Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 2.4e-159 565.5 293 100.0
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 2.0e-44 183.7 294 44.9
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 3.2e-42 176.4 266 44.7
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 2.7e-41 173.3 289 44.6
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 1.5e-39 167.5 278 42.8
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 1.5e-39 167.5 275 41.1
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.5e-39 167.5 283 41.7
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 1.5e-39 167.5 273 42.9
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 2.5e-39 166.8 289 41.5
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 4.3e-39 166.0 274 40.9
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 7.4e-39 165.2 281 42.0
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 2.1e-38 163.7 293 38.9
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 2.8e-38 163.3 276 41.7
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 4.8e-38 162.5 283 42.4
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 4.8e-38 162.5 279 41.2
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 8.1e-38 161.8 268 42.9
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 8.1e-38 161.8 299 39.8
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 8.1e-38 161.8 279 41.9
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 1.1e-37 161.4 297 40.4
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 1.4e-37 161.0 272 43.4
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 1.4e-37 161.0 275 42.2
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 1.8e-37 160.6 276 41.3
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 2.4e-37 160.2 298 40.6
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 2.4e-37 160.2 284 40.5
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 2.4e-37 160.2 287 40.1
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 2.4e-37 160.2 275 37.1
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 4.0e-37 159.5 280 40.7
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 4.0e-37 159.5 283 42.0
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 5.3e-37 159.1 289 40.1
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 5.3e-37 159.1 281 40.9
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 5.3e-37 159.1 289 40.1
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 5.3e-37 159.1 273 44.3
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 6.9e-37 158.7 276 40.9
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 1.2e-36 157.9 299 40.8
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 2.6e-36 156.8 282 40.4
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 2.6e-36 156.8 271 41.3
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 3.4e-36 156.4 293 42.0
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 3.4e-36 156.4 281 42.0
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 5.8e-36 155.6 285 37.5
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 1.3e-35 154.5 309 40.1
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 1.3e-35 154.5 286 39.5
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 1.7e-35 154.1 287 39.0
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 2.9e-35 153.3 299 40.1
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 4.9e-35 152.5 288 38.9
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 8.4e-35 151.8 287 42.2
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 8.4e-35 151.8 279 41.9
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 8.4e-35 151.8 285 40.7
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 1.9e-34 150.6 282 38.7
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 7.1e-34 148.7 300 37.7
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 9.3e-34 148.3 270 40.0
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 9.3e-34 148.3 285 39.3
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 1.2e-33 147.9 281 37.7
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 2.1e-33 147.1 281 37.7
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 3.5e-33 146.4 299 36.5
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 6.0e-33 145.6 290 41.4
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 6.0e-33 145.6 292 37.7
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 7.9e-33 145.2 283 38.5
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 7.9e-33 145.2 274 38.0
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 1.3e-32 144.4 284 37.7
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.3e-32 144.4 278 38.8
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 1.3e-32 144.4 278 37.4
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 1.8e-32 144.1 295 39.3
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 3.0e-32 143.3 314 37.9
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 3.0e-32 143.3 308 37.0
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 8.7e-32 141.7 282 39.0
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 1.9e-31 140.6 319 35.4
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 1.9e-31 140.6 291 37.5
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 7.4e-31 138.7 295 40.0
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 1.6e-30 137.5 269 37.5
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 2.8e-30 136.7 317 35.0
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 2.8e-30 136.7 299 36.8
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 1.1e-29 134.8 290 36.9
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 1.1e-29 134.8 264 37.1
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 5.3e-29 132.5 321 35.8
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 2.0e-28 130.6 324 34.0
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 1.3e-27 127.9 290 37.2
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 1.7e-27 127.5 285 34.7
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 3.8e-27 126.3 277 34.3
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.1e-26 124.8 157 49.0
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 9.3e-26 121.7 158 48.7
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 3.5e-25 119.8 162 45.7
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 7.9e-25 118.6 377 31.0
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 2.3e-24 117.1 288 34.0
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 1.1e-23 114.8 155 45.8
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 1.9e-23 114.0 164 45.7
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 2.2e-22 110.5 153 45.1
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 2.8e-22 110.2 167 47.3
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 6.3e-22 109.0 160 43.1
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 3.1e-21 106.7 151 45.0
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 5.3e-21 105.9 308 30.2
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 1.5e-20 104.4 368 29.9
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 3.4e-20 103.2 156 41.7
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.0e-19 101.7 240 39.6
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 1.0e-19 101.7 278 32.0
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 2.9e-19 100.1 154 43.5
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 4.6e-17 92.8 159 40.9
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 6.1e-17 92.4 252 34.9
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 6.1e-17 92.4 215 38.6
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 7.9e-17 92.0 151 38.4
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 1.8e-16 90.9 173 37.6
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 2.3e-16 90.5 245 34.3
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 5.1e-16 89.4 286 28.7
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 2.0e-15 87.4 156 41.7
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 2.5e-15 87.0 193 36.3
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 3.3e-15 86.7 166 38.0
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 8.2e-14 82.0 147 40.1
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 6.9e-13 79.0 53 66.0
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 1.0e-08 65.1 133 38.3
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 2.3e-08 63.9 133 35.3
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 3.7e-06 56.6 135 34.8


User provided reference genes

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