Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0767G189 Amborella trichopoda HOM05D008539 ORTHO05D010637 2.2e-310 1068.1 558 100.0
MBI16_g05035_MAGBIO Magnolia biondii HOM05D008539 ORTHO05D010637 2.1e-79 300.8 563 40.0
SEGI_19235 Sequoiadendron giganteum HOM05D008539 ORTHO05D010637 5.5e-75 286.2 639 36.0
Nn5g30717 Nelumbo nucifera HOM05D008539 ORTHO05D010637 8.1e-71 272.3 611 35.0
Cfa006803 Carpinus fangiana HOM05D000349 ORTHO05D000620 1.1e-70 271.9 606 36.1
Haze_03958 Corylus avellana HOM05D008539 ORTHO05D010637 7.6e-69 265.8 610 35.7
Manes.13G106500 Manihot esculenta HOM05D008539 ORTHO05D010637 1.7e-60 238.0 549 35.5
Prupe.6G212800 Prunus persica HOM05D008539 ORTHO05D010637 1.9e-59 234.6 550 34.0
Dinv26981 Davidia involucrata HOM05D000349 ORTHO05D010637 5.9e-53 213.0 484 36.8
Atru.chr3.1092 Acer truncatum HOM05D008539 ORTHO05D010637 5.1e-49 199.9 546 34.2
CiPaw.08G148100 Carya illinoinensis HOM05D008539 ORTHO05D010637 1.3e-47 195.3 533 32.8
Ciclev10025260m.g Citrus clementina HOM05D008539 ORTHO05D010637 9.1e-46 189.1 512 33.0
CANSAT01G2572 Cannabis sativa HOM05D008539 ORTHO05D010637 5.5e-43 179.9 587 32.0
PSO675G5298 Papaver somniferum HOM05D008539 ORTHO05D010637 1.6e-42 178.3 530 32.6
PSO541G5024 Papaver somniferum HOM05D008539 ORTHO05D010637 7.9e-42 176.0 533 31.5
Thecc.01G080200 Theobroma cacao HOM05D008539 ORTHO05D010637 1.0e-41 175.6 419 35.8
FAN26G2853 Fragaria x ananassa HOM05D008539 ORTHO05D010637 2.6e-40 171.0 546 31.1
Hma1.2p1_1147F.1_g261540 Hydrangea macrophylla HOM05D008539 ORTHO05D010637 2.6e-40 171.0 501 32.1
FvH4_1g18650 Fragaria vesca HOM05D008539 ORTHO05D010637 3.3e-40 170.6 544 31.1
TAR628G1178 Trochodendron aralioides HOM05D008539 ORTHO05D010637 1.7e-39 168.3 344 39.0
FAN23G1883 Fragaria x ananassa HOM05D008539 ORTHO05D010637 3.1e-38 164.1 535 31.0
RcHm_v2.0_Chr2g0109471 Rosa chinensis HOM05D008539 ORTHO05D010637 5.3e-38 163.3 597 29.5
QL06p038103 Quercus lobata HOM05D008539 ORTHO05D010637 2.0e-37 161.4 525 30.7
COL.COLO4_11651 Corchorus olitorius HOM05D008539 ORTHO05D010637 2.6e-37 161.0 556 30.6
FAN28G0277 Fragaria x ananassa HOM05D008539 ORTHO05D010637 8.5e-36 156.0 543 30.8
Gorai.007G228600 Gossypium raimondii HOM05D008539 ORTHO05D010637 1.2e-34 152.1 522 30.3
Gohir.D11G212700 Gossypium hirsutum HOM05D008539 ORTHO05D010637 8.0e-34 149.4 517 30.2
Gohir.A11G210466 Gossypium hirsutum HOM05D008539 ORTHO05D010637 3.0e-33 147.5 607 28.5
TAR628G0786 Trochodendron aralioides HOM05D008539 ORTHO05D010637 4.4e-32 143.7 282 39.0
Glyma.01G197400 Glycine max HOM05D008539 ORTHO05D010637 1.3e-31 142.1 488 28.9
ClCG01G017970 Citrullus lanatus HOM05D008539 ORTHO05D010637 4.7e-26 123.6 436 33.3
Sed0007885 Sechium edule HOM05D008539 ORTHO05D010637 4.7e-26 123.6 291 35.1
Ciclev10007100m.g Citrus clementina HOM05D008539 ORTHO05D010637 1.4e-25 122.1 312 30.1
Sc07g0000280 Simmondsia chinensis HOM05D008539 ORTHO05D010637 1.8e-25 121.7 390 34.1
CsaV3_6G044500 Cucumis sativus L. HOM05D008539 ORTHO05D010637 1.4e-22 112.1 421 31.1
MELO3C007672.2 Cucumis melo HOM05D008539 ORTHO05D010637 2.0e-21 108.2 443 29.1
Mapoly0011s0007 Marchantia polymorpha HOM05D008539 ORTHO05D010637 2.9e-20 104.4 276 37.0
Lalb_Chr09g0323801 Lupinus albus HOM05D008539 ORTHO05D010637 1.5e-19 102.1 512 26.2
Phvul.002G008000 Phaseolus vulgaris HOM05D008539 ORTHO05D010637 4.7e-18 97.1 532 26.3
arahy.Tifrunner.gnm1.ann1.W1L6ST Arachis hypogaea HOM05D008539 ORTHO05D010637 8.0e-18 96.3 547 29.6
arahy.Tifrunner.gnm1.ann1.P8GH0J Arachis hypogaea HOM05D008539 ORTHO05D010637 1.0e-17 95.9 552 29.3
FAN19G1588 Fragaria x ananassa HOM05D008539 ORTHO05D010637 5.2e-17 93.6 559 25.8
Cpa.g.sc129.44 Carica papaya HOM05D008539 ORTHO05D010637 2.6e-16 91.3 345 28.1
Glyma.11G044300 Glycine max HOM05D008539 ORTHO05D010637 1.8e-14 85.1 312 29.8
Cc07_g07630 Coffea canephora HOM05D008539 ORTHO05D010637 2.0e-13 81.6 401 25.9
Potri.007G009000 Populus trichocarpa HOM05D008539 ORTHO05D010637 1.3e-12 79.0 485 22.5
VMungo1215G1773 Vigna mungo HOM05D008539 ORTHO05D010637 8.6e-12 76.3 480 25.0
Medtr5g014750 Medicago truncatula HOM05D008539 ORTHO05D010637 8.3e-07 59.7 307 27.0
Sabra07G0006900 Salix brachista HOM05D002093 ORTHO05D008902 1.8e-06 58.5 287 23.0


User provided reference genes

Program Settings