Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0767G159 Amborella trichopoda HOM05D006524 ORTHO05D010188 5.2e-46 187.2 85 100.0
ATR0684G108 Amborella trichopoda HOM05D006524 ORTHO05D010188 1.9e-27 125.6 85 71.8
ATR0624G115 Amborella trichopoda HOM05D038510 ORTHO05D010188 2.6e-21 105.1 78 67.9
ATR1091G048 Amborella trichopoda HOM05D006524 ORTHO05D010188 1.4e-14 82.8 66 57.6
ATR0598G086 Amborella trichopoda HOM05D006524 ORTHO05D010188 9.0e-14 80.1 72 52.8
ATR0680G432 Amborella trichopoda HOM05D062661 ORTHO05D065772 8.5e-12 73.6 54 66.7
ATR0684G192 Amborella trichopoda HOM05D006524 ORTHO05D010188 5.5e-11 70.9 64 54.7
ATR0629G071 Amborella trichopoda HOM05D006524 ORTHO05D010188 3.6e-10 68.2 78 46.2
ATR0724G006 Amborella trichopoda HOM05D006524 ORTHO05D010188 1.8e-09 65.9 63 54.0
ATR0097G040 Amborella trichopoda HOM05D006524 ORTHO05D010188 5.1e-09 64.3 65 49.2
ATR0498G006 Amborella trichopoda HOM05D006524 ORTHO05D010188 1.5e-08 62.8 58 53.4
ATR0104G027 Amborella trichopoda HOM05D006524 ORTHO05D010188 1.9e-08 62.4 64 50.0
ATR1155G025 Amborella trichopoda HOM05D006524 ORTHO05D010188 1.9e-08 62.4 65 50.8
ATR0629G108 Amborella trichopoda HOM05D006524 ORTHO05D010188 2.5e-08 62.0 64 50.0
THA.LOC104799018 Tarenaya hassleriana HOM05D000176 ORTHO05D000106 3.3e-08 61.6 53 58.5
Aa31LG10G5620 Aethionema arabicum HOM05D000176 ORTHO05D003511 4.3e-08 61.2 62 48.4
Rhsim03G0028500 Rhododendron simsii HOM05D000176 ORTHO05D000106 5.7e-08 60.8 83 43.4
AL1G30280 Arabidopsis lyrata HOM05D000176 ORTHO05D000106 1.7e-07 59.3 53 56.6
BcaB07g34015 Brassica carinata HOM05D000176 ORTHO05D000106 1.7e-07 59.3 53 56.6
C05p16290 Brassica napus HOM05D000176 ORTHO05D000106 1.7e-07 59.3 53 56.6
BolC5t30331H Brassica oleracea HOM05D000176 ORTHO05D000106 1.7e-07 59.3 53 56.6
CANSAT56G1843 Cannabis sativa HOM05D000176 ORTHO05D000106 1.7e-07 59.3 53 56.6
CARHR018550 Cardamine hirsuta HOM05D000176 ORTHO05D000106 1.7e-07 59.3 53 56.6
Thhalv10007522m.g Eutrema salsugineum HOM05D000176 ORTHO05D000106 1.7e-07 59.3 53 56.6
Sp1g16000 Schrenkiella parvula HOM05D000176 ORTHO05D000106 1.7e-07 59.3 53 56.6
AT1G17930 Arabidopsis thaliana HOM05D000176 ORTHO05D000106 2.2e-07 58.9 53 54.7
A06p13970 Brassica napus HOM05D000176 ORTHO05D000106 2.8e-07 58.5 53 54.7
BraA06t24537Z Brassica rapa HOM05D000176 ORTHO05D000106 2.8e-07 58.5 53 54.7
MELO3C028357.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.8e-07 58.5 59 52.5
MELO3C033541.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.8e-07 58.5 60 51.7
CsaV3_5G039840 Cucumis sativus L. HOM05D000176 ORTHO05D000106 2.8e-07 58.5 60 51.7
arahy.Tifrunner.gnm1.ann1.WF6CYV Arachis hypogaea HOM05D000176 ORTHO05D000106 3.7e-07 58.2 59 45.8
MELO3C027326.2 Cucumis melo HOM05D000176 ORTHO05D000106 3.7e-07 58.2 59 52.5
Sabra01G0157300 Salix brachista HOM05D000176 ORTHO05D000106 3.7e-07 58.2 64 48.4
Solyc12g056672.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.7e-07 58.2 68 44.1
Cc03_g15950 Coffea canephora HOM05D000176 ORTHO05D003511 4.8e-07 57.8 59 49.2
Aa31LG11G4340 Aethionema arabicum HOM05D000176 ORTHO05D000106 6.3e-07 57.4 53 54.7
MSTRG.13026 Avicennia marina HOM05D000176 ORTHO05D000106 6.3e-07 57.4 59 47.5
A04p19430 Brassica napus HOM05D000176 ORTHO05D000106 8.2e-07 57.0 64 45.3
BolC6t35381H Brassica oleracea HOM05D000176 ORTHO05D003511 8.2e-07 57.0 59 47.5
BraA04t17538Z Brassica rapa HOM05D000176 ORTHO05D000106 8.2e-07 57.0 64 45.3
QL05p044352 Quercus lobata HOM05D000176 ORTHO05D000106 8.2e-07 57.0 59 49.2
Lalb_Chr01g0015401 Lupinus albus HOM05D000176 ORTHO05D000106 1.1e-06 56.6 59 52.5
Aa31sc575G20 Aethionema arabicum HOM05D000176 ORTHO05D000106 1.4e-06 56.2 60 46.7
AL1G54690 Arabidopsis lyrata HOM05D000176 ORTHO05D003511 1.4e-06 56.2 59 47.5
AT1G48120 Arabidopsis thaliana HOM05D000176 ORTHO05D003511 1.4e-06 56.2 59 47.5
arahy.Tifrunner.gnm1.ann1.K481AV Arachis hypogaea HOM05D003302 ORTHO05D003785 1.4e-06 56.2 60 48.3
A06p04680 Brassica napus HOM05D000176 ORTHO05D003511 1.4e-06 56.2 59 47.5
C06p02530 Brassica napus HOM05D000176 ORTHO05D003511 1.4e-06 56.2 59 47.5
BraA06t23671Z Brassica rapa HOM05D000176 ORTHO05D003511 1.4e-06 56.2 59 47.5
Carub.0001s3722 Capsella rubella HOM05D000176 ORTHO05D003511 1.4e-06 56.2 59 47.5
CARHR037760 Cardamine hirsuta HOM05D000176 ORTHO05D003511 1.4e-06 56.2 59 47.5
DCAR_030358 Daucus carota HOM05D000176 ORTHO05D000106 1.4e-06 56.2 59 47.5
Migut.M01636 Erythranthe guttata HOM05D000176 ORTHO05D000106 1.4e-06 56.2 59 45.8
Thhalv10011184m.g Eutrema salsugineum HOM05D000176 ORTHO05D003511 1.4e-06 56.2 59 47.5
Sp1g35090 Schrenkiella parvula HOM05D000176 ORTHO05D003511 1.4e-06 56.2 59 47.5
THA.LOC104802612 Tarenaya hassleriana HOM05D000176 ORTHO05D003511 1.4e-06 56.2 59 49.2
ATR0016G019 Amborella trichopoda HOM05D006524 ORTHO05D010188 1.8e-06 55.8 65 46.2
arahy.Tifrunner.gnm1.ann1.1F444R Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.2EXG5E Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.5C13H3 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.841NM0 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.918IDM Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.99XRU9 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 42.4
arahy.Tifrunner.gnm1.ann1.9C08J7 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 42.4
arahy.Tifrunner.gnm1.ann1.ADJX87 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 42.4
arahy.Tifrunner.gnm1.ann1.E098MH Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.F275S5 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.G5241E Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.KPN4HA Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.RHK7YZ Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.U08PDC Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.V9ZM2V Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 50.8
arahy.Tifrunner.gnm1.ann1.WM7F00 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 45.8
arahy.Tifrunner.gnm1.ann1.X2MRVD Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 50.8
arahy.Tifrunner.gnm1.ann1.XDKT5L Arachis hypogaea HOM05D000176 ORTHO05D001565 1.8e-06 55.8 59 50.8
arahy.Tifrunner.gnm1.ann1.XWFJ2F Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 44.1
arahy.Tifrunner.gnm1.ann1.Y6ZTW6 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 50.8
arahy.Tifrunner.gnm1.ann1.Z8VC5R Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 59 42.4
A03p44500 Brassica napus HOM05D000176 ORTHO05D000106 1.8e-06 55.8 60 46.7
C03p55310 Brassica napus HOM05D000176 ORTHO05D000106 1.8e-06 55.8 60 46.7
BolC3t17803H Brassica oleracea HOM05D000176 ORTHO05D000106 1.8e-06 55.8 60 46.7
BraA03t13583Z Brassica rapa HOM05D000176 ORTHO05D000106 1.8e-06 55.8 60 46.7
CARHR102890 Cardamine hirsuta HOM05D000176 ORTHO05D000106 1.8e-06 55.8 60 46.7
Thhalv10002429m.g Eutrema salsugineum HOM05D000176 ORTHO05D000106 1.8e-06 55.8 60 46.7
FvH4_3g28611 Fragaria vesca HOM05D000176 ORTHO05D000106 1.8e-06 55.8 53 54.7
RcHm_v2.0_Chr5g0052481 Rosa chinensis HOM05D000176 ORTHO05D000106 1.8e-06 55.8 63 50.8
Sp3g23470 Schrenkiella parvula HOM05D000176 ORTHO05D000106 1.8e-06 55.8 60 46.7
arahy.Tifrunner.gnm1.ann1.4Z7BG1 Arachis hypogaea HOM05D000176 ORTHO05D000106 2.4e-06 55.5 59 44.1
arahy.Tifrunner.gnm1.ann1.KMJD99 Arachis hypogaea HOM05D000176 ORTHO05D000106 2.4e-06 55.5 59 44.1
arahy.Tifrunner.gnm1.ann1.TQC5S0 Arachis hypogaea HOM05D000176 ORTHO05D000106 2.4e-06 55.5 58 44.8
arahy.Tifrunner.gnm1.ann1.U5X9DG Arachis hypogaea HOM05D000176 ORTHO05D000106 2.4e-06 55.5 59 44.1
arahy.Tifrunner.gnm1.ann1.YRK7UU Arachis hypogaea HOM05D000176 ORTHO05D000106 2.4e-06 55.5 70 41.4
BcaB06g28031 Brassica carinata HOM05D000176 ORTHO05D000106 2.4e-06 55.5 77 41.6
QL04p082359 Quercus lobata HOM05D000176 ORTHO05D000106 2.4e-06 55.5 60 46.7
QL04p082377 Quercus lobata HOM05D000176 ORTHO05D000106 2.4e-06 55.5 60 46.7
Solyc12g006100.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.4e-06 55.5 60 43.3
AL3G42490 Arabidopsis lyrata HOM05D000176 ORTHO05D000106 3.1e-06 55.1 54 50.0
AT2G04865 Arabidopsis thaliana HOM05D000176 ORTHO05D000106 3.1e-06 55.1 54 50.0
arahy.Tifrunner.gnm1.ann1.AKJN15 Arachis hypogaea HOM05D000176 ORTHO05D000106 3.1e-06 55.1 59 42.4
arahy.Tifrunner.gnm1.ann1.B81Q5B Arachis hypogaea HOM05D000176 ORTHO05D000106 3.1e-06 55.1 59 42.4
arahy.Tifrunner.gnm1.ann1.X7AT2Z Arachis hypogaea HOM05D000176 ORTHO05D000106 3.1e-06 55.1 59 42.4
CSS0002500 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.1e-06 55.1 53 54.7
CSS0014815 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.1e-06 55.1 53 54.7
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 3.1e-06 55.1 53 54.7
CSS0045164 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.1e-06 55.1 53 54.7
Ca_23329_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.1e-06 55.1 53 52.8
ECA240G4387 Erigeron canadensis HOM05D000176 ORTHO05D000106 3.1e-06 55.1 53 52.8
Gorai.010G058500 Gossypium raimondii HOM05D000176 ORTHO05D000106 3.1e-06 55.1 62 46.8
HanXRQChr09g0246821 Helianthus annuus HOM05D000176 ORTHO05D000106 3.1e-06 55.1 53 54.7
QL05p010466 Quercus lobata HOM05D000176 ORTHO05D000106 3.1e-06 55.1 53 52.8
Sopen12g002060 Solanum pennellii HOM05D000176 ORTHO05D003511 3.1e-06 55.1 63 41.3
arahy.Tifrunner.gnm1.ann1.66IYDW Arachis hypogaea HOM05D000176 ORTHO05D000106 4.1e-06 54.7 59 44.1
arahy.Tifrunner.gnm1.ann1.LPR03G Arachis hypogaea HOM05D000176 ORTHO05D000106 4.1e-06 54.7 59 45.8
arahy.Tifrunner.gnm1.ann1.WH3IS9 Arachis hypogaea HOM05D000176 ORTHO05D000106 4.1e-06 54.7 59 42.4
BcaC02g08378 Brassica carinata HOM05D000176 ORTHO05D000106 4.1e-06 54.7 64 43.8
C04p55010 Brassica napus HOM05D000176 ORTHO05D000106 4.1e-06 54.7 64 43.8
Cc03_g14530 Coffea canephora HOM05D000176 ORTHO05D000106 4.1e-06 54.7 53 52.8
Oeu049413.1 Olea europaea HOM05D000176 ORTHO05D000106 4.1e-06 54.7 62 41.9
QL02p062649 Quercus lobata HOM05D000176 ORTHO05D000106 4.1e-06 54.7 62 46.8
QL03p060265 Quercus lobata HOM05D000176 ORTHO05D000106 4.1e-06 54.7 62 46.8
QL07p030448 Quercus lobata HOM05D003979 ORTHO05D000106 4.1e-06 54.7 66 47.0
QL10p054240 Quercus lobata HOM05D000176 ORTHO05D000106 4.1e-06 54.7 62 46.8
QL12p036511 Quercus lobata HOM05D000176 ORTHO05D000106 4.1e-06 54.7 62 46.8
Rhsim06G0121800 Rhododendron simsii HOM05D000176 ORTHO05D000106 4.1e-06 54.7 53 50.9
SGA_v2.0_scaffold42G15967 Striga asiatica HOM05D000176 ORTHO05D000106 4.1e-06 54.7 59 44.1
arahy.Tifrunner.gnm1.ann1.3CVE4A Arachis hypogaea HOM05D000176 ORTHO05D000106 5.3e-06 54.3 59 42.4
BolC4t27041H Brassica oleracea HOM05D000176 ORTHO05D000106 5.3e-06 54.3 64 43.8
Oeu017988.1 Olea europaea HOM05D000176 ORTHO05D000106 5.3e-06 54.3 62 41.9
Oeu049416.1 Olea europaea HOM05D000176 ORTHO05D000106 5.3e-06 54.3 62 41.9
QL06p013007 Quercus lobata HOM05D000176 ORTHO05D000106 5.3e-06 54.3 61 44.3
RcHm_v2.0_Chr2g0143601 Rosa chinensis HOM05D000176 ORTHO05D000106 5.3e-06 54.3 48 58.3
Aa31sc83G70 Aethionema arabicum HOM05D000176 ORTHO05D000106 6.9e-06 53.9 83 41.0
arahy.Tifrunner.gnm1.ann1.909AJ0 Arachis hypogaea HOM05D000176 ORTHO05D000106 6.9e-06 53.9 59 44.1
arahy.Tifrunner.gnm1.ann1.D4Y2BQ Arachis hypogaea HOM05D000176 ORTHO05D000106 6.9e-06 53.9 58 41.4
arahy.Tifrunner.gnm1.ann1.JTPM3R Arachis hypogaea HOM05D000176 ORTHO05D000106 6.9e-06 53.9 54 44.4
arahy.Tifrunner.gnm1.ann1.N375TZ Arachis hypogaea HOM05D000176 ORTHO05D000106 6.9e-06 53.9 57 42.1
arahy.Tifrunner.gnm1.ann1.VCW6KL Arachis hypogaea HOM05D000176 ORTHO05D000106 6.9e-06 53.9 59 49.2
ClCG09G020530 Citrullus lanatus HOM05D000176 ORTHO05D000106 6.9e-06 53.9 50 56.0
Ciclev10014335m.g Citrus clementina HOM05D000176 ORTHO05D000106 6.9e-06 53.9 60 45.0
MELO3C002881.2 Cucumis melo HOM05D000176 ORTHO05D000106 6.9e-06 53.9 50 56.0
CsaV3_5G025870 Cucumis sativus L. HOM05D000176 ORTHO05D000106 6.9e-06 53.9 50 56.0
Lsat_1_v5_gn_7_67341 Lactuca sativa HOM05D000176 ORTHO05D000106 6.9e-06 53.9 53 52.8
Lj4C456T1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-06 53.9 45 55.6
MD09G1191600 Malus domestica HOM05D000176 ORTHO05D000106 6.9e-06 53.9 56 50.0
Prupe.4G252400 Prunus persica HOM05D000176 ORTHO05D000106 6.9e-06 53.9 53 52.8
QL01p018788 Quercus lobata HOM05D000176 ORTHO05D000106 6.9e-06 53.9 61 49.2
QL05p048284 Quercus lobata HOM05D000176 ORTHO05D000106 6.9e-06 53.9 59 47.5
QL05p088783 Quercus lobata HOM05D000176 ORTHO05D000106 6.9e-06 53.9 59 47.5
QL08p006787 Quercus lobata HOM05D000176 ORTHO05D000106 6.9e-06 53.9 59 47.5
QL10p063859 Quercus lobata HOM05D000176 ORTHO05D000106 6.9e-06 53.9 59 47.5
AL4G16100 Arabidopsis lyrata HOM05D000176 ORTHO05D000106 9.1e-06 53.5 64 42.2
AT2G25010 Arabidopsis thaliana HOM05D000176 ORTHO05D000106 9.1e-06 53.5 64 42.2
arahy.Tifrunner.gnm1.ann1.2EPA87 Arachis hypogaea HOM05D000176 ORTHO05D000106 9.1e-06 53.5 60 45.0
arahy.Tifrunner.gnm1.ann1.3EM8Q3 Arachis hypogaea HOM05D000176 ORTHO05D000106 9.1e-06 53.5 54 44.4
arahy.Tifrunner.gnm1.ann1.BDW5FR Arachis hypogaea HOM05D000176 ORTHO05D000106 9.1e-06 53.5 60 45.0
arahy.Tifrunner.gnm1.ann1.CHPB1P Arachis hypogaea HOM05D000176 ORTHO05D000106 9.1e-06 53.5 59 49.2
arahy.Tifrunner.gnm1.ann1.E9Z6QU Arachis hypogaea HOM05D000176 ORTHO05D000106 9.1e-06 53.5 54 44.4
arahy.Tifrunner.gnm1.ann1.I7F1GK Arachis hypogaea HOM05D000176 ORTHO05D000106 9.1e-06 53.5 59 42.4
Duzib138G0102 Durio zibethinus HOM05D000176 ORTHO05D000106 9.1e-06 53.5 60 45.0
ECA246G2274 Erigeron canadensis HOM05D000176 ORTHO05D000106 9.1e-06 53.5 71 38.0
Thhalv10000135m.g Eutrema salsugineum HOM05D000176 ORTHO05D000106 9.1e-06 53.5 64 42.2
FvH4_6g33711 Fragaria vesca HOM05D000176 ORTHO05D000106 9.1e-06 53.5 48 58.3
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 9.1e-06 53.5 59 42.4
Prupe.3G047800 Prunus persica HOM05D000176 ORTHO05D000106 9.1e-06 53.5 56 50.0
Sp4g03990 Schrenkiella parvula HOM05D000176 ORTHO05D000106 9.1e-06 53.5 64 42.2
Sed0026480 Sechium edule HOM05D000176 ORTHO05D000106 9.1e-06 53.5 50 56.0
Solyc04g071530.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.1e-06 53.5 62 45.2
Sopen06g004480 Solanum pennellii HOM05D000176 ORTHO05D000106 9.1e-06 53.5 62 45.2


User provided reference genes

Program Settings