Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 1.4e-136 489.6 241 100.0
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 2.5e-61 239.6 236 50.8
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 5.6e-61 238.4 190 55.8
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 4.8e-60 235.3 226 50.4
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 8.1e-60 234.6 244 48.4
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 4.0e-59 232.3 185 56.2
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 2.0e-58 229.9 184 54.3
TAR381G0282 Trochodendron aralioides HOM05D007054 ORTHO05D008888 3.4e-58 229.2 244 50.8
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 4.5e-58 228.8 228 49.6
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 5.8e-58 228.4 165 61.8
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 7.6e-58 228.0 174 59.2
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 1.7e-57 226.9 180 56.7
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 1.7e-57 226.9 230 50.9
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 3.8e-57 225.7 242 50.0
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 3.2e-56 222.6 232 48.7
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 4.2e-56 222.2 168 60.1
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 1.2e-55 220.7 185 54.1
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 2.1e-55 219.9 189 52.4
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 2.1e-55 219.9 218 48.6
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 3.5e-55 219.2 221 49.8
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 3.5e-55 219.2 175 57.1
CDE02G0602 Ceratophyllum demersum HOM05D007054 ORTHO05D008888 6.0e-55 218.4 159 62.9
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 7.9e-55 218.0 174 56.3
THA.LOC104798802 Tarenaya hassleriana HOM05D007054 ORTHO05D008888 7.9e-55 218.0 165 53.9
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 1.8e-54 216.9 179 53.6
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 2.3e-54 216.5 226 48.7
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 3.0e-54 216.1 169 56.2
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 3.0e-54 216.1 169 58.0
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 3.9e-54 215.7 181 55.8
Lalb_Chr01g0013331 Lupinus albus HOM05D007054 ORTHO05D008888 5.1e-54 215.3 180 53.3
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 6.7e-54 214.9 169 55.6
Peaxi162Scf00016g01532 Petunia axillaris HOM05D007054 ORTHO05D008888 6.7e-54 214.9 227 47.1
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 6.7e-54 214.9 170 56.5
TWI79G0983 Tripterygium wilfordii HOM05D007054 ORTHO05D008888 6.7e-54 214.9 193 50.8
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 8.7e-54 214.5 216 49.5
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 1.5e-53 213.8 197 48.2
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 1.9e-53 213.4 170 56.5
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 2.5e-53 213.0 168 53.6
PSO541G2621 Papaver somniferum HOM05D007054 ORTHO05D008888 3.3e-53 212.6 174 56.9
PSO675G3773 Papaver somniferum HOM05D007054 ORTHO05D008888 4.3e-53 212.2 174 56.9
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 5.6e-53 211.8 169 55.0
Glyma.20G009500 Glycine max HOM05D007054 ORTHO05D008888 7.4e-53 211.5 200 53.0
MSTRG.5374 Avicennia marina HOM05D007054 ORTHO05D008888 2.1e-52 209.9 172 51.2
arahy.Tifrunner.gnm1.ann1.M7JB84 Arachis hypogaea HOM05D007054 ORTHO05D008888 8.1e-52 208.0 224 46.9
Psat6g096080 Pisum sativum HOM05D007054 ORTHO05D008888 1.1e-51 207.6 171 53.2
Nitab4.5_0001401g0040 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.4e-51 207.2 171 54.4
arahy.Tifrunner.gnm1.ann1.LAP5IF Arachis hypogaea HOM05D007054 ORTHO05D008888 1.8e-51 206.8 227 44.9
Solyc01g108650.3 Solanum lycopersicum HOM05D007054 ORTHO05D008888 1.8e-51 206.8 181 51.9
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 2.4e-51 206.5 175 50.3
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 3.1e-51 206.1 175 53.1
A05p20580 Brassica napus HOM05D007054 ORTHO05D008888 4.0e-51 205.7 174 50.6
BraA05t20968Z Brassica rapa HOM05D007054 ORTHO05D008888 4.0e-51 205.7 174 50.6
Glyma.07G179400 Glycine max HOM05D007054 ORTHO05D008888 4.0e-51 205.7 165 57.0
HanXRQChr12g0374541 Helianthus annuus HOM05D007054 ORTHO05D008888 4.0e-51 205.7 226 47.3
Sopen01g050870 Solanum pennellii HOM05D007054 ORTHO05D008888 5.3e-51 205.3 181 51.4
PGSC0003DMG400025902 Solanum tuberosum HOM05D007054 ORTHO05D008888 6.9e-51 204.9 181 51.4
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 9.0e-51 204.5 165 55.2
Migut.N01207 Erythranthe guttata HOM05D007054 ORTHO05D008888 9.0e-51 204.5 177 53.1
SalBow3G3466 Salvia bowleyana HOM05D007054 ORTHO05D008888 9.0e-51 204.5 182 51.1
Nitab4.5_0003726g0060 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.2e-50 204.1 219 47.0
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 2.0e-50 203.4 171 53.8
AL1G56860 Arabidopsis lyrata HOM05D007054 ORTHO05D008888 2.6e-50 203.0 176 48.9
AT1G49510 Arabidopsis thaliana HOM05D007054 ORTHO05D008888 4.5e-50 202.2 183 49.7
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 4.5e-50 202.2 163 58.9
Sp1g36370 Schrenkiella parvula HOM05D007054 ORTHO05D008888 5.8e-50 201.8 176 50.6
Aa31LG8G5880 Aethionema arabicum HOM05D007054 ORTHO05D008888 7.6e-50 201.4 169 47.9
TPR.G11147 Trifolium pratense HOM05D007054 ORTHO05D008888 1.3e-49 200.7 168 52.4
Medtr1g034050 Medicago truncatula HOM05D007054 ORTHO05D008888 2.2e-49 199.9 167 52.1
BcaC05g27487 Brassica carinata HOM05D007054 ORTHO05D008888 2.9e-49 199.5 174 49.4
C05p34530 Brassica napus HOM05D007054 ORTHO05D008888 2.9e-49 199.5 174 49.4
BcaB02g11085 Brassica carinata HOM05D007054 ORTHO05D008888 8.4e-49 198.0 176 50.6
BolC5t32180H Brassica oleracea HOM05D007054 ORTHO05D008888 1.1e-48 197.6 174 49.4
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 1.4e-48 197.2 175 48.6
FAN27G0716 Fragaria x ananassa HOM05D007054 ORTHO05D008888 1.4e-48 197.2 161 55.3
EL10Ac6g14668 Beta vulgaris HOM05D007054 ORTHO05D008888 2.5e-48 196.4 176 49.4
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 2.5e-48 196.4 180 46.1
Thhalv10011746m.g Eutrema salsugineum HOM05D007054 ORTHO05D008888 2.5e-48 196.4 172 48.8
Lsat_1_v5_gn_5_117740 Lactuca sativa HOM05D007054 ORTHO05D008888 2.5e-48 196.4 178 51.7
Aa31LG10G4480 Aethionema arabicum HOM05D007054 ORTHO05D008888 3.2e-48 196.1 186 45.7
CAN.G322.40 Capsicum annuum HOM05D007054 ORTHO05D008888 4.2e-48 195.7 175 50.3
SGA_v2.0_scaffold9G04688 Striga asiatica HOM05D007054 ORTHO05D008888 4.2e-48 195.7 166 51.8
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 1.2e-47 194.1 179 46.9
ECA234G0688 Erigeron canadensis HOM05D007054 ORTHO05D008888 4.6e-47 192.2 165 52.1
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 1.0e-46 191.0 250 42.0
Cc02_g18390 Coffea canephora HOM05D007054 ORTHO05D008888 2.5e-45 186.4 160 51.2
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 4.3e-45 185.7 165 48.5
AUR62007867 Chenopodium quinoa HOM05D007054 ORTHO05D008888 4.3e-45 185.7 178 47.8
AUR62003054 Chenopodium quinoa HOM05D007054 ORTHO05D008888 5.7e-45 185.3 178 47.8
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 5.7e-45 185.3 175 46.9
HPP92_001831 Vanilla planifolia HOM05D007054 ORTHO05D008888 8.5e-41 171.4 153 49.7
FAN24G1908 Fragaria x ananassa HOM05D007054 ORTHO05D008888 4.6e-39 165.6 190 44.7
Nitab4.5_0000604g0160 Nicotiana tabacum HOM05D007054 ORTHO05D008888 4.8e-36 155.6 172 46.5
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 1.8e-35 153.7 190 39.5
Eucgr.I01181 Eucalyptus grandis HOM05D007054 ORTHO05D008888 8.8e-30 134.8 148 43.2
VMungo1215G1743 Vigna mungo HOM05D007054 ORTHO05D008888 1.5e-29 134.0 116 53.4
Cpa.g.sc62.54 Carica papaya HOM05D007054 ORTHO05D008888 2.0e-29 133.7 140 46.4
AagrBONN_evm.TU.Sc2ySwM_344.1640 Anthoceros agrestis HOM05D007054 ORTHO05D008888 1.7e-28 130.6 148 39.2
DCAR_022067 Daucus carota HOM05D007054 ORTHO05D008888 1.7e-28 130.6 155 41.9
Sed0021769 Sechium edule HOM05D007054 ORTHO05D008888 1.2e-26 124.4 123 43.9
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 3.0e-22 109.8 182 31.9
unitig_8.g3574 Utricularia gibba HOM05D007054 ORTHO05D008888 6.7e-22 108.6 121 44.6
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 6.3e-20 102.1 176 31.8
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 6.3e-20 102.1 171 35.7
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 5.3e-19 99.0 168 34.5
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 9.1e-19 98.2 169 33.1
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 4.5e-18 95.9 169 32.5
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 4.5e-18 95.9 165 36.4
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 4.5e-18 95.9 177 31.1
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 7.7e-18 95.1 182 30.2
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 7.7e-18 95.1 187 27.8
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 7.7e-18 95.1 157 33.8
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 1.0e-17 94.7 154 34.4
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 1.3e-17 94.4 181 32.0
Aa31sc103G20 Aethionema arabicum HOM05D007054 ORTHO05D008888 2.9e-17 93.2 78 48.7
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 3.8e-17 92.8 182 30.8
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 6.5e-17 92.0 193 29.5
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 1.1e-16 91.3 150 36.0
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 1.9e-16 90.5 193 28.5
Aa31LG1G22300 Aethionema arabicum HOM05D007054 ORTHO05D008888 3.2e-16 89.7 78 48.7
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 2.7e-15 86.7 183 29.5
arahy.Tifrunner.gnm1.ann1.2HX679 Arachis hypogaea HOM05D007054 ORTHO05D008888 3.6e-15 86.3 84 45.2
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 8.0e-15 85.1 190 29.5
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 1.4e-14 84.3 155 31.6
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 1.4e-14 84.3 193 26.9
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 1.8e-14 84.0 169 30.8
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 1.8e-14 84.0 162 32.1
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 2.3e-14 83.6 150 34.7
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 3.0e-14 83.2 184 30.4
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 5.2e-14 82.4 217 26.7
Nitab4.5_0002263g0050 Nicotiana tabacum HOM05D007054 ORTHO05D008888 6.7e-14 82.0 61 62.3
arahy.Tifrunner.gnm1.ann1.I8PDZB Arachis hypogaea HOM05D007054 ORTHO05D008888 1.5e-13 80.9 91 40.7
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 1.5e-13 80.9 166 27.7
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 2.0e-13 80.5 152 28.3
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 7.5e-13 78.6 142 29.6
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 9.7e-13 78.2 152 27.6
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 1.7e-12 77.4 137 33.6
FvH4_2g06990 Fragaria vesca HOM05D007054 ORTHO05D008888 1.7e-12 77.4 63 55.6
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 1.7e-12 77.4 179 28.5
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 2.8e-12 76.6 182 29.1
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 3.7e-12 76.3 172 26.2
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 3.7e-12 76.3 187 28.9
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 4.8e-12 75.9 172 26.2
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 1.6e-10 70.9 125 34.4
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 1.6e-10 70.9 183 27.9
arahy.Tifrunner.gnm1.ann1.RU27EM Arachis hypogaea HOM05D007054 ORTHO05D008888 2.0e-10 70.5 61 47.5
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 3.5e-10 69.7 228 23.2
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 7.7e-10 68.6 226 24.8
CANSAT25G1642 Cannabis sativa HOM05D007054 ORTHO05D008888 1.0e-09 68.2 111 36.0
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.0e-09 68.2 147 26.5
Pp3c24_11510 Physcomitrium patens HOM05D007054 ORTHO05D008888 3.8e-09 66.2 104 32.7
Nn5g29374 Nelumbo nucifera HOM05D007054 ORTHO05D008888 5.0e-09 65.9 119 32.8
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.1e-08 64.7 168 27.4
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 5.5e-08 62.4 194 25.3
FAN24G0450 Fragaria x ananassa HOM05D007054 ORTHO05D008888 2.1e-07 60.5 98 34.7
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 4.7e-07 59.3 139 26.6
CARHR039540 Cardamine hirsuta HOM05D007054 ORTHO05D008888 5.2e-06 55.8 35 60.0


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