Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 0.0e+00 1112.8 707 100.0
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 6.9e-83 312.8 743 40.4
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 2.2e-73 281.2 756 37.2
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.4e-72 278.5 729 38.0
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 8.2e-68 262.7 732 38.0
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 4.5e-58 230.3 718 36.9
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 6.5e-57 226.5 719 34.2
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 3.0e-54 217.6 719 37.3
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 1.1e-53 215.7 711 34.2
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 2.4e-51 208.0 740 35.3
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 2.0e-50 204.9 741 31.0
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 2.2e-49 201.4 732 29.8
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 5.0e-49 200.3 714 30.8
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 9.4e-48 196.1 708 29.5
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 1.5e-45 188.7 764 33.0
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 2.6e-45 188.0 707 30.4
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 1.3e-44 185.7 704 34.1
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 6.3e-44 183.3 726 31.7
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 6.3e-44 183.3 720 29.7
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 1.4e-43 182.2 760 26.8
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 1.4e-43 182.2 702 31.6
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 7.0e-43 179.9 746 29.6
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 7.7e-42 176.4 707 27.9
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 1.3e-41 175.6 725 26.9
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 4.2e-40 170.6 725 33.1
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 9.4e-40 169.5 700 32.0
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 1.0e-38 166.0 711 34.0
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 1.8e-38 165.2 722 25.5
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 3.0e-38 164.5 730 27.1
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 5.2e-38 163.7 706 31.3
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 1.3e-36 159.1 723 25.4
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 2.8e-36 157.9 723 25.6
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 4.8e-36 157.1 713 34.5
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 2.7e-34 151.4 714 29.8
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 3.5e-34 151.0 699 37.9
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 6.5e-33 146.7 699 35.1
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 8.5e-33 146.4 712 27.9
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 3.2e-32 144.4 733 24.1
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 4.2e-32 144.1 759 30.2
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 4.7e-31 140.6 787 27.7
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 2.0e-29 135.2 720 27.6
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 3.4e-29 134.4 274 32.1
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 7.5e-29 133.3 271 32.1
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 8.3e-28 129.8 326 33.4
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 9.1e-27 126.3 723 28.5
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 7.7e-26 123.2 719 28.0
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 3.8e-25 120.9 722 28.8
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 3.8e-25 120.9 704 31.7
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.1e-24 119.4 719 27.8
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 3.3e-24 117.9 707 31.7
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 5.5e-24 117.1 757 21.8
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 1.6e-23 115.5 732 23.8
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 4.7e-23 114.0 730 30.4
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 3.0e-22 111.3 229 34.5
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 8.9e-22 109.8 223 33.6
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 6.3e-20 103.6 741 28.5
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 9.2e-19 99.8 605 26.4
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 7.3e-16 90.1 74 59.5
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 2.6e-13 81.6 110 43.6
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 5.8e-13 80.5 545 22.8
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 3.0e-09 68.2 52 57.7


User provided reference genes

Program Settings