Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0767G216 Amborella trichopoda HOM05D017516 ORTHO05D019582 9.4e-162 573.5 306 100.0
MBI16_g27899_MAGBIO Magnolia biondii HOM05D017516 ORTHO05D019582 2.7e-92 342.8 310 66.1
TAR256G0009 Trochodendron aralioides HOM05D017516 ORTHO05D019582 3.1e-88 329.3 306 62.4
Dinv42595 Davidia involucrata HOM05D017516 ORTHO05D019582 2.1e-81 306.6 305 59.7
GSVIVG01009204001 Vitis vinifera HOM05D017516 ORTHO05D019582 5.3e-80 302.0 309 57.3
Nn5g29826 Nelumbo nucifera HOM05D017516 ORTHO05D019582 3.7e-57 226.1 145 76.6
CSS0031923 Camellia sinensis var. sinensis HOM05D017516 ORTHO05D019582 4.5e-47 192.6 207 51.2
SEGI_19284 Sequoiadendron giganteum HOM05D003598 ORTHO05D004198 2.6e-26 123.6 214 36.4
SEGI_23700 Sequoiadendron giganteum HOM05D003598 ORTHO05D004198 4.5e-23 112.8 213 38.0
Mapoly0032s0120 Marchantia polymorpha HOM05D003598 ORTHO05D004198 8.5e-22 108.6 246 31.7
AagrBONN_evm.TU.Sc2ySwM_368.147 Anthoceros agrestis HOM05D003598 ORTHO05D004198 5.7e-18 95.9 247 31.6
MBI06_g36503_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 6.3e-17 92.4 209 32.1
ATR0618G278 Amborella trichopoda HOM05D003598 ORTHO05D004198 8.3e-17 92.0 207 33.3
Pp3c13_7070 Physcomitrium patens HOM05D003598 ORTHO05D004198 2.4e-16 90.5 241 28.6
Migut.E01352 Erythranthe guttata HOM05D003598 ORTHO05D004198 1.2e-15 88.2 213 34.3
MBI06_g34034_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 7.7e-15 85.5 209 30.6
TWI77G0411 Tripterygium wilfordii HOM05D003598 ORTHO05D004198 1.3e-14 84.7 208 36.1
CDE05G0161 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 2.3e-14 84.0 210 34.3
MBI03_g24013_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 2.3e-14 84.0 209 33.0
GSVIVG01010181001 Vitis vinifera HOM05D003598 ORTHO05D004198 2.3e-14 84.0 210 35.2
QL02p009504 Quercus lobata HOM05D003598 ORTHO05D004198 2.9e-14 83.6 213 33.8
Manes.01G073300 Manihot esculenta HOM05D003598 ORTHO05D004198 6.6e-14 82.4 211 34.6
CANSAT64G1690 Cannabis sativa HOM05D003598 ORTHO05D004198 8.6e-14 82.0 213 32.9
PGR042G0762 Punica granatum HOM05D003598 ORTHO05D004198 1.1e-13 81.6 211 31.3
TAR371G1198 Trochodendron aralioides HOM05D003598 ORTHO05D004198 1.1e-13 81.6 220 35.5
PSO063G0008 Papaver somniferum HOM05D003598 ORTHO05D004198 3.3e-13 80.1 212 30.7
CDE04G2679 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 4.2e-13 79.7 208 32.7
Dinv32105 Davidia involucrata HOM05D003598 ORTHO05D004198 7.2e-13 79.0 213 33.3
PSO782G0946 Papaver somniferum HOM05D003598 ORTHO05D004198 7.2e-13 79.0 212 29.7
Hma1.2p1_0218F.1_g092550 Hydrangea macrophylla HOM05D003598 ORTHO05D004198 9.5e-13 78.6 211 34.1
Actinidia11173 Actinidia chinensis HOM05D003598 ORTHO05D004198 2.1e-12 77.4 212 32.5
Cc08_g05000 Coffea canephora HOM05D003598 ORTHO05D004198 2.1e-12 77.4 216 32.4
DCAR_002566 Daucus carota HOM05D003598 ORTHO05D004198 2.1e-12 77.4 209 30.6
Potri.002G062200 Populus trichocarpa HOM05D003598 ORTHO05D004198 2.8e-12 77.0 211 32.2
Lsat_1_v5_gn_3_7261 Lactuca sativa HOM05D003598 ORTHO05D004198 3.6e-12 76.6 208 33.7
SGA_v2.0_scaffold144G35883 Striga asiatica HOM05D003598 ORTHO05D004198 4.7e-12 76.3 208 31.2
COL.COLO4_11873 Corchorus olitorius HOM05D003598 ORTHO05D004198 8.0e-12 75.5 205 32.7
Atru.chr9.2066 Acer truncatum HOM05D003598 ORTHO05D004198 1.0e-11 75.1 208 34.1
CiPaw.08G060100 Carya illinoinensis HOM05D003598 ORTHO05D004198 1.0e-11 75.1 212 30.7
MSTRG.1768 Avicennia marina HOM05D003598 ORTHO05D004198 1.4e-11 74.7 211 30.8
BcaC04g18694 Brassica carinata HOM05D003598 ORTHO05D004198 1.4e-11 74.7 209 33.0
Dinv05241 Davidia involucrata HOM05D003598 ORTHO05D004198 1.4e-11 74.7 210 32.9
CDE02G3181 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 1.8e-11 74.3 211 30.8
Potri.005G198900 Populus trichocarpa HOM05D003598 ORTHO05D004198 3.0e-11 73.6 212 31.6
Carub.0008s0217 Capsella rubella HOM05D003598 ORTHO05D004198 4.0e-11 73.2 209 30.1
Zm00001eb066420 Zea mays HOM05D003598 ORTHO05D004198 4.0e-11 73.2 203 29.6
Zm00001eb066470 Zea mays HOM05D003598 ORTHO05D004198 4.0e-11 73.2 203 29.6
Haze_22545 Corylus avellana HOM05D003598 ORTHO05D004198 5.2e-11 72.8 212 31.1
CiPaw.07G157700 Carya illinoinensis HOM05D003598 ORTHO05D004198 8.9e-11 72.0 209 33.5
Ca_03027_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 1.2e-10 71.6 211 31.3
MELO3C024034.2 Cucumis melo HOM05D003598 ORTHO05D004198 1.2e-10 71.6 210 32.4
BraA10t44179Z Brassica rapa HOM05D001989 ORTHO05D004198 1.5e-10 71.2 210 31.9
Lj6A721G58 Lonicera japonica HOM05D003598 ORTHO05D004198 1.5e-10 71.2 162 34.6
Nn4g24926 Nelumbo nucifera HOM05D003598 ORTHO05D004198 1.5e-10 71.2 208 32.2
TWI53G1744 Tripterygium wilfordii HOM05D003598 ORTHO05D004198 1.5e-10 71.2 208 31.2
Pp3c8_19850 Physcomitrium patens HOM05D003598 ORTHO05D004198 2.0e-10 70.9 170 31.8
AL6G29630 Arabidopsis lyrata HOM05D003598 ORTHO05D004198 2.6e-10 70.5 210 30.0
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 2.6e-10 70.5 209 33.0
BolC3t13511H Brassica oleracea HOM05D003598 ORTHO05D004198 2.6e-10 70.5 209 33.0
BraA03t10207Z Brassica rapa HOM05D003598 ORTHO05D004198 2.6e-10 70.5 209 33.0
Cfa013868 Carpinus fangiana HOM05D003598 ORTHO05D004198 2.6e-10 70.5 215 32.1
Gohir.D08G204800 Gossypium hirsutum HOM05D003598 ORTHO05D004198 2.6e-10 70.5 204 32.4
Gorai.004G216900 Gossypium raimondii HOM05D003598 ORTHO05D004198 3.4e-10 70.1 207 31.9
Rhsim06G0126100 Rhododendron simsii HOM05D003598 ORTHO05D004198 3.4e-10 70.1 215 30.7
Sp6g25920 Schrenkiella parvula HOM05D003598 ORTHO05D004198 3.4e-10 70.1 210 31.9
Aqoxy3G01046 Aquilegia oxysepala HOM05D003598 ORTHO05D004198 4.4e-10 69.7 211 33.6
CSS0049191 Camellia sinensis var. sinensis HOM05D003598 ORTHO05D004198 5.7e-10 69.3 210 33.3
SalBow8G4212 Salvia bowleyana HOM05D003598 ORTHO05D004198 5.7e-10 69.3 211 31.3
Cpa.g.sc51.45 Carica papaya HOM05D003598 ORTHO05D004198 7.5e-10 68.9 205 29.3
Os04g0674400 Oryza sativa ssp. japonica HOM05D003598 ORTHO05D004198 7.5e-10 68.9 204 29.4
CsaV3_3G031510 Cucumis sativus L. HOM05D003598 ORTHO05D004198 9.8e-10 68.6 213 32.4
Lalb_Chr03g0024851 Lupinus albus HOM05D003598 ORTHO05D004198 9.8e-10 68.6 211 30.3
C03p10310 Brassica napus HOM05D003598 ORTHO05D004198 1.3e-09 68.2 213 31.9
Duzib133G1064 Durio zibethinus HOM05D003598 ORTHO05D004198 1.3e-09 68.2 206 34.0
unitig_899.g14735 Utricularia gibba HOM05D003598 ORTHO05D004198 1.3e-09 68.2 218 30.3
AT5G18400 Arabidopsis thaliana HOM05D003598 ORTHO05D004198 1.7e-09 67.8 210 30.5
Gohir.D11G129900 Gossypium hirsutum HOM05D003598 ORTHO05D004198 1.7e-09 67.8 207 30.0
Gohir.A11G124700 Gossypium hirsutum HOM05D003598 ORTHO05D004198 2.2e-09 67.4 203 30.5
Gorai.007G139000 Gossypium raimondii HOM05D003598 ORTHO05D004198 2.2e-09 67.4 203 30.5
Solyc08g075730.3 Solanum lycopersicum HOM05D003598 ORTHO05D004198 2.9e-09 67.0 214 29.9
Nitab4.5_0002941g0020 Nicotiana tabacum HOM05D003598 ORTHO05D004198 3.7e-09 66.6 207 30.0
Os04g0682050 Oryza sativa ssp. japonica HOM05D003598 ORTHO05D004198 3.7e-09 66.6 204 28.9
Sopen08g024380 Solanum pennellii HOM05D003598 ORTHO05D004198 3.7e-09 66.6 214 29.9
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 6.3e-09 65.9 211 30.8
Sabra05G0151500 Salix brachista HOM05D003598 ORTHO05D004198 6.3e-09 65.9 212 28.3
CAN.G1425.3 Capsicum annuum HOM05D003598 ORTHO05D004198 1.4e-08 64.7 207 31.4
BolC9t58693H Brassica oleracea HOM05D003598 ORTHO05D004198 1.8e-08 64.3 214 31.8
MD13G1007600 Malus domestica HOM05D003598 ORTHO05D004198 1.8e-08 64.3 207 30.4
Nitab4.5_0001659g0130 Nicotiana tabacum HOM05D003598 ORTHO05D004198 2.4e-08 63.9 207 30.0
Ciclev10032368m.g Citrus clementina HOM05D003598 ORTHO05D004198 4.1e-08 63.2 209 29.2
Prupe.1G345400 Prunus persica HOM05D003598 ORTHO05D004198 5.4e-08 62.8 203 28.1
MD16G1000500 Malus domestica HOM05D003598 ORTHO05D004198 7.0e-08 62.4 207 30.0
AUR62017668 Chenopodium quinoa HOM05D003598 ORTHO05D004198 1.2e-07 61.6 172 32.0
Eucgr.J00852 Eucalyptus grandis HOM05D003598 ORTHO05D004198 1.2e-07 61.6 213 29.6
Psat7g173800 Pisum sativum HOM05D003598 ORTHO05D004198 1.2e-07 61.6 209 30.6
Sabra02G0050100 Salix brachista HOM05D003598 ORTHO05D004198 1.2e-07 61.6 210 31.0
AUR62015205 Chenopodium quinoa HOM05D003598 ORTHO05D004198 2.0e-07 60.8 172 32.6
CSS0011637 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D000909 7.8e-07 58.9 208 32.2
Glyma.12G141400 Glycine max HOM05D003598 ORTHO05D004198 1.3e-06 58.2 211 29.4
TAR629G0796 Trochodendron aralioides HOM05D003598 ORTHO05D004198 1.3e-06 58.2 155 32.9
Cc00_g26130 Coffea canephora HOM05D003598 ORTHO05D004198 5.0e-06 56.2 197 31.0
Cc08_g04800 Coffea canephora HOM05D003598 ORTHO05D004198 5.0e-06 56.2 212 28.3


User provided reference genes

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