Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 4.5e-49 197.6 98 100.0
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 1.2e-17 93.2 72 66.7
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 1.2e-17 93.2 72 66.7
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 1.2e-17 93.2 53 83.0
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 2.0e-17 92.4 47 85.1
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 2.6e-17 92.0 48 83.3
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 4.5e-17 91.3 52 76.9
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 4.5e-17 91.3 49 81.6
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 4.5e-17 91.3 84 58.3
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 4.5e-17 91.3 48 83.3
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 5.9e-17 90.9 51 76.5
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 5.9e-17 90.9 48 81.2
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 7.7e-17 90.5 47 83.0
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 7.7e-17 90.5 48 81.2
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 7.7e-17 90.5 47 83.0
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 1.0e-16 90.1 73 61.6
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 1.3e-16 89.7 47 78.7
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 1.7e-16 89.4 85 55.3
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 1.7e-16 89.4 76 59.2
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 2.2e-16 89.0 55 76.4
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 2.9e-16 88.6 47 80.9
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 2.9e-16 88.6 62 66.1
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 3.8e-16 88.2 47 83.0
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 3.8e-16 88.2 47 83.0
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 5.0e-16 87.8 67 67.2
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 5.0e-16 87.8 78 59.0
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 5.0e-16 87.8 48 81.2
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 5.0e-16 87.8 48 79.2
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 6.5e-16 87.4 84 58.3
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 6.5e-16 87.4 51 78.4
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 6.5e-16 87.4 47 83.0
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 8.5e-16 87.0 46 82.6
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 8.5e-16 87.0 46 82.6
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 8.5e-16 87.0 48 79.2
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 1.5e-15 86.3 47 80.9
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 1.5e-15 86.3 51 76.5
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 1.9e-15 85.9 47 78.7
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 1.9e-15 85.9 47 78.7
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 1.9e-15 85.9 47 78.7
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 1.9e-15 85.9 47 78.7
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 1.9e-15 85.9 47 78.7
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 1.9e-15 85.9 47 78.7
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 1.9e-15 85.9 47 78.7
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 1.9e-15 85.9 47 78.7
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 2.5e-15 85.5 47 78.7
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 2.5e-15 85.5 47 78.7
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 2.5e-15 85.5 47 78.7
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 3.2e-15 85.1 77 59.7
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 3.2e-15 85.1 51 72.5
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 4.2e-15 84.7 47 76.6
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 4.2e-15 84.7 47 76.6
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 4.2e-15 84.7 47 76.6
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 4.2e-15 84.7 47 76.6
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 4.2e-15 84.7 47 76.6
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 4.2e-15 84.7 47 76.6
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 4.2e-15 84.7 47 76.6
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 4.2e-15 84.7 48 75.0
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 5.5e-15 84.3 47 80.9
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 5.5e-15 84.3 48 77.1
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 7.2e-15 84.0 54 68.5
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 9.4e-15 83.6 48 75.0
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 9.4e-15 83.6 54 66.7
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 1.2e-14 83.2 49 77.6
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 1.2e-14 83.2 47 74.5
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 1.2e-14 83.2 71 59.2
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 1.2e-14 83.2 63 63.5
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 1.6e-14 82.8 47 76.6
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 1.6e-14 82.8 47 76.6
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 1.6e-14 82.8 48 75.0
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 1.6e-14 82.8 53 75.5
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 1.6e-14 82.8 47 76.6
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 2.1e-14 82.4 63 63.5
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 2.1e-14 82.4 63 63.5
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 2.7e-14 82.0 54 66.7
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 2.7e-14 82.0 63 63.5
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 3.6e-14 81.6 46 78.3
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 3.6e-14 81.6 78 55.1
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 4.7e-14 81.3 47 74.5
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 4.7e-14 81.3 59 59.3
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 4.7e-14 81.3 47 74.5
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 4.7e-14 81.3 61 60.7
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 6.1e-14 80.9 87 47.1
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 8.0e-14 80.5 48 72.9
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 1.0e-13 80.1 62 56.5
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 1.0e-13 80.1 47 78.7
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 1.4e-13 79.7 46 76.1
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 1.4e-13 79.7 48 68.8
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 3.0e-13 78.6 47 70.2
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 3.0e-13 78.6 47 70.2
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 4.0e-13 78.2 64 59.4
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 4.0e-13 78.2 64 59.4
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 8.8e-13 77.0 72 56.9
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 2.0e-12 75.9 47 76.6
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 2.6e-12 75.5 48 70.8
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 1.3e-11 73.2 48 68.8
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.1e-10 70.1 55 65.5
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 1.1e-10 70.1 70 51.4
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 1.8e-10 69.3 63 50.8
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 4.1e-10 68.2 57 57.9
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 1.2e-09 66.6 56 60.7
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 1.2e-09 66.6 73 49.3
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 1.2e-09 66.6 73 49.3
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 2.7e-09 65.5 40 72.5
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 1.3e-08 63.2 47 63.8
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 1.3e-08 63.2 47 63.8
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 8.5e-08 60.5 51 54.9
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 1.9e-07 59.3 47 61.7
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 3.2e-07 58.5 75 45.3
SMO367G0828 Selaginella moellendorffii HOM05D006906 ORTHO05D008578 9.4e-07 57.0 47 55.3
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 2.1e-06 55.8 59 45.8
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 2.1e-06 55.8 57 54.4
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 6.1e-06 54.3 37 67.6


User provided reference genes

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