Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0767G265 Amborella trichopoda HOM05D005552 ORTHO05D006743 0.0e+00 1111.3 552 100.0
Aqoxy6G00889 Aquilegia oxysepala HOM05D005552 ORTHO05D006743 1.1e-184 650.6 552 60.0
Thecc.01G050800 Theobroma cacao HOM05D005552 ORTHO05D006743 1.1e-184 650.6 553 59.3
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 1.1e-184 650.6 554 59.6
FAN28G0665 Fragaria x ananassa HOM05D005552 ORTHO05D006743 7.1e-184 647.9 553 58.8
FvH4_1g15480 Fragaria vesca HOM05D005552 ORTHO05D006743 1.6e-183 646.7 553 58.6
FAN26G2590 Fragaria x ananassa HOM05D005552 ORTHO05D006743 3.5e-183 645.6 553 58.6
PSO541G0461 Papaver somniferum HOM05D005552 ORTHO05D006743 4.6e-183 645.2 552 58.2
Dinv39890 Davidia involucrata HOM05D005552 ORTHO05D006743 1.0e-182 644.0 553 59.5
Gohir.D11G196500 Gossypium hirsutum HOM05D005552 ORTHO05D006743 3.0e-182 642.5 553 57.9
FAN19G0212 Fragaria x ananassa HOM05D005552 ORTHO05D006743 8.6e-182 641.0 553 58.0
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 1.5e-181 640.2 553 58.6
Gorai.007G210400 Gossypium raimondii HOM05D005552 ORTHO05D006743 5.6e-181 638.3 553 57.7
PSO675G7200 Papaver somniferum HOM05D005552 ORTHO05D006743 1.6e-180 636.7 552 57.4
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 3.6e-180 635.6 553 58.4
CDE04G2042 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 1.4e-179 633.6 553 59.0
RcHm_v2.0_Chr2g0104711 Rosa chinensis HOM05D005552 ORTHO05D006743 5.2e-179 631.7 554 57.9
MD15G1279300 Malus domestica HOM05D005552 ORTHO05D006743 1.2e-178 630.6 555 58.6
vmacro21371 Vaccinium macrocarpon HOM05D005552 ORTHO05D006743 7.6e-178 627.9 552 56.3
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 1.3e-177 627.1 555 58.4
Prupe.7G138000 Prunus persica HOM05D005552 ORTHO05D006743 1.3e-177 627.1 555 57.5
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 8.4e-177 624.4 552 57.6
Sopen01g043680 Solanum pennellii HOM05D005552 ORTHO05D006743 3.2e-176 622.5 552 56.9
Glyma.01G183800 Glycine max HOM05D005552 ORTHO05D006743 7.1e-176 621.3 571 55.5
Cc02_g34610 Coffea canephora HOM05D005552 ORTHO05D006743 9.2e-176 620.9 552 57.2
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea HOM05D005552 ORTHO05D006743 1.2e-175 620.5 552 57.2
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 1.2e-175 620.5 553 57.9
Actinidia12065 Actinidia chinensis HOM05D005552 ORTHO05D006743 1.0e-174 617.5 553 57.1
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 1.3e-174 617.1 553 57.1
VMungo1215G1500 Vigna mungo HOM05D005552 ORTHO05D006743 1.9e-173 613.2 552 57.1
CAN.G1273.15 Capsicum annuum HOM05D005552 ORTHO05D006743 9.6e-173 610.9 554 56.7
Cfa003976 Carpinus fangiana HOM05D005552 ORTHO05D006743 1.6e-172 610.1 556 57.4
Lj4C139G4 Lonicera japonica HOM05D005552 ORTHO05D006743 1.6e-172 610.1 556 57.6
TWI09G0520 Tripterygium wilfordii HOM05D005552 ORTHO05D006743 2.8e-172 609.4 552 55.6
Solyc01g100190.4 Solanum lycopersicum HOM05D005552 ORTHO05D006743 3.6e-172 609.0 553 56.1
Rhsim01G0119100 Rhododendron simsii HOM05D005552 ORTHO05D006743 8.1e-172 607.8 553 56.1
Sc16g0001610 Simmondsia chinensis HOM05D005552 ORTHO05D006743 2.4e-171 606.3 552 56.3
Cpa.g.sc6.396 Carica papaya HOM05D005552 ORTHO05D006743 4.0e-171 605.5 552 55.4
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 5.2e-171 605.1 552 55.8
PGSC0003DMG400024733 Solanum tuberosum HOM05D005552 ORTHO05D006743 8.9e-171 604.4 553 56.1
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 8.9e-171 604.4 552 56.0
ECA232G0422 Erigeron canadensis HOM05D005552 ORTHO05D006743 4.9e-169 598.6 553 55.2
Psat2g165040 Pisum sativum HOM05D005552 ORTHO05D006743 6.4e-169 598.2 553 56.1
PGR119G0642 Punica granatum HOM05D005552 ORTHO05D006743 1.4e-168 597.0 553 56.4
MD02G1166800 Malus domestica HOM05D005552 ORTHO05D006743 1.9e-168 596.7 543 56.4
CSS0032711 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 4.2e-168 595.5 551 56.3
Ca_24792_v3 Cicer arietinum L. HOM05D005552 ORTHO05D006743 9.3e-168 594.3 552 54.7
QL06p042750 Quercus lobata HOM05D005552 ORTHO05D006743 1.6e-167 593.6 552 56.3
CANSAT64G0631 Cannabis sativa HOM05D005552 ORTHO05D006743 4.6e-167 592.0 552 54.5
Medtr5g017970 Medicago truncatula HOM05D005552 ORTHO05D006743 6.0e-167 591.7 554 56.0
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 1.0e-166 590.9 553 53.7
Eucgr.I00976 Eucalyptus grandis HOM05D005552 ORTHO05D006743 2.3e-166 589.7 553 55.0
Os03g0240900 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 5.1e-166 588.6 553 54.6
Haze_15444 Corylus avellana HOM05D005552 ORTHO05D006743 8.7e-166 587.8 563 54.0
Lj2g0010083 Lotus japonicus HOM05D005552 ORTHO05D006743 3.3e-165 585.9 553 54.4
Lj6g0016933 Lotus japonicus HOM05D005552 ORTHO05D006743 4.3e-165 585.5 552 54.3
Nitab4.5_0002715g0120 Nicotiana tabacum HOM05D005552 ORTHO05D006743 9.6e-165 584.3 582 52.2
SEGI_18564 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 3.6e-164 582.4 554 54.0
Lalb_Chr05g0213171 Lupinus albus HOM05D005552 ORTHO05D006743 9.0e-163 577.8 553 53.5
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 1.2e-162 577.4 518 56.8
Sed0018600 Sechium edule HOM05D005552 ORTHO05D006743 1.5e-162 577.0 552 54.2
ClCG01G016650 Citrullus lanatus HOM05D005552 ORTHO05D006743 2.6e-162 576.2 551 53.0
MELO3C007542.2 Cucumis melo HOM05D005552 ORTHO05D006743 4.4e-162 575.5 553 53.0
Phvul.002G021300 Phaseolus vulgaris HOM05D005552 ORTHO05D006743 9.9e-162 574.3 518 56.0
AUR62003843 Chenopodium quinoa HOM05D005552 ORTHO05D006743 2.2e-161 573.2 553 53.0
MSTRG.5133 Avicennia marina HOM05D005552 ORTHO05D006743 3.8e-161 572.4 556 53.4
Lsat_1_v5_gn_4_168700 Lactuca sativa HOM05D005552 ORTHO05D006743 6.4e-161 571.6 555 52.8
HanXRQChr14g0430701 Helianthus annuus HOM05D005552 ORTHO05D006743 1.1e-160 570.9 557 53.1
Zm00001eb030410 Zea mays HOM05D005552 ORTHO05D006743 3.2e-160 569.3 551 52.6
AUR62001963 Chenopodium quinoa HOM05D005552 ORTHO05D006743 2.7e-159 566.2 553 52.6
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea HOM05D005552 ORTHO05D006743 3.9e-158 562.4 552 53.1
Hund16313 Selenicereus undatus HOM05D005552 ORTHO05D006743 1.1e-157 560.8 552 53.4
CARHR245320 Cardamine hirsuta HOM05D005552 ORTHO05D006743 3.6e-156 555.8 553 52.4
AT4G37190 Arabidopsis thaliana HOM05D005552 ORTHO05D006743 4.8e-156 555.4 554 52.2
AL7G13990 Arabidopsis lyrata HOM05D005552 ORTHO05D006743 2.4e-155 553.1 554 51.4
Carub.0007s0338 Capsella rubella HOM05D005552 ORTHO05D006743 3.1e-155 552.7 555 51.7
HPP92_017765 Vanilla planifolia HOM05D005552 ORTHO05D006743 3.1e-155 552.7 551 51.4
Sp7g34600 Schrenkiella parvula HOM05D005552 ORTHO05D006743 6.9e-155 551.6 554 52.0
SGA_v2.0_scaffold36G14364 Striga asiatica HOM05D005552 ORTHO05D006743 2.2e-153 546.6 582 50.5
Peaxi162Scf00073g00015 Petunia axillaris HOM05D005552 ORTHO05D006743 2.9e-153 546.2 508 55.5
Aa31LG6G13810 Aethionema arabicum HOM05D005552 ORTHO05D006743 2.4e-152 543.1 553 50.6
CsaV3_6G043060 Cucumis sativus L. HOM05D005552 ORTHO05D006743 4.2e-152 542.3 520 53.7
Manes.16G089500 Manihot esculenta HOM05D005552 ORTHO05D006743 4.2e-152 542.3 500 57.2
Sopen01g043710 Solanum pennellii HOM05D005552 ORTHO05D006743 6.7e-150 535.0 476 57.1
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 3.3e-149 532.7 581 49.2
Thhalv10024834m.g Eutrema salsugineum HOM05D005552 ORTHO05D006743 2.6e-146 523.1 555 50.3
DCAR_010923 Daucus carota HOM05D005552 ORTHO05D006743 9.3e-144 514.6 681 43.3
BcaNung03946 Brassica carinata HOM05D005552 ORTHO05D006743 7.9e-143 511.5 550 49.1
C07p62120 Brassica napus HOM05D005552 ORTHO05D006743 8.7e-142 508.1 552 48.4
BolC7t46629H Brassica oleracea HOM05D005552 ORTHO05D006743 8.7e-142 508.1 552 48.4
A03p64710 Brassica napus HOM05D005552 ORTHO05D006743 1.5e-141 507.3 553 48.3
BraA03t15535Z Brassica rapa HOM05D005552 ORTHO05D006743 1.5e-141 507.3 553 48.3
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 4.3e-141 505.8 443 57.6
BcaNung04273 Brassica carinata HOM05D005552 ORTHO05D006743 7.4e-141 505.0 552 48.4
TAR628G0695 Trochodendron aralioides HOM05D005552 ORTHO05D006743 1.7e-137 493.8 407 63.1
Nn6g32078 Nelumbo nucifera HOM05D005552 ORTHO05D006743 5.1e-134 482.3 406 61.8
CDE06G0261 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 4.6e-127 459.1 465 54.0
FvH4_5g33502 Fragaria vesca HOM05D005552 ORTHO05D006743 3.9e-126 456.1 498 49.8
Oeu035482.1 Olea europaea HOM05D005552 ORTHO05D006743 2.2e-124 450.3 390 57.9
Os12g0586400 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 1.5e-122 444.1 558 45.0
Gohir.A11G189700 Gossypium hirsutum HOM05D005552 ORTHO05D006743 1.6e-119 434.1 362 59.7
FAN18G3771 Fragaria x ananassa HOM05D005552 ORTHO05D006743 4.5e-114 416.0 365 57.8
Mapoly0024s0139 Marchantia polymorpha HOM05D005552 ORTHO05D006743 2.2e-113 413.7 582 40.5
TAR376G0305 Trochodendron aralioides HOM05D005552 ORTHO05D006743 3.6e-111 406.4 418 54.1
Pp3c2_14950 Physcomitrium patens HOM05D005552 ORTHO05D006743 3.0e-110 403.3 576 42.2
SMO358G0218 Selaginella moellendorffii HOM05D005552 ORTHO05D006743 9.4e-104 381.7 552 40.9
Atru.chr3.424 Acer truncatum HOM05D005552 ORTHO05D006743 2.0e-90 337.4 335 53.1
HanXRQChr04g0119851 Helianthus annuus HOM05D005552 ORTHO05D006743 4.0e-86 323.2 274 58.8
FAN08G3227 Fragaria x ananassa HOM05D005552 ORTHO05D006743 1.1e-83 315.1 373 46.9
unitig_26.g9473 Utricularia gibba HOM05D005552 ORTHO05D006743 1.2e-61 241.9 245 52.2
CBR_g38209 Chara braunii HOM05D005552 ORTHO05D006743 2.4e-54 217.6 526 29.8
unitig_26.g9472 Utricularia gibba HOM05D005552 ORTHO05D006743 6.0e-50 203.0 285 42.5
Atru.chr2.470 Acer truncatum HOM05D005552 ORTHO05D006743 5.6e-48 196.4 164 61.6
HanXRQChr04g0119841 Helianthus annuus HOM05D005552 ORTHO05D006743 4.2e-43 180.3 212 47.2
Atru.chr3.423 Acer truncatum HOM05D005552 ORTHO05D006743 1.1e-38 165.6 158 53.8
Psat4g201960 Pisum sativum HOM05D005552 ORTHO05D006743 3.1e-30 137.5 133 55.6
arahy.Tifrunner.gnm1.ann1.S73BBB Arachis hypogaea HOM05D005552 ORTHO05D006743 3.4e-29 134.0 221 39.4
SHI23011 Sapria himalayana HOM05D005552 ORTHO05D006743 1.7e-28 131.7 152 46.1
SHI23015 Sapria himalayana HOM05D005552 ORTHO05D006743 5.5e-27 126.7 126 49.2
MCO05G662 Micromonas commoda HOM05D005552 ORTHO05D006743 1.6e-26 125.2 405 25.4
Psat1g136760 Pisum sativum HOM05D005552 ORTHO05D006743 8.5e-20 102.8 143 42.0
Cre01.g043700 Chlamydomonas reinhardtii HOM05D005552 ORTHO05D006743 1.4e-19 102.1 385 24.9
TAR376G0458 Trochodendron aralioides HOM05D005552 ORTHO05D006743 1.3e-17 95.5 73 63.0
arahy.Tifrunner.gnm1.ann1.ENA0P5 Arachis hypogaea HOM05D005552 ORTHO05D006743 3.9e-17 94.0 76 61.8
Cfa026632 Carpinus fangiana HOM05D005552 ORTHO05D006743 9.7e-16 89.4 451 23.3
C01p02170 Brassica napus HOM05D005552 ORTHO05D006743 2.2e-15 88.2 115 41.7
BolC1t00209H Brassica oleracea HOM05D005552 ORTHO05D006743 2.2e-15 88.2 115 41.7
Psat5g241560 Pisum sativum HOM05D005552 ORTHO05D006743 5.9e-13 80.1 90 45.6
CSS0040680 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 7.7e-13 79.7 74 52.7
Ah.11g041060 Amaranthus hybridus HOM05D005552 ORTHO05D006743 3.2e-11 74.3 51 62.7
CSS0023439 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 7.2e-11 73.2 74 51.4
Peaxi162Scf00073g00115 Petunia axillaris HOM05D005552 ORTHO05D006743 1.2e-10 72.4 55 58.2
SEGI_06310 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 1.2e-10 72.4 50 60.0
FvH4_5g33501 Fragaria vesca HOM05D005552 ORTHO05D006743 4.7e-10 70.5 45 64.4
SHI23013 Sapria himalayana HOM05D001839 ORTHO05D001867 2.3e-09 68.2 70 52.9
Cpa.g.sc6.394 Carica papaya HOM05D005552 ORTHO05D006743 4.1e-06 57.4 117 34.2


User provided reference genes

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