Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0767G107 Amborella trichopoda HOM05D005492 ORTHO05D006911 1.5e-103 379.4 176 100.0
Rhsim07G0214900 Rhododendron simsii HOM05D005492 ORTHO05D006911 3.9e-88 328.2 172 84.9
vmacro04619 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 8.8e-88 327.0 169 87.6
vmacro21373 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 4.4e-87 324.7 173 85.0
Eucgr.F00462 Eucalyptus grandis HOM05D005492 ORTHO05D006911 5.7e-87 324.3 169 86.4
MBI16_g26726_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 5.7e-87 324.3 173 85.5
MSTRG.24417 Avicennia marina HOM05D005492 ORTHO05D006911 7.4e-87 323.9 169 86.4
Sc02g0008380 Simmondsia chinensis HOM05D005492 ORTHO05D006911 9.7e-87 323.6 169 85.8
TWI32G1091 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 1.3e-86 323.2 173 84.4
MD08G1209200 Malus domestica HOM05D005492 ORTHO05D006911 1.7e-86 322.8 173 83.8
SEGI_29138 Sequoiadendron giganteum HOM05D005492 ORTHO05D006911 1.7e-86 322.8 173 85.0
Cpa.g.sc160.3 Carica papaya HOM05D005492 ORTHO05D006911 2.2e-86 322.4 169 85.2
Duzib041G0144 Durio zibethinus HOM05D005492 ORTHO05D006911 2.8e-86 322.0 169 85.2
Hma1.2p1_1548F.1_g290020 Hydrangea macrophylla HOM05D005492 ORTHO05D006911 2.8e-86 322.0 169 85.8
Prupe.1G541400 Prunus persica HOM05D005492 ORTHO05D006911 2.8e-86 322.0 173 83.8
THA.LOC104800327 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 2.8e-86 322.0 173 83.2
Thecc.08G078100 Theobroma cacao HOM05D005492 ORTHO05D006911 2.8e-86 322.0 169 85.8
TAR628G0115 Trochodendron aralioides HOM05D005492 ORTHO05D006911 2.8e-86 322.0 169 86.4
Manes.18G054601 Manihot esculenta HOM05D005492 ORTHO05D006911 4.8e-86 321.2 173 84.4
Oeu026363.1 Olea europaea HOM05D005492 ORTHO05D006911 4.8e-86 321.2 169 85.2
QL12p040192 Quercus lobata HOM05D005492 ORTHO05D006911 4.8e-86 321.2 169 85.2
CiPaw.15G151700 Carya illinoinensis HOM05D005492 ORTHO05D006911 6.3e-86 320.9 169 85.2
Glyma.06G091400 Glycine max HOM05D005492 ORTHO05D006911 6.3e-86 320.9 169 84.6
RcHm_v2.0_Chr7g0232851 Rosa chinensis HOM05D005492 ORTHO05D006911 6.3e-86 320.9 173 83.2
BolC3t19680H Brassica oleracea HOM05D005492 ORTHO05D006911 8.2e-86 320.5 173 83.2
Ciclev10002666m.g Citrus clementina HOM05D005492 ORTHO05D006911 8.2e-86 320.5 173 83.8
Cc10_g08150 Coffea canephora HOM05D005492 ORTHO05D006911 8.2e-86 320.5 168 85.7
FAN04G2818 Fragaria x ananassa HOM05D005492 ORTHO05D006911 8.2e-86 320.5 173 83.2
PGR083G0175 Punica granatum HOM05D005492 ORTHO05D006911 8.2e-86 320.5 169 85.8
SGA_v2.0_scaffold28G11869 Striga asiatica HOM05D005492 ORTHO05D006911 8.2e-86 320.5 169 84.0
Duzib041G0066 Durio zibethinus HOM05D005492 ORTHO05D006911 1.1e-85 320.1 169 84.6
Gohir.A05G264075 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.1e-85 320.1 169 84.6
Gohir.A06G029400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.1e-85 320.1 169 84.6
Gohir.D05G266500 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.1e-85 320.1 169 84.6
Gohir.D06G028400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.1e-85 320.1 169 84.6
Gorai.009G278400 Gossypium raimondii HOM05D005492 ORTHO05D006911 1.1e-85 320.1 169 84.6
MD15G1393200 Malus domestica HOM05D005492 ORTHO05D006911 1.1e-85 320.1 173 83.2
arahy.Tifrunner.gnm1.ann1.7IN1UY Arachis hypogaea HOM05D005492 ORTHO05D006911 1.4e-85 319.7 173 83.8
arahy.Tifrunner.gnm1.ann1.EMS59G Arachis hypogaea HOM05D005492 ORTHO05D006911 1.4e-85 319.7 173 83.8
BcaC06g35300 Brassica carinata HOM05D005492 ORTHO05D006911 1.4e-85 319.7 173 82.7
Carub.0001s2610 Capsella rubella HOM05D005492 ORTHO05D006911 1.4e-85 319.7 173 82.7
Dinv22020 Davidia involucrata HOM05D005492 ORTHO05D006911 1.4e-85 319.7 173 84.4
Migut.N02829 Erythranthe guttata HOM05D005492 ORTHO05D006911 1.4e-85 319.7 171 84.2
Migut.O00437 Erythranthe guttata HOM05D005492 ORTHO05D006911 1.4e-85 319.7 171 84.2
Thhalv10008910m.g Eutrema salsugineum HOM05D005492 ORTHO05D006911 1.4e-85 319.7 173 82.1
FAN08G0693 Fragaria x ananassa HOM05D005492 ORTHO05D006911 1.4e-85 319.7 173 83.2
FAN18G0360 Fragaria x ananassa HOM05D005492 ORTHO05D006911 1.4e-85 319.7 173 83.2
A07p11710 Brassica napus HOM05D005492 ORTHO05D006911 1.8e-85 319.3 173 82.7
A08p26210 Brassica napus HOM05D005492 ORTHO05D006911 1.8e-85 319.3 173 82.7
C03p74220 Brassica napus HOM05D005492 ORTHO05D006911 1.8e-85 319.3 173 82.7
BolC7t42275H Brassica oleracea HOM05D005492 ORTHO05D006911 1.8e-85 319.3 173 82.7
BraA07t28956Z Brassica rapa HOM05D005492 ORTHO05D006911 1.8e-85 319.3 173 82.7
BraA08t34572Z Brassica rapa HOM05D005492 ORTHO05D006911 1.8e-85 319.3 173 82.7
CsaV3_3G048290 Cucumis sativus L. HOM05D005492 ORTHO05D006911 1.8e-85 319.3 173 83.8
VMungo1309G2191 Vigna mungo HOM05D005492 ORTHO05D006911 1.8e-85 319.3 173 83.8
BcaC01g01601 Brassica carinata HOM05D005492 ORTHO05D006911 2.4e-85 318.9 173 82.7
BcaC01g06944 Brassica carinata HOM05D005492 ORTHO05D006911 2.4e-85 318.9 173 82.1
CARHR027130 Cardamine hirsuta HOM05D005492 ORTHO05D006911 2.4e-85 318.9 173 82.1
COL.COLO4_35339 Corchorus olitorius HOM05D005492 ORTHO05D006911 2.4e-85 318.9 169 84.6
Dinv44895 Davidia involucrata HOM05D005492 ORTHO05D006911 2.4e-85 318.9 173 83.8
Actinidia19266 Actinidia chinensis HOM05D005492 ORTHO05D006911 3.1e-85 318.5 173 83.2
Sp1g23790 Schrenkiella parvula HOM05D005492 ORTHO05D006911 3.1e-85 318.5 173 82.1
BcaC05g26754 Brassica carinata HOM05D005492 ORTHO05D006911 4.1e-85 318.2 173 82.7
C07p17680 Brassica napus HOM05D005492 ORTHO05D006911 4.1e-85 318.2 173 82.1
Glyma.04G089600 Glycine max HOM05D005492 ORTHO05D006911 4.1e-85 318.2 169 84.0
Lj1g0026792 Lotus japonicus HOM05D005492 ORTHO05D006911 4.1e-85 318.2 173 83.2
Oeu002945.1 Olea europaea HOM05D005492 ORTHO05D006911 4.1e-85 318.2 169 84.6
Potri.002G107600 Populus trichocarpa HOM05D005492 ORTHO05D006911 4.1e-85 318.2 173 83.8
Sabra02G0084500 Salix brachista HOM05D005492 ORTHO05D006911 4.1e-85 318.2 173 83.8
TWI12G1341 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 4.1e-85 318.2 173 83.2
GSVIVG01009242001 Vitis vinifera HOM05D005492 ORTHO05D006911 4.1e-85 318.2 173 83.8
AL1G40960 Arabidopsis lyrata HOM05D005492 ORTHO05D006911 5.3e-85 317.8 173 82.1
AT1G27530 Arabidopsis thaliana HOM05D005492 ORTHO05D006911 5.3e-85 317.8 173 82.1
Aa31LG7G10120 Aethionema arabicum HOM05D005492 ORTHO05D006911 7.0e-85 317.4 170 83.5
CANSAT35G2015 Cannabis sativa HOM05D005492 ORTHO05D006911 7.0e-85 317.4 173 82.7
Gorai.010G031300 Gossypium raimondii HOM05D005492 ORTHO05D006911 7.0e-85 317.4 169 84.0
Actinidia10257 Actinidia chinensis HOM05D005492 ORTHO05D006911 9.1e-85 317.0 173 83.2
Ah.00g000130 Amaranthus hybridus HOM05D005492 ORTHO05D006911 9.1e-85 317.0 169 82.8
Cfa020694 Carpinus fangiana HOM05D005492 ORTHO05D006911 9.1e-85 317.0 169 84.6
Haze_18999 Corylus avellana HOM05D005492 ORTHO05D006911 9.1e-85 317.0 169 84.6
Lalb_Chr08g0242711 Lupinus albus HOM05D005492 ORTHO05D006911 9.1e-85 317.0 173 82.7
Medtr3g111110 Medicago truncatula HOM05D005492 ORTHO05D006911 9.1e-85 317.0 173 83.2
AUR62035408 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.2e-84 316.6 168 83.3
AUR62035696 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.2e-84 316.6 168 83.3
Psat5g017920 Pisum sativum HOM05D005492 ORTHO05D006911 1.2e-84 316.6 173 82.7
CSS0048416 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 1.6e-84 316.2 173 83.2
CDE04G0412 Ceratophyllum demersum HOM05D005492 ORTHO05D006911 2.0e-84 315.8 173 83.2
Nitab4.5_0000377g0170 Nicotiana tabacum HOM05D005492 ORTHO05D006911 2.0e-84 315.8 173 82.7
Nitab4.5_0005557g0040 Nicotiana tabacum HOM05D005492 ORTHO05D006911 2.0e-84 315.8 173 82.7
unitig_8.g4867 Utricularia gibba HOM05D002193 ORTHO05D002631 2.0e-84 315.8 165 84.2
BcaB03g13980 Brassica carinata HOM05D005492 ORTHO05D006911 3.5e-84 315.1 173 81.5
Lsat_1_v5_gn_9_81101 Lactuca sativa HOM05D005492 ORTHO05D006911 4.5e-84 314.7 169 84.0
Aqoxy5G01947 Aquilegia oxysepala HOM05D005492 ORTHO05D006911 5.9e-84 314.3 172 83.7
Ca_15548_v3 Cicer arietinum L. HOM05D005492 ORTHO05D006911 5.9e-84 314.3 173 82.1
Duzib116G0911 Durio zibethinus HOM05D005492 ORTHO05D006911 5.9e-84 314.3 165 85.5
HanXRQChr01g0001771 Helianthus annuus HOM05D005492 ORTHO05D006911 5.9e-84 314.3 173 82.7
Lj4A81T75 Lonicera japonica HOM05D005492 ORTHO05D006911 5.9e-84 314.3 169 82.8
Solyc04g076890.4 Solanum lycopersicum HOM05D005492 ORTHO05D006911 5.9e-84 314.3 173 82.1
Sopen04g030660 Solanum pennellii HOM05D005492 ORTHO05D006911 5.9e-84 314.3 173 82.1
PGSC0003DMG400006380 Solanum tuberosum HOM05D005492 ORTHO05D006911 5.9e-84 314.3 173 82.1
TPR.G12370 Trifolium pratense HOM05D005492 ORTHO05D006911 1.3e-83 313.2 176 81.2
CAN.G723.31 Capsicum annuum HOM05D005492 ORTHO05D006911 2.2e-83 312.4 173 80.9
Sed0023469 Sechium edule HOM05D005492 ORTHO05D006911 2.2e-83 312.4 169 82.8
PSO210G2227 Papaver somniferum HOM05D005492 ORTHO05D006911 3.8e-83 311.6 169 82.2
PSO761G0095 Papaver somniferum HOM05D005492 ORTHO05D006911 3.8e-83 311.6 169 82.2
ECA232G4293 Erigeron canadensis HOM05D005492 ORTHO05D006911 5.0e-83 311.2 169 82.8
Mapoly0013s0107 Marchantia polymorpha HOM05D005492 ORTHO05D006911 5.0e-83 311.2 164 82.3
MSTRG.22188 Avicennia marina HOM05D005492 ORTHO05D006911 5.5e-82 307.8 169 83.4
HPP92_010753 Vanilla planifolia HOM05D005492 ORTHO05D006911 5.5e-82 307.8 172 82.0
Pp3c16_2350 Physcomitrium patens HOM05D005492 ORTHO05D006911 4.7e-81 304.7 172 77.3
Atru.BG.248.p Acer truncatum HOM05D005492 ORTHO05D006911 3.0e-80 302.0 169 79.9
TAR381G0934 Trochodendron aralioides HOM05D005492 ORTHO05D006911 3.0e-80 302.0 173 82.1
CBR_g37394 Chara braunii HOM05D005492 ORTHO05D006911 6.7e-80 300.8 163 79.1
Os10g0205200 Oryza sativa ssp. japonica HOM05D005492 ORTHO05D006911 1.3e-78 296.6 165 80.6
Zm00001eb010950 Zea mays HOM05D005492 ORTHO05D006911 6.3e-78 294.3 165 78.8
Hund05232 Selenicereus undatus HOM05D005492 ORTHO05D006911 1.4e-77 293.1 242 60.7
ClCG11G014860 Citrullus lanatus HOM05D005492 ORTHO05D006911 4.7e-73 278.1 150 83.3
Cre02.g142350 Chlamydomonas reinhardtii HOM05D005492 ORTHO05D006911 1.6e-68 263.1 161 70.2
PRCOL_00001807 Prasinoderma coloniale HOM05D005492 ORTHO05D006911 4.5e-68 261.5 163 66.9
Peaxi162Scf00626g00718 Petunia axillaris HOM05D005492 ORTHO05D006911 3.8e-67 258.5 179 69.8
DCAR_009548 Daucus carota HOM05D005492 ORTHO05D006911 7.5e-63 244.2 130 83.8
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 4.9e-62 241.5 170 69.4
Phvul.009G146200 Phaseolus vulgaris HOM05D005492 ORTHO05D006911 8.3e-62 240.7 129 82.9
TAR381G1662 Trochodendron aralioides HOM05D005492 ORTHO05D006911 4.1e-61 238.4 129 82.9
Haze_27628 Corylus avellana HOM05D005492 ORTHO05D006911 1.7e-54 216.5 168 56.5
Atru.chr13.934 Acer truncatum HOM05D005492 ORTHO05D006911 1.2e-52 210.3 123 76.4
Duzib093G0511 Durio zibethinus HOM05D005492 ORTHO05D006911 4.6e-52 208.4 113 79.6
MELO3C003490.2 Cucumis melo HOM05D005492 ORTHO05D006911 1.1e-48 197.2 122 73.8
FvH4_5g33720 Fragaria vesca HOM05D005492 ORTHO05D006911 1.1e-48 197.2 110 80.9
THA.LOC104807850 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 1.5e-47 193.4 123 70.7
AagrBONN_evm.TU.Sc2ySwM_369.477 Anthoceros agrestis HOM05D005492 ORTHO05D006911 2.6e-47 192.6 109 78.9
MBI16_g14677_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 3.7e-46 188.7 112 79.5
Prupe.7G085600 Prunus persica HOM05D005492 ORTHO05D006911 1.3e-43 180.3 104 78.8
Nn2g14030 Nelumbo nucifera HOM05D005492 ORTHO05D006911 3.9e-43 178.7 141 63.8
MD08G1145300 Malus domestica HOM05D005492 ORTHO05D006911 7.1e-37 157.9 93 76.3
CSS0004398 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 7.3e-34 147.9 93 72.0
MD05G1007500 Malus domestica HOM05D005492 ORTHO05D006911 9.9e-31 137.5 113 61.1
Dinv07042 Davidia involucrata HOM05D005492 ORTHO05D185078 1.3e-27 127.1 179 41.9
MD16G1251000 Malus domestica HOM05D005492 ORTHO05D245813 1.1e-26 124.0 110 56.4
Nn5g29750 Nelumbo nucifera HOM05D005492 ORTHO05D006911 5.6e-26 121.7 62 88.7
MD00G1203800 Malus domestica HOM05D005492 ORTHO05D247194 9.6e-18 94.4 93 49.5


User provided reference genes

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