Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0772G018 Amborella trichopoda HOM05D004716 ORTHO05D005646 3.1e-102 375.2 193 100.0
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 1.7e-36 156.8 210 46.2
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 2.9e-36 156.0 191 51.3
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 6.6e-36 154.8 192 51.6
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 1.5e-35 153.7 191 50.3
Cpa.g.sc21.191 Carica papaya HOM05D004716 ORTHO05D005646 1.9e-35 153.3 193 49.7
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 3.3e-35 152.5 191 49.7
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 9.5e-35 151.0 197 51.3
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 1.6e-34 150.2 198 49.5
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 6.1e-34 148.3 196 48.0
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 6.1e-34 148.3 190 48.9
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 8.0e-34 147.9 213 47.9
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 1.4e-33 147.1 210 45.7
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 1.4e-33 147.1 210 45.7
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 3.0e-33 146.0 192 49.5
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 4.0e-33 145.6 204 46.1
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 1.2e-32 144.1 190 50.0
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.5e-32 143.7 190 48.4
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 1.5e-32 143.7 201 48.3
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 1.5e-32 143.7 199 49.2
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 2.6e-32 142.9 218 45.0
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 2.6e-32 142.9 196 46.9
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 5.7e-32 141.7 189 47.6
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 7.5e-32 141.4 206 44.7
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 7.5e-32 141.4 203 48.3
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.3e-31 140.6 194 51.5
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 1.7e-31 140.2 192 50.0
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 1.7e-31 140.2 208 46.2
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 1.7e-31 140.2 198 49.0
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 1.7e-31 140.2 228 43.9
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 2.2e-31 139.8 193 49.2
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 3.7e-31 139.0 197 48.7
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 3.7e-31 139.0 228 42.5
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 6.3e-31 138.3 212 46.7
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 6.3e-31 138.3 209 46.9
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 8.3e-31 137.9 197 47.7
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 8.3e-31 137.9 194 49.0
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 8.3e-31 137.9 197 48.2
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 1.1e-30 137.5 197 47.7
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 1.4e-30 137.1 191 47.6
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.4e-30 137.1 197 47.7
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 1.8e-30 136.7 206 46.1
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 2.4e-30 136.3 209 46.4
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 3.2e-30 136.0 202 47.0
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 4.1e-30 135.6 195 46.7
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 5.4e-30 135.2 216 44.4
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 5.4e-30 135.2 203 46.3
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 7.0e-30 134.8 197 46.7
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 7.0e-30 134.8 203 46.3
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 7.0e-30 134.8 196 46.4
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 7.0e-30 134.8 207 47.3
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 9.2e-30 134.4 193 47.2
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 9.2e-30 134.4 213 42.7
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 1.2e-29 134.0 199 44.2
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 1.2e-29 134.0 202 49.5
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 1.6e-29 133.7 216 44.9
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 3.5e-29 132.5 194 47.4
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 3.5e-29 132.5 202 45.0
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 4.6e-29 132.1 193 46.6
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 4.6e-29 132.1 194 46.9
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 5.9e-29 131.7 195 46.7
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 5.9e-29 131.7 189 48.7
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 5.9e-29 131.7 213 46.0
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.0e-28 131.0 194 47.9
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 1.0e-28 131.0 194 47.9
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 1.0e-28 131.0 206 46.1
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 1.7e-28 130.2 191 46.1
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 2.3e-28 129.8 193 47.7
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 2.3e-28 129.8 197 47.7
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 2.3e-28 129.8 202 45.0
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 2.9e-28 129.4 193 45.1
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 6.6e-28 128.3 193 44.0
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 6.6e-28 128.3 208 46.2
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 6.6e-28 128.3 229 42.4
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 8.6e-28 127.9 218 42.7
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 1.1e-27 127.5 201 45.3
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 1.5e-27 127.1 229 40.2
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 2.5e-27 126.3 187 43.9
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 2.5e-27 126.3 187 43.9
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 3.3e-27 125.9 202 44.6
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 4.3e-27 125.6 213 39.9
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 5.6e-27 125.2 209 43.1
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 7.3e-27 124.8 216 41.7
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 7.3e-27 124.8 127 53.5
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 1.2e-26 124.0 194 42.8
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 1.2e-26 124.0 194 42.8
Pp3c5_6660 Physcomitrium patens HOM05D004716 ORTHO05D005646 1.2e-26 124.0 219 40.6
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 1.2e-26 124.0 229 40.2
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis HOM05D004716 ORTHO05D005646 2.8e-26 122.9 226 41.2
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 3.6e-26 122.5 196 43.4
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 1.0e-25 120.9 192 43.2
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.8e-25 120.2 194 44.8
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 3.1e-25 119.4 190 42.6
AUR62026717 Chenopodium quinoa HOM05D004716 ORTHO05D005646 2.0e-24 116.7 196 40.8
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 4.4e-24 115.5 203 42.9
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 4.4e-24 115.5 191 41.9
Mapoly0014s0164 Marchantia polymorpha HOM05D004716 ORTHO05D005646 5.8e-24 115.2 226 38.5
Pp3c6_18530 Physcomitrium patens HOM05D004716 ORTHO05D005646 5.8e-24 115.2 219 38.4
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 7.5e-24 114.8 191 44.5
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 7.5e-24 114.8 196 42.3
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 9.8e-24 114.4 206 41.3
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 1.3e-23 114.0 216 38.9
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.2e-23 113.2 191 44.5
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 3.7e-23 112.5 128 53.1
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 4.9e-23 112.1 191 42.9
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 6.4e-23 111.7 192 39.6
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 8.3e-23 111.3 254 35.8
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 7.0e-22 108.2 190 37.4
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 2.7e-21 106.3 206 37.4
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 1.0e-20 104.4 216 37.5
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 1.3e-20 104.0 191 40.3
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 5.0e-20 102.1 192 38.0
VMungo0464G1352 Vigna mungo HOM05D004716 ORTHO05D005646 1.5e-19 100.5 171 42.1
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 2.5e-19 99.8 193 38.3
TPR.G36694 Trifolium pratense HOM05D004716 ORTHO05D005646 7.3e-19 98.2 106 51.9
Sed0004003 Sechium edule HOM05D004716 ORTHO05D005646 1.6e-18 97.1 56 78.6
Zm00001eb422340 Zea mays HOM05D004716 ORTHO05D005646 1.6e-18 97.1 200 38.0
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 1.1e-17 94.4 110 51.8
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 1.1e-17 94.4 185 36.8
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 1.4e-17 94.0 189 36.5
Actinidia10651 Actinidia chinensis HOM05D004716 ORTHO05D005646 5.2e-17 92.0 192 37.0
Ca_25987_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 5.8e-16 88.6 163 41.1
SEGI_31186 Sequoiadendron giganteum HOM05D004716 ORTHO05D005646 2.2e-15 86.7 184 38.6
CBR_g11170 Chara braunii HOM05D004716 ORTHO05D005646 3.7e-15 85.9 60 65.0
Oeu014494.1 Olea europaea HOM05D004716 ORTHO05D005646 5.4e-14 82.0 119 42.9
HanXRQChr10g0277851 Helianthus annuus HOM05D004716 ORTHO05D005646 1.3e-12 77.4 108 48.1
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 2.3e-12 76.6 195 33.3
CSS0021208 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 7.6e-08 61.6 165 32.7
Nn1g06102 Nelumbo nucifera HOM05D004716 ORTHO05D005646 9.2e-06 54.7 28 82.1


User provided reference genes

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