Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 2.6e-98 362.1 185 100.0
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 7.4e-69 264.2 174 76.4
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 4.0e-67 258.5 189 69.8
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 6.9e-67 257.7 187 68.4
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.2e-66 256.9 187 69.5
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 4.5e-66 255.0 190 66.8
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 4.5e-66 255.0 178 73.0
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 4.5e-66 255.0 182 70.9
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 5.8e-66 254.6 187 70.6
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 5.8e-66 254.6 187 68.4
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 5.8e-66 254.6 177 72.9
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 5.8e-66 254.6 177 70.6
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 7.6e-66 254.2 175 70.3
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 7.6e-66 254.2 173 72.8
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 7.6e-66 254.2 173 72.8
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 7.6e-66 254.2 173 73.4
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.3e-65 253.4 170 71.8
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.3e-65 253.4 196 65.8
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 1.7e-65 253.1 170 71.8
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 1.7e-65 253.1 178 70.2
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 2.9e-65 252.3 194 67.0
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 3.8e-65 251.9 173 71.7
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 6.4e-65 251.1 192 66.7
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 6.4e-65 251.1 178 71.3
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 8.4e-65 250.8 180 70.6
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 1.1e-64 250.4 176 71.0
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 1.1e-64 250.4 174 71.8
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.1e-64 250.4 173 72.3
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.1e-64 250.4 173 72.3
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.1e-64 250.4 173 72.3
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 1.1e-64 250.4 178 69.7
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 1.4e-64 250.0 175 70.9
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 1.9e-64 249.6 176 72.7
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 1.9e-64 249.6 196 65.8
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 3.2e-64 248.8 177 70.1
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 4.2e-64 248.4 196 64.8
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 4.2e-64 248.4 195 65.6
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 5.5e-64 248.1 180 71.1
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 7.1e-64 247.7 192 68.2
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 9.3e-64 247.3 182 69.2
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 9.3e-64 247.3 181 69.1
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 1.2e-63 246.9 179 69.3
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.2e-63 246.9 176 72.2
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.2e-63 246.9 176 72.2
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.6e-63 246.5 182 68.1
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 2.1e-63 246.1 176 72.2
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 2.7e-63 245.7 176 69.9
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 3.5e-63 245.4 193 63.7
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 3.5e-63 245.4 186 67.2
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 4.6e-63 245.0 176 71.6
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 7.9e-63 244.2 191 64.4
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 7.9e-63 244.2 192 65.6
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 1.3e-62 243.4 187 66.3
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.3e-62 243.4 187 66.3
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.3e-62 243.4 176 70.5
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.8e-62 243.0 179 69.3
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 1.8e-62 243.0 186 66.7
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.3e-62 242.7 187 66.3
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 3.0e-62 242.3 187 66.3
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 6.7e-62 241.1 180 68.3
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 6.7e-62 241.1 176 70.5
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 6.7e-62 241.1 187 65.8
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 8.7e-62 240.7 173 69.9
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 2.5e-61 239.2 177 67.2
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 2.5e-61 239.2 174 69.5
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 3.3e-61 238.8 199 64.8
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 4.3e-61 238.4 201 62.7
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 9.6e-61 237.3 190 66.3
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 9.6e-61 237.3 175 69.7
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 1.3e-60 236.9 167 68.9
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 6.2e-60 234.6 186 64.0
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 1.1e-59 233.8 177 66.7
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 3.1e-59 232.3 174 67.8
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 5.3e-59 231.5 198 63.1
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 6.9e-59 231.1 198 63.1
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 6.9e-59 231.1 198 63.6
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 9.0e-59 230.7 201 63.7
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 9.0e-59 230.7 186 64.0
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 9.0e-59 230.7 186 64.0
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.2e-58 230.3 205 61.5
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 1.5e-58 229.9 203 64.5
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 1.5e-58 229.9 203 64.5
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 1.5e-58 229.9 203 64.5
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 2.6e-58 229.2 201 63.2
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 2.6e-58 229.2 199 63.3
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 1.3e-57 226.9 204 62.7
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 1.3e-57 226.9 206 62.6
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 1.3e-57 226.9 206 62.6
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 1.7e-57 226.5 190 64.2
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 4.9e-57 224.9 201 61.2
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 7.1e-56 221.1 172 65.1
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.8e-54 216.5 170 63.5
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 5.7e-53 211.5 150 71.3
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 1.6e-52 209.9 204 57.8
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 8.2e-52 207.6 165 64.8
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 8.2e-52 207.6 176 63.6
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 1.1e-51 207.2 183 57.4
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.4e-51 206.1 152 67.1
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 2.4e-51 206.1 152 69.7
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.7e-49 199.9 184 56.0
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 2.9e-49 199.1 188 60.1
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 7.4e-45 184.5 178 53.4
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 4.1e-43 178.7 142 66.2
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 1.2e-42 177.2 183 48.6
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 6.3e-36 154.8 103 74.8
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 6.9e-35 151.4 103 73.8
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.2e-34 150.6 170 48.8
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 2.2e-33 146.4 96 72.9
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 1.1e-32 144.1 115 59.1
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 8.2e-28 127.9 168 47.0
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 2.2e-17 93.2 131 40.5
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 1.2e-15 87.4 80 55.0
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.8e-11 73.6 61 59.0
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 2.9e-09 66.2 57 64.9
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 7.2e-08 61.6 51 56.9
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.4e-06 57.4 33 78.8


User provided reference genes

Program Settings