Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0772G143 Amborella trichopoda HOM05D007736 ORTHO05D009783 0.0e+00 1418.3 737 100.0
TAR625G1059 Trochodendron aralioides HOM05D007736 ORTHO05D009783 2.5e-59 234.6 739 31.5
Dinv19331 Davidia involucrata HOM05D007736 ORTHO05D009783 5.1e-28 130.6 496 28.6
Dinv24237 Davidia involucrata HOM05D007736 ORTHO05D009783 8.6e-28 129.8 495 27.5
TAR381G1413 Trochodendron aralioides HOM05D007736 ORTHO05D009783 8.6e-28 129.8 144 50.0
Nn1g06123 Nelumbo nucifera HOM05D007736 ORTHO05D009783 1.6e-26 125.6 190 41.6
ClCG09G014560 Citrullus lanatus HOM05D007736 ORTHO05D009783 8.9e-25 119.8 345 30.1
SEGI_33337 Sequoiadendron giganteum HOM05D007736 ORTHO05D009783 1.2e-24 119.4 547 28.3
Actinidia38961 Actinidia chinensis HOM05D007736 ORTHO05D009783 2.0e-24 118.6 389 27.2
MELO3C028798.2 Cucumis melo HOM05D007736 ORTHO05D009783 3.7e-23 114.4 345 29.0
Eucgr.I02697 Eucalyptus grandis HOM05D007736 ORTHO05D009783 8.4e-23 113.2 346 27.7
Rhsim11G0133400 Rhododendron simsii HOM05D007736 ORTHO05D009783 8.4e-23 113.2 426 29.6
CsaV3_7G022310 Cucumis sativus L. HOM05D007736 ORTHO05D009783 4.1e-22 110.9 345 28.4
vmacro01801 Vaccinium macrocarpon HOM05D007736 ORTHO05D009783 1.2e-21 109.4 403 28.5
Cc02_g21990 Coffea canephora HOM05D007736 ORTHO05D009783 2.7e-21 108.2 350 28.6
PGSC0003DMG400029771 Solanum tuberosum HOM05D007736 ORTHO05D009783 4.6e-21 107.5 371 26.4
Haze_10792 Corylus avellana HOM05D007736 ORTHO05D009783 7.8e-21 106.7 339 28.3
Cfa021836 Carpinus fangiana HOM05D007736 ORTHO05D009783 1.3e-20 105.9 339 28.0
Hund21796 Selenicereus undatus HOM05D007736 ORTHO05D009783 1.3e-20 105.9 379 27.4
FAN09G0667 Fragaria x ananassa HOM05D007736 ORTHO05D009783 3.0e-20 104.8 160 40.6
CiPaw.05G040000 Carya illinoinensis HOM05D007736 ORTHO05D009783 3.9e-20 104.4 339 28.0
MD04G1236600 Malus domestica HOM05D007736 ORTHO05D009783 3.9e-20 104.4 161 37.3
FAN05G0537 Fragaria x ananassa HOM05D007736 ORTHO05D009783 5.1e-20 104.0 152 38.8
Psat1g218640 Pisum sativum HOM05D007736 ORTHO05D009783 5.1e-20 104.0 136 41.2
FAN02G1431 Fragaria x ananassa HOM05D007736 ORTHO05D009783 8.6e-20 103.2 160 40.6
FAN05G0165 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.1e-19 102.8 152 38.8
HanXRQChr16g0514111 Helianthus annuus HOM05D007736 ORTHO05D009783 1.5e-19 102.4 126 39.7
Prupe.7G056800 Prunus persica HOM05D007736 ORTHO05D009783 1.5e-19 102.4 203 34.0
Medtr2g008130 Medicago truncatula HOM05D007736 ORTHO05D009783 1.9e-19 102.1 290 29.7
Aqoxy5G02135 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 2.5e-19 101.7 752 23.8
Sed0025125 Sechium edule HOM05D007736 ORTHO05D009783 2.5e-19 101.7 361 27.4
Solyc01g104790.4 Solanum lycopersicum HOM05D007736 ORTHO05D009783 2.5e-19 101.7 368 27.2
Cpa.g.sc2.48 Carica papaya HOM05D007736 ORTHO05D009783 4.3e-19 100.9 403 27.0
FvH4_6g01062 Fragaria vesca HOM05D000868 ORTHO05D000711 4.3e-19 100.9 152 40.1
Glyma.15G050700 Glycine max HOM05D007736 ORTHO05D009783 5.6e-19 100.5 395 26.6
FAN14G5928 Fragaria x ananassa HOM05D007736 ORTHO05D009783 9.6e-19 99.8 152 39.5
PGR142G3153 Punica granatum HOM05D007736 ORTHO05D009783 1.2e-18 99.4 216 32.9
TWI14G1332 Tripterygium wilfordii HOM05D007736 ORTHO05D009783 1.6e-18 99.0 351 26.8
Lj5P244T47 Lonicera japonica HOM05D007736 ORTHO05D009783 2.1e-18 98.6 425 26.8
TAR381G0297 Trochodendron aralioides HOM05D007736 ORTHO05D009783 2.8e-18 98.2 346 30.1
Phvul.006G209200 Phaseolus vulgaris HOM05D007736 ORTHO05D009783 4.7e-18 97.4 274 28.1
Ah.06g188730 Amaranthus hybridus HOM05D007736 ORTHO05D009783 6.2e-18 97.1 342 27.8
Aqoxy4G00650 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 6.2e-18 97.1 752 23.4
MD12G1255900 Malus domestica HOM05D007736 ORTHO05D009783 1.1e-17 96.3 148 37.2
CAN.G523.104 Capsicum annuum HOM05D007736 ORTHO05D009783 1.4e-17 95.9 127 37.0
AUR62006887 Chenopodium quinoa HOM05D007736 ORTHO05D009783 2.4e-17 95.1 109 43.1
Ciclev10028677m.g Citrus clementina HOM05D007736 ORTHO05D009783 2.4e-17 95.1 112 42.0
Sed0013332 Sechium edule HOM05D007736 ORTHO05D009783 2.4e-17 95.1 339 27.1
Actinidia00233 Actinidia chinensis HOM05D007736 ORTHO05D009783 3.1e-17 94.7 227 31.3
Lsat_1_v5_gn_5_106541 Lactuca sativa HOM05D007736 ORTHO05D009783 3.1e-17 94.7 235 31.1
Ca_00110_v3 Cicer arietinum L. HOM05D007736 ORTHO05D009783 5.2e-17 94.0 325 26.8
Nitab4.5_0000249g0440 Nicotiana tabacum HOM05D007736 ORTHO05D009783 5.2e-17 94.0 412 24.0
QL11p018598 Quercus lobata HOM05D007736 ORTHO05D009783 5.2e-17 94.0 439 24.6
VMungo0540G1970 Vigna mungo HOM05D007736 ORTHO05D009783 5.2e-17 94.0 267 26.6
arahy.Tifrunner.gnm1.ann1.40XV2D Arachis hypogaea HOM05D007736 ORTHO05D009783 6.8e-17 93.6 393 24.7
Lj6g0003665 Lotus japonicus HOM05D007736 ORTHO05D009783 1.2e-16 92.8 162 35.8
Thecc.02G144400 Theobroma cacao HOM05D007736 ORTHO05D009783 1.2e-16 92.8 358 26.5
arahy.Tifrunner.gnm1.ann1.JZ71MD Arachis hypogaea HOM05D007736 ORTHO05D009783 1.5e-16 92.4 393 24.9
MSTRG.27826 Avicennia marina HOM05D007736 ORTHO05D009783 3.4e-16 91.3 162 31.5
Manes.04G057900 Manihot esculenta HOM05D007736 ORTHO05D009783 3.4e-16 91.3 348 28.4
Prupe.6G356600 Prunus persica HOM05D007736 ORTHO05D009783 3.4e-16 91.3 199 32.2
RcHm_v2.0_Chr3g0448601 Rosa chinensis HOM05D007736 ORTHO05D009783 3.4e-16 91.3 154 35.1
Sc16g0009620 Simmondsia chinensis HOM05D007736 ORTHO05D009783 5.8e-16 90.5 242 30.2
Nitab4.5_0014357g0010 Nicotiana tabacum HOM05D007736 ORTHO05D009783 9.9e-16 89.7 380 25.3
Sopen01g047310 Solanum pennellii HOM05D007736 ORTHO05D009783 9.9e-16 89.7 347 27.4
EL10Ac4g09677 Beta vulgaris HOM05D007736 ORTHO05D009783 2.9e-15 88.2 188 33.5
Sabra12G0012700 Salix brachista HOM05D007736 ORTHO05D009783 3.8e-15 87.8 109 37.6
Migut.N01016 Erythranthe guttata HOM05D007736 ORTHO05D009783 8.4e-15 86.7 144 33.3
SEGI_00896 Sequoiadendron giganteum HOM05D015824 ORTHO05D017311 1.1e-14 86.3 167 35.9
Glyma.08G181600 Glycine max HOM05D007736 ORTHO05D009783 1.4e-14 85.9 468 23.7
AUR62000538 Chenopodium quinoa HOM05D007736 ORTHO05D009783 9.3e-14 83.2 340 27.1
DCAR_021830 Daucus carota HOM05D007736 ORTHO05D009783 3.5e-13 81.3 186 32.8
Sabra15G0006300 Salix brachista HOM05D007736 ORTHO05D009783 3.5e-13 81.3 367 26.2
unitig_26.g9583 Utricularia gibba HOM05D007736 ORTHO05D009783 3.5e-13 81.3 134 35.8
COL.COLO4_20877 Corchorus olitorius HOM05D007736 ORTHO05D009783 6.0e-13 80.5 360 23.9
MSTRG.5252 Avicennia marina HOM05D007736 ORTHO05D009783 7.8e-13 80.1 246 26.4
Potri.015G008200 Populus trichocarpa HOM05D007736 ORTHO05D009783 7.8e-13 80.1 354 26.3
CDE02G1981 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 1.0e-12 79.7 209 28.7
Potri.012G020400 Populus trichocarpa HOM05D007736 ORTHO05D009783 6.6e-12 77.0 408 25.0
Zm00001eb382360 Zea mays HOM05D007736 ORTHO05D009783 7.3e-11 73.6 112 37.5
Lalb_Chr20g0123201 Lupinus albus HOM05D007736 ORTHO05D009783 2.1e-10 72.0 142 32.4
SGA_v2.0_scaffold45G17286 Striga asiatica HOM05D007736 ORTHO05D009783 2.8e-10 71.6 164 29.9
Atru.chr6.1122 Acer truncatum HOM05D007736 ORTHO05D009783 3.6e-10 71.2 86 39.5
HanXRQChr10g0289121 Helianthus annuus HOM05D007736 ORTHO05D009783 3.6e-10 71.2 188 28.2
TPR.G19753 Trifolium pratense HOM05D007736 ORTHO05D009783 2.4e-09 68.6 268 24.3
Os06g0468400 Oryza sativa ssp. japonica HOM05D007736 ORTHO05D009783 6.9e-09 67.0 120 35.0
Pp3c20_17850 Physcomitrium patens HOM05D015824 ORTHO05D017311 2.4e-06 58.5 213 30.0
ECA234G2384 Erigeron canadensis HOM05D007736 ORTHO05D009783 3.2e-06 58.2 346 23.4


User provided reference genes

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