Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 2.4e-167 592.0 290 100.0
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 1.2e-97 360.5 279 62.0
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 3.8e-96 355.5 259 64.9
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 5.5e-95 351.7 287 59.2
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 3.6e-94 349.0 265 61.9
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 6.1e-94 348.2 256 62.9
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 1.8e-93 346.7 255 64.7
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 5.1e-93 345.1 279 58.4
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 1.1e-92 344.0 253 62.1
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 3.3e-92 342.4 273 57.1
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 5.7e-92 341.7 287 58.2
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 8.2e-91 337.8 270 57.0
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 1.4e-90 337.0 261 61.7
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 1.8e-90 336.7 272 57.7
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 3.1e-90 335.9 255 62.7
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 5.3e-90 335.1 284 58.5
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 9.1e-90 334.3 274 56.9
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 1.2e-89 334.0 256 59.8
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 7.7e-89 331.3 279 57.0
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 1.0e-88 330.9 267 58.4
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 1.0e-88 330.9 254 59.8
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.2e-88 329.7 256 60.5
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 2.2e-88 329.7 256 60.2
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 3.8e-88 328.9 256 60.5
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 5.0e-88 328.6 279 55.6
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 5.0e-88 328.6 280 57.1
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 8.5e-88 327.8 256 59.8
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.4e-87 327.0 259 59.8
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 1.9e-87 326.6 256 59.4
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 2.5e-87 326.2 266 56.4
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 3.2e-87 325.9 277 56.0
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 4.2e-87 325.5 256 59.0
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 7.2e-87 324.7 256 59.8
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 2.1e-86 323.2 256 60.5
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 2.7e-86 322.8 256 57.8
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 3.6e-86 322.4 256 59.0
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 6.1e-86 321.6 256 58.6
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 6.1e-86 321.6 256 57.0
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 7.9e-86 321.2 257 59.1
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 7.9e-86 321.2 270 57.4
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 1.4e-85 320.5 256 58.6
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 3.0e-85 319.3 287 55.4
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 3.9e-85 318.9 258 57.0
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 8.8e-85 317.8 256 57.8
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 1.1e-84 317.4 256 56.6
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 2.0e-84 316.6 262 58.8
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 2.0e-84 316.6 256 60.5
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 4.4e-84 315.5 256 57.0
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 5.7e-84 315.1 250 59.2
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 2.8e-83 312.8 250 59.2
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 8.2e-83 311.2 261 56.7
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 1.1e-82 310.8 242 59.1
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 1.8e-82 310.1 255 57.3
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 2.4e-82 309.7 250 58.4
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 5.3e-82 308.5 256 59.4
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 7.0e-82 308.1 256 56.2
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 2.0e-81 306.6 242 59.5
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 5.0e-80 302.0 261 55.2
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 5.0e-80 302.0 269 53.5
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 1.2e-78 297.4 260 55.0
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 1.6e-78 297.0 243 58.8
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 2.7e-78 296.2 268 55.2
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 6.1e-78 295.0 240 55.8
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 8.0e-78 294.7 281 53.0
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 1.8e-77 293.5 255 55.3
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 2.3e-77 293.1 256 53.1
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 5.2e-77 292.0 268 54.9
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 7.5e-76 288.1 258 53.5
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 6.3e-75 285.0 239 56.9
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.1e-74 284.3 258 52.7
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 1.4e-74 283.9 219 58.4
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.8e-74 283.5 258 53.1
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.1e-74 282.7 257 53.3
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 9.4e-71 271.2 224 58.9
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 2.7e-70 269.6 398 38.9
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 1.4e-69 267.3 282 46.8
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 8.8e-69 264.6 255 49.0
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 2.8e-67 259.6 240 52.5
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 1.1e-66 257.7 255 50.6
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 2.0e-65 253.4 202 61.4
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 1.0e-64 251.1 205 59.5
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 2.9e-64 249.6 242 50.4
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 1.5e-63 247.3 194 59.3
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 1.5e-63 247.3 195 59.0
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.9e-63 246.9 350 39.1
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 3.6e-62 242.7 299 44.1
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 4.7e-62 242.3 193 60.1
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 3.0e-61 239.6 257 45.5
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 3.7e-59 232.6 195 57.4
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 1.8e-58 230.3 272 44.5
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 7.3e-55 218.4 269 46.8
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 1.6e-54 217.2 171 60.8
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 1.6e-54 217.2 284 44.0
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 3.6e-54 216.1 289 41.9
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 3.0e-40 169.9 125 60.0
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 5.0e-40 169.1 133 63.9
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 6.6e-40 168.7 405 31.4
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 4.3e-39 166.0 265 37.4
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 2.0e-36 157.1 265 34.3
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.9e-34 150.6 168 46.4
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 2.7e-33 146.7 154 49.4
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 3.0e-32 143.3 103 63.1
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 1.4e-29 134.4 103 61.2
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 5.2e-29 132.5 88 65.9
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 1.9e-26 124.0 103 54.4
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 7.8e-25 118.6 256 28.1
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.3e-24 117.9 138 49.3
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 4.7e-22 109.4 80 60.0
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 4.7e-22 109.4 246 29.7
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.4e-18 97.8 62 66.1
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 1.7e-16 90.9 288 26.7
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 3.3e-15 86.7 246 28.0
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 2.4e-13 80.5 64 56.2
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 1.5e-12 77.8 58 55.2
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 4.2e-10 69.7 43 62.8
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 1.0e-08 65.1 39 61.5
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 8.7e-08 62.0 34 64.7
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 2.8e-06 57.0 36 63.9


User provided reference genes

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