Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 6.6e-162 573.9 281 100.0
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 7.3e-137 490.7 272 86.0
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 6.2e-136 487.6 273 85.3
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 8.1e-136 487.3 272 86.4
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 2.4e-135 485.7 272 85.3
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 2.6e-134 482.3 272 85.7
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 7.6e-134 480.7 271 84.1
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.3e-133 479.9 272 83.8
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.3e-133 479.9 275 84.4
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 3.8e-133 478.4 272 84.6
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 4.9e-133 478.0 272 84.9
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 8.4e-133 477.2 271 84.9
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 1.4e-132 476.5 275 82.2
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.9e-132 476.1 271 84.5
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 5.4e-132 474.6 267 83.5
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 5.4e-132 474.6 271 84.5
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 5.4e-132 474.6 272 82.4
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 7.1e-132 474.2 272 83.1
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 7.1e-132 474.2 278 81.7
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 9.3e-132 473.8 271 84.5
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 2.1e-131 472.6 271 84.1
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 2.7e-131 472.2 278 80.9
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.6e-131 471.5 272 82.7
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.6e-131 471.5 272 82.7
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 4.6e-131 471.5 272 83.1
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 7.9e-131 470.7 272 82.7
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 7.9e-131 470.7 272 83.1
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.8e-130 469.5 272 82.4
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 1.8e-130 469.5 272 82.7
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 2.3e-130 469.2 278 81.3
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 3.9e-130 468.4 272 82.4
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 3.9e-130 468.4 271 83.4
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 5.1e-130 468.0 273 81.3
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 8.7e-130 467.2 274 82.8
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 1.1e-129 466.8 272 81.2
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 2.5e-129 465.7 266 82.7
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 2.5e-129 465.7 266 82.7
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 3.3e-129 465.3 272 82.7
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 4.3e-129 464.9 271 81.5
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 4.3e-129 464.9 278 79.9
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 4.3e-129 464.9 272 81.6
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 5.6e-129 464.5 278 78.8
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 5.6e-129 464.5 272 80.5
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 7.4e-129 464.2 261 84.3
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 7.4e-129 464.2 273 81.3
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 9.6e-129 463.8 272 80.9
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 9.6e-129 463.8 278 79.1
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 9.6e-129 463.8 272 81.2
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 1.3e-128 463.4 271 82.3
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 1.3e-128 463.4 274 79.2
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 1.3e-128 463.4 278 78.4
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.6e-128 463.0 272 81.2
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.6e-128 463.0 272 81.2
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 1.6e-128 463.0 272 80.9
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 2.1e-128 462.6 273 80.6
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 2.8e-128 462.2 272 81.2
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.8e-128 462.2 273 80.6
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 3.6e-128 461.8 273 79.5
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.2e-128 461.1 272 80.9
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 6.2e-128 461.1 271 81.2
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 6.2e-128 461.1 272 80.9
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 8.1e-128 460.7 271 81.5
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 8.1e-128 460.7 273 79.1
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 8.1e-128 460.7 278 78.4
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 1.1e-127 460.3 270 80.7
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 1.4e-127 459.9 272 81.2
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 1.4e-127 459.9 272 80.9
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.8e-127 459.5 273 78.4
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 1.8e-127 459.5 272 81.6
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.4e-127 459.1 272 79.8
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 3.1e-127 458.8 274 79.9
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 3.1e-127 458.8 272 80.9
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 5.3e-127 458.0 273 80.6
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 5.3e-127 458.0 271 81.2
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.2e-126 456.8 303 74.3
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.2e-126 456.8 271 79.3
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 1.5e-126 456.4 270 80.0
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 5.8e-126 454.5 272 78.7
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 9.9e-126 453.8 271 77.5
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 9.9e-126 453.8 271 77.5
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.7e-125 453.0 272 80.5
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 2.2e-125 452.6 271 77.1
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 2.2e-125 452.6 271 77.1
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 6.4e-125 451.1 266 82.3
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 1.1e-124 450.3 272 79.4
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 3.2e-124 448.7 271 76.4
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 3.2e-124 448.7 271 76.4
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.2e-124 448.4 272 79.8
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 7.1e-124 447.6 271 76.0
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 1.2e-123 446.8 271 76.8
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 2.7e-123 445.7 271 76.4
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 2.7e-123 445.7 273 79.5
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 6.0e-123 444.5 271 76.4
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 6.0e-123 444.5 271 76.0
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 7.9e-123 444.1 311 71.7
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 1.3e-122 443.4 271 75.6
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 6.7e-122 441.0 271 75.6
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 1.9e-121 439.5 271 75.3
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 2.1e-120 436.0 268 77.6
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 2.4e-119 432.6 269 73.6
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 2.4e-119 432.6 269 73.6
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 5.3e-119 431.4 271 72.7
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 5.3e-119 431.4 271 72.7
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 9.0e-119 430.6 266 74.1
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 1.2e-118 430.3 272 78.3
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 3.4e-118 428.7 311 68.2
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.9e-117 425.6 273 73.6
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 6.5e-117 424.5 272 77.6
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 9.3e-116 420.6 275 72.4
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 3.5e-115 418.7 269 72.9
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 6.0e-115 417.9 233 85.0
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.8e-114 416.4 272 76.5
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 3.0e-114 415.6 273 72.2
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 8.7e-114 414.1 272 71.3
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 1.5e-113 413.3 273 72.9
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.2e-110 403.7 268 70.9
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.7e-107 392.5 221 85.1
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 7.2e-100 367.9 267 64.4
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 6.5e-93 344.7 314 60.2
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 2.4e-87 326.2 188 81.9
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 1.9e-84 316.6 184 83.2
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.2e-83 313.9 181 84.0
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 4.1e-79 298.9 271 53.1
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 1.0e-77 294.3 171 80.7
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 1.2e-73 280.8 175 77.7
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 2.6e-73 279.6 278 52.9
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 1.7e-72 276.9 275 54.5
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 2.2e-64 250.0 275 45.1
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.6e-52 208.8 222 52.3
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.2e-51 207.6 219 53.0
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 1.1e-50 204.5 155 67.1
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.1e-47 194.5 292 42.8
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.4e-42 177.6 99 83.8
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.3e-42 176.8 100 82.0
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-39 167.9 94 83.0
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 9.9e-33 144.8 88 77.3
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 3.9e-29 132.9 76 82.9
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 8.7e-21 105.1 164 40.2
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.5e-20 104.4 94 58.5
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.4e-10 71.2 51 64.7
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 2.2e-08 63.9 40 75.0


User provided reference genes

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