Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 3.2e-300 1034.2 498 100.0
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.4e-162 577.0 485 57.3
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 7.1e-159 564.7 496 56.5
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.8e-155 552.7 508 55.1
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.6e-155 552.4 508 54.9
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.1e-155 551.2 508 54.1
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.1e-154 550.8 508 55.1
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 1.4e-154 550.4 496 55.0
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-154 549.7 480 56.5
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-154 549.7 508 54.7
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-154 549.7 508 54.9
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-154 549.3 508 54.9
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-154 549.3 508 54.7
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.3e-154 548.5 508 54.9
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 5.3e-154 548.5 505 53.9
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 6.9e-154 548.1 503 53.1
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 1.5e-153 547.0 497 54.1
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 4.4e-153 545.4 490 56.1
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.8e-153 545.0 508 54.7
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.6e-153 544.7 508 54.9
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.9e-153 544.3 507 53.8
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 1.7e-152 543.5 490 54.7
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 3.8e-152 542.3 474 55.3
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 3.2e-151 539.3 492 53.9
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 3.2e-151 539.3 494 53.2
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 7.1e-151 538.1 408 62.3
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 7.1e-151 538.1 500 52.8
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 9.3e-151 537.7 485 55.7
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 9.3e-151 537.7 507 53.5
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 1.2e-150 537.3 477 54.9
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 1.6e-150 537.0 489 53.6
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 2.1e-150 536.6 506 51.8
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 2.7e-150 536.2 475 55.6
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 4.6e-150 535.4 481 55.7
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 6.0e-150 535.0 485 54.4
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 1.7e-149 533.5 484 54.1
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 2.3e-149 533.1 477 53.5
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 1.1e-148 530.8 403 61.3
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.5e-148 530.4 480 53.8
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 1.5e-148 530.4 498 52.4
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 3.3e-148 529.3 461 55.3
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 1.6e-147 526.9 490 53.7
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 2.8e-147 526.2 491 52.3
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 2.8e-147 526.2 473 55.0
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 2.8e-147 526.2 492 54.1
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 3.6e-147 525.8 484 53.5
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 6.2e-147 525.0 481 54.1
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 6.2e-147 525.0 507 50.7
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.4e-146 523.9 495 53.1
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 1.4e-146 523.9 480 53.8
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.4e-146 523.9 486 53.3
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 2.4e-146 523.1 409 60.4
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 2.4e-146 523.1 497 52.7
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 3.1e-146 522.7 467 56.1
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 4.0e-146 522.3 411 59.9
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 6.9e-146 521.5 469 54.4
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 4.5e-145 518.8 404 59.9
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 7.6e-145 518.1 403 59.8
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 1.3e-144 517.3 399 59.4
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 1.3e-144 517.3 408 60.5
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 2.2e-144 516.5 405 59.0
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 4.9e-144 515.4 506 51.8
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 4.9e-144 515.4 409 59.2
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 1.4e-143 513.8 471 53.7
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 1.9e-143 513.5 498 52.6
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 9.3e-143 511.1 392 62.2
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 2.1e-142 510.0 473 53.3
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 3.5e-142 509.2 403 58.6
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 7.9e-142 508.1 487 52.0
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 1.3e-141 507.3 409 58.2
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 6.7e-141 505.0 472 52.8
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 1.9e-140 503.4 406 57.9
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 3.3e-140 502.7 403 58.3
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 4.3e-140 502.3 365 63.6
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 1.4e-138 497.3 396 58.6
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 1.8e-138 496.9 473 51.6
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 3.1e-138 496.1 406 58.6
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 2.9e-136 489.6 488 50.6
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 4.9e-136 488.8 407 56.0
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 6.5e-136 488.4 408 57.1
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 8.4e-136 488.0 448 53.6
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.1e-135 487.6 404 57.2
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 1.9e-135 486.9 377 59.7
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 7.1e-135 485.0 405 56.5
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.5e-132 477.2 428 55.4
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 9.6e-132 474.6 375 58.9
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 6.9e-130 468.4 377 57.8
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 2.0e-129 466.8 360 59.7
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 1.0e-128 464.5 342 62.6
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 3.9e-125 452.6 344 58.7
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 1.3e-123 447.6 471 49.7
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 1.4e-119 434.1 403 53.6
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 3.2e-119 433.0 404 52.5
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 1.5e-103 380.9 410 48.3
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 5.5e-103 379.0 298 57.4
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 1.1e-98 364.8 358 51.4
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 1.0e-93 348.2 295 54.6
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 1.7e-88 330.9 459 41.0
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 4.0e-85 319.7 436 42.9
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 4.9e-75 286.2 207 63.3
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 4.6e-73 279.6 459 37.3
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 7.5e-68 262.3 447 36.2
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 1.4e-50 204.9 158 55.1
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.2e-46 191.8 304 35.9
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.9e-42 177.9 405 30.1
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 2.0e-36 157.9 217 43.8
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 2.1e-33 147.9 330 30.6
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.6e-25 121.7 313 29.1
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 9.6e-23 112.5 95 55.8
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 2.4e-21 107.8 322 29.2
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 1.0e-16 92.4 73 61.6
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 2.6e-12 77.8 78 47.4
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 6.5e-11 73.2 59 55.9


User provided reference genes

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