Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0767G089 Amborella trichopoda HOM05D005482 ORTHO05D006502 2.0e-161 572.4 299 100.0
MBI16_g31257_MAGBIO Magnolia biondii HOM05D005482 ORTHO05D006502 2.0e-68 263.5 298 48.0
TAR625G0934 Trochodendron aralioides HOM05D005482 ORTHO05D006502 4.2e-66 255.8 280 47.9
PSO170G0154 Papaver somniferum HOM05D005482 ORTHO05D006502 4.4e-63 245.7 278 46.8
PSO210G6830 Papaver somniferum HOM05D005482 ORTHO05D006502 5.7e-63 245.4 278 46.8
Dinv36943 Davidia involucrata HOM05D005482 ORTHO05D006502 1.8e-61 240.4 279 46.2
CSS0030560 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 9.1e-61 238.0 280 46.1
Nn1g05603 Nelumbo nucifera HOM05D005482 ORTHO05D006502 1.6e-60 237.3 260 46.2
Dinv13587 Davidia involucrata HOM05D005482 ORTHO05D006502 2.7e-60 236.5 279 47.3
Aqoxy5G01366 Aquilegia oxysepala HOM05D005482 ORTHO05D006502 2.9e-59 233.0 272 46.7
Lj2A532G30 Lonicera japonica HOM05D005482 ORTHO05D006502 1.5e-58 230.7 279 45.2
Hma1.2p1_0369F.1_g137400 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 9.4e-58 228.0 288 45.5
QL06p035944 Quercus lobata HOM05D005482 ORTHO05D006502 1.6e-57 227.3 277 45.1
CiPaw.07G046300 Carya illinoinensis HOM05D005482 ORTHO05D006502 4.7e-57 225.7 277 45.1
Prupe.6G203300 Prunus persica HOM05D005482 ORTHO05D006502 2.3e-56 223.4 299 43.5
Gohir.A12G084900 Gossypium hirsutum HOM05D005482 ORTHO05D006502 1.2e-55 221.1 273 43.6
Gohir.D12G079700 Gossypium hirsutum HOM05D005482 ORTHO05D006502 1.5e-55 220.7 273 43.2
RcHm_v2.0_Chr2g0110941 Rosa chinensis HOM05D005482 ORTHO05D006502 3.4e-55 219.5 300 43.3
MELO3C007709.2 Cucumis melo HOM05D005482 ORTHO05D006502 5.7e-55 218.8 303 43.6
Cfa006872 Carpinus fangiana HOM05D005482 ORTHO05D006502 7.5e-55 218.4 278 43.5
Haze_03890 Corylus avellana HOM05D005482 ORTHO05D006502 7.5e-55 218.4 286 42.3
CsaV3_6G044940 Cucumis sativus L. HOM05D005482 ORTHO05D006502 7.5e-55 218.4 303 43.6
Gorai.008G093000 Gossypium raimondii HOM05D005482 ORTHO05D006502 9.8e-55 218.0 273 42.9
ClCG01G018310 Citrullus lanatus HOM05D005482 ORTHO05D006502 2.8e-54 216.5 303 43.6
FAN23G0007 Fragaria x ananassa HOM05D005482 ORTHO05D006502 2.8e-54 216.5 273 43.6
MD01G1040900 Malus domestica HOM05D005482 ORTHO05D006502 3.7e-54 216.1 298 41.6
Cpa.g.sc55.13 Carica papaya HOM05D005482 ORTHO05D006502 6.3e-54 215.3 272 44.9
FvH4_1g19490 Fragaria vesca HOM05D005482 ORTHO05D006502 6.3e-54 215.3 294 41.8
Sed0012268 Sechium edule HOM05D005482 ORTHO05D006502 8.3e-54 214.9 279 43.7
MD15G1310400 Malus domestica HOM05D005482 ORTHO05D006502 1.4e-53 214.2 278 43.5
CiPaw.08G141000 Carya illinoinensis HOM05D005482 ORTHO05D006502 3.1e-53 213.0 279 44.8
Thecc.01G089100 Theobroma cacao HOM05D005482 ORTHO05D006502 3.1e-53 213.0 273 42.5
FAN19G3176 Fragaria x ananassa HOM05D005482 ORTHO05D006502 7.0e-53 211.8 294 41.5
FAN26G3253 Fragaria x ananassa HOM05D005482 ORTHO05D006502 9.1e-53 211.5 274 42.0
CSS0020800 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 2.7e-52 209.9 279 43.0
FAN28G0477 Fragaria x ananassa HOM05D005482 ORTHO05D006502 2.7e-52 209.9 273 42.5
Rhsim08G0017200 Rhododendron simsii HOM05D005482 ORTHO05D006502 7.7e-52 208.4 300 39.7
Cc07_g13970 Coffea canephora HOM05D005482 ORTHO05D006502 5.5e-50 202.2 300 41.0
TWI77G0993 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 5.5e-50 202.2 291 41.6
PGSC0003DMG400014586 Solanum tuberosum HOM05D005482 ORTHO05D006502 9.5e-50 201.4 276 42.0
Duzib264G1263 Durio zibethinus HOM05D005482 ORTHO05D006502 2.8e-49 199.9 259 42.5
Nitab4.5_0007769g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 2.8e-49 199.9 278 42.4
vmacro18548 Vaccinium macrocarpon HOM05D005482 ORTHO05D006502 2.8e-49 199.9 302 40.4
MSTRG.23386 Avicennia marina HOM05D005482 ORTHO05D006502 6.1e-49 198.7 278 41.7
COL.COLO4_27370 Corchorus olitorius HOM05D005482 ORTHO05D006502 6.1e-49 198.7 271 41.3
Solyc05g051370.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 8.0e-49 198.4 275 42.2
Nitab4.5_0000128g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 1.8e-48 197.2 278 41.7
CAN.G581.10 Capsicum annuum HOM05D005482 ORTHO05D006502 5.2e-48 195.7 275 40.4
CANSAT01G3178 Cannabis sativa HOM05D005482 ORTHO05D006502 6.8e-48 195.3 277 41.9
Eucgr.H02447 Eucalyptus grandis HOM05D005482 ORTHO05D006502 1.2e-47 194.5 296 39.2
Actinidia24562 Actinidia chinensis HOM05D005482 ORTHO05D006502 1.5e-47 194.1 211 49.3
TWI74G1080 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 1.5e-47 194.1 274 40.9
Sopen05g029760 Solanum pennellii HOM05D005482 ORTHO05D006502 5.7e-47 192.2 294 40.5
Peaxi162Scf01142g00001 Petunia axillaris HOM05D005482 ORTHO05D006502 1.3e-46 191.0 276 40.9
SGA_v2.0_scaffold108G30927 Striga asiatica HOM05D005482 ORTHO05D006502 2.8e-46 189.9 275 40.7
SalBow3G1020 Salvia bowleyana HOM05D005482 ORTHO05D006502 1.2e-44 184.5 283 40.6
DCAR_003442 Daucus carota HOM05D005482 ORTHO05D006502 1.6e-44 184.1 272 40.8
Hund16521 Selenicereus undatus HOM05D005482 ORTHO05D006502 2.0e-44 183.7 263 39.9
AUR62017985 Chenopodium quinoa HOM05D005482 ORTHO05D006502 6.6e-43 178.7 274 39.1
PGR102G1704 Punica granatum HOM05D005482 ORTHO05D006502 8.6e-43 178.3 273 40.7
Atru.chr3.678 Acer truncatum HOM05D005482 ORTHO05D006502 1.9e-42 177.2 275 40.0
Sc03g0000430 Simmondsia chinensis HOM05D005482 ORTHO05D006502 1.9e-42 177.2 274 40.1
Lalb_Chr16g0381591 Lupinus albus HOM05D005482 ORTHO05D006502 3.3e-42 176.4 279 37.3
Ciclev10025202m.g Citrus clementina HOM05D005482 ORTHO05D006502 4.3e-42 176.0 292 38.7
Migut.H02285 Erythranthe guttata HOM05D005482 ORTHO05D006502 7.3e-42 175.3 274 40.5
Atru.chr3.724 Acer truncatum HOM05D005482 ORTHO05D006502 9.5e-42 174.9 275 39.6
Sabra15G0071300 Salix brachista HOM05D005482 ORTHO05D006502 8.0e-41 171.8 258 41.9
EL10Ac6g15187 Beta vulgaris HOM05D005482 ORTHO05D006502 3.1e-40 169.9 279 36.6
THA.LOC104798625 Tarenaya hassleriana HOM05D005482 ORTHO05D006502 3.1e-40 169.9 278 37.1
Manes.12G125300 Manihot esculenta HOM05D005482 ORTHO05D006502 5.2e-40 169.1 276 38.8
Sabra07G0009200 Salix brachista HOM05D005482 ORTHO05D006502 8.9e-40 168.3 258 41.1
Potri.007G011800 Populus trichocarpa HOM05D005482 ORTHO05D006502 1.2e-39 167.9 259 40.9
Ah.03g139850 Amaranthus hybridus HOM05D005482 ORTHO05D006502 1.5e-39 167.5 268 36.2
Lsat_1_v5_gn_3_62981 Lactuca sativa HOM05D005482 ORTHO05D006502 2.6e-39 166.8 278 36.7
Os03g0802300 Oryza sativa ssp. japonica HOM05D005482 ORTHO05D006502 5.8e-39 165.6 256 38.7
Thhalv10003865m.g Eutrema salsugineum HOM05D005482 ORTHO05D006502 7.5e-39 165.2 277 36.5
Oeu042113.2 Olea europaea HOM05D005482 ORTHO05D006502 9.8e-39 164.9 280 38.2
ECA246G0291 Erigeron canadensis HOM05D005482 ORTHO05D006502 2.2e-38 163.7 277 35.7
Sp2g28640 Schrenkiella parvula HOM05D005482 ORTHO05D006502 2.2e-38 163.7 278 35.3
HPP92_017563 Vanilla planifolia HOM05D005482 ORTHO05D006502 3.7e-38 162.9 294 36.7
Carub.0008s2640 Capsella rubella HOM05D005482 ORTHO05D006502 8.3e-38 161.8 276 35.1
CARHR279520 Cardamine hirsuta HOM05D005482 ORTHO05D006502 1.1e-37 161.4 278 34.5
Zm00001eb061260 Zea mays HOM05D005482 ORTHO05D006502 1.4e-37 161.0 255 38.0
AT5G65540 Arabidopsis thaliana HOM05D005482 ORTHO05D006502 3.2e-37 159.8 275 34.5
AL8G43140 Arabidopsis lyrata HOM05D005482 ORTHO05D006502 5.4e-37 159.1 272 34.6
Oeu017109.1 Olea europaea HOM05D005482 ORTHO05D006502 1.7e-35 154.1 285 36.1
Aa31LG3G16620 Aethionema arabicum HOM05D005482 ORTHO05D006502 2.3e-35 153.7 276 34.8
arahy.Tifrunner.gnm1.ann1.52LQAS Arachis hypogaea HOM05D005482 ORTHO05D006502 3.0e-35 153.3 274 34.7
arahy.Tifrunner.gnm1.ann1.HVQN9F Arachis hypogaea HOM05D005482 ORTHO05D006502 3.0e-35 153.3 274 34.7
BraA06t26164Z Brassica rapa HOM05D005482 ORTHO05D006502 5.0e-35 152.5 282 34.0
A06p32390 Brassica napus HOM05D005482 ORTHO05D006502 1.1e-34 151.4 282 34.0
HanXRQChr12g0368991 Helianthus annuus HOM05D005482 ORTHO05D006502 1.5e-34 151.0 260 34.6
Hma1.2p1_0369F.1_g137390 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 2.1e-33 147.1 223 41.3
C03p60440 Brassica napus HOM05D005482 ORTHO05D006502 7.5e-31 138.7 277 32.5
BolC3t18305H Brassica oleracea HOM05D005482 ORTHO05D006502 7.5e-31 138.7 277 32.5
Ca_25228_v3 Cicer arietinum L. HOM05D005482 ORTHO05D006502 1.1e-29 134.8 264 34.1
Lj2g0006088 Lotus japonicus HOM05D005482 ORTHO05D006502 2.1e-28 130.6 259 34.0
Glyma.09G200000 Glycine max HOM05D005482 ORTHO05D006502 4.6e-28 129.4 263 33.1
VMungo1215G0139 Vigna mungo HOM05D005482 ORTHO05D006502 3.0e-27 126.7 288 32.6
Psat3g169840 Pisum sativum HOM05D005482 ORTHO05D006502 1.2e-25 121.3 263 32.3
Glyma.01G021600 Glycine max HOM05D005482 ORTHO05D006502 8.1e-25 118.6 284 30.3
Phvul.002G145800 Phaseolus vulgaris HOM05D005482 ORTHO05D006502 6.8e-24 115.5 283 31.1
Mapoly0105s0033 Marchantia polymorpha HOM05D005482 ORTHO05D006502 2.6e-23 113.6 273 30.8
CDE07G0659 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 3.7e-22 109.8 153 35.3
Medtr5g031750 Medicago truncatula HOM05D005482 ORTHO05D006502 2.4e-21 107.1 285 30.2
TPR.G36831 Trifolium pratense HOM05D005482 ORTHO05D006502 9.2e-21 105.1 259 30.5
BcaC01g02786 Brassica carinata HOM05D005482 ORTHO05D006502 2.7e-20 103.6 174 35.1
AagrBONN_evm.TU.Sc2ySwM_117.475 Anthoceros agrestis HOM05D005482 ORTHO05D006502 5.1e-19 99.4 270 31.9
Pp3c20_16050 Physcomitrium patens HOM05D005482 ORTHO05D006502 8.6e-19 98.6 266 28.6
unitig_736.g22591 Utricularia gibba HOM05D005482 ORTHO05D006502 2.8e-17 93.6 269 28.6
SMO203G0252 Selaginella moellendorffii HOM05D005482 ORTHO05D006502 4.4e-15 86.3 244 27.0
GSVIVG01002523001 Vitis vinifera HOM05D005482 ORTHO05D006502 5.4e-13 79.3 172 32.6
TAR381G1343 Trochodendron aralioides HOM05D005482 ORTHO05D006502 9.2e-13 78.6 68 54.4
BcaC01g02797 Brassica carinata HOM05D005482 ORTHO05D006502 2.5e-10 70.5 113 32.7
RcHm_v2.0_Chr2g0110871 Rosa chinensis HOM05D005482 ORTHO05D006502 9.6e-10 68.6 99 46.5
CDE07G1819 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 2.4e-08 63.9 102 36.3
BcaB04g20020 Brassica carinata HOM05D005482 ORTHO05D006502 1.2e-07 61.6 68 38.2
GSVIVG01002660001 Vitis vinifera HOM05D005482 ORTHO05D006502 1.5e-07 61.2 37 67.6
BolC3t18285H Brassica oleracea HOM05D005482 ORTHO05D006502 4.4e-07 59.7 52 48.1


User provided reference genes

Program Settings