.1e-06 56.2 137 28.5
BcaC03g14576 Brassica carinata HOM05D001263 ORTHO05D001120 2.7e-06 55.8 132 32.6
COL.COLO4_23806 Corchorus olitorius HOM05D001263 ORTHO05D001120 2.7e-06 55.8 140 30.7
Psat6g202400 Pisum sativum HOM05D001263 ORTHO05D001120 2.7e-06 55.8 138 29.0
PGR042G1285 Punica granatum HOM05D001263 ORTHO05D001120 2.7e-06 55.8 140 30.7
QL12p038958 Quercus lobata HOM05D001263 ORTHO05D001120 2.7e-06 55.8 117 29.9
QL12p038982 Quercus lobata HOM05D001263 ORTHO05D001120 2.7e-06 55.8 117 29.9
SEGI_25056 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 2.7e-06 55.8 137 28.5
THA.LOC104811500 Tarenaya hassleriana HOM05D001263 ORTHO05D001120 2.7e-06 55.8 134 31.3
Haze_13800 Corylus avellana HOM05D001263 ORTHO05D001120 3.5e-06 55.5 133 32.3
MBI04_g21534_MAGBIO Magnolia biondii HOM05D001263 ORTHO05D036565 3.5e-06 55.5 104 38.5
Oeu022531.1 Olea europaea HOM05D001263 ORTHO05D001120 3.5e-06 55.5 130 26.9
Oeu056161.1 Olea europaea HOM05D001263 ORTHO05D001120 3.5e-06 55.5 113 37.2
Oeu056171.1 Olea europaea HOM05D001263 ORTHO05D001120 3.5e-06 55.5 113 37.2
SEGI_01180 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 3.5e-06 55.5 137 27.0
SEGI_32203 Sequoiadendron giganteum HOM05D001263 ORTHO05D000950 3.5e-06 55.5 133 27.1
Haze_13799 Corylus avellana HOM05D001263 ORTHO05D001120 4.6e-06 55.1 129 33.3
FAN01G1135 Fragaria x ananassa HOM05D001263 ORTHO05D001120 4.6e-06 55.1 146 28.8
Phvul.007G064300 Phaseolus vulgaris HOM05D001263 ORTHO05D001120 4.6e-06 55.1 133 29.3
Prupe.2G286100 Prunus persica HOM05D001263 ORTHO05D001120 4.6e-06 55.1 129 31.0
Ciclev10024422m.g Citrus clementina HOM05D001263 ORTHO05D001120 6.0e-06 54.7 122 32.8
FAN03G0198 Fragaria x ananassa HOM05D001263 ORTHO05D001120 6.0e-06 54.7 146 28.8
MBI04_g21537_MAGBIO Magnolia biondii HOM05D001263 ORTHO05D001120 6.0e-06 54.7 118 35.6
SalBow4G3159 Salvia bowleyana HOM05D001263 ORTHO05D001120 6.0e-06 54.7 134 28.4
vmacro22546 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 6.0e-06 54.7 117 31.6
Atru.chr1.585 Acer truncatum HOM05D001263 ORTHO05D001120 7.8e-06 54.3 120 32.5
CSS0004016 Camellia sinensis var. sinensis HOM05D001263 ORTHO05D001120 7.8e-06 54.3 132 31.1
Haze_08993 Corylus avellana HOM05D001263 ORTHO05D001120 7.8e-06 54.3 131 31.3
FAN06G4443 Fragaria x ananassa HOM05D001263 ORTHO05D001120 7.8e-06 54.3 146 28.1
Oeu056169.1 Olea europaea HOM05D001263 ORTHO05D001120 7.8e-06 54.3 113 37.2
Peaxi162Scf00156g00023 Petunia axillaris HOM05D001263 ORTHO05D001120 7.8e-06 54.3 132 31.1
Hund11785 Selenicereus undatus HOM05D001263 ORTHO05D001120 7.8e-06 54.3 129 32.6


User provided reference genes

Program Settings