Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 6.4e-97 357.5 185 100.0
ATR0144G021 Amborella trichopoda HOM05D007716 ORTHO05D009780 4.6e-39 165.2 87 95.4
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 4.5e-18 95.5 157 36.9
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 5.0e-17 92.0 121 45.5
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 5.0e-17 92.0 148 38.5
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 6.5e-17 91.7 149 39.6
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 6.5e-17 91.7 121 42.1
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.1e-16 90.9 134 38.8
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 1.5e-16 90.5 134 38.8
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 1.9e-16 90.1 124 39.5
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 2.5e-16 89.7 108 46.3
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 3.2e-16 89.4 116 40.5
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 5.5e-16 88.6 107 40.2
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 7.2e-16 88.2 155 34.2
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 7.2e-16 88.2 156 33.3
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 7.2e-16 88.2 124 41.9
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 1.6e-15 87.0 120 43.3
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 2.1e-15 86.7 141 36.9
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 2.1e-15 86.7 120 42.5
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 3.6e-15 85.9 110 40.0
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 3.6e-15 85.9 139 41.0
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 3.6e-15 85.9 148 38.5
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 4.7e-15 85.5 152 34.2
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 4.7e-15 85.5 110 40.9
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 6.1e-15 85.1 134 36.6
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 6.1e-15 85.1 108 39.8
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 8.0e-15 84.7 116 41.4
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 1.0e-14 84.3 116 41.4
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 2.3e-14 83.2 132 34.8
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 4.0e-14 82.4 154 37.0
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 5.2e-14 82.0 119 41.2
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 8.8e-14 81.3 126 41.3
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 8.8e-14 81.3 150 34.0
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 1.2e-13 80.9 126 40.5
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 1.2e-13 80.9 124 36.3
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 1.5e-13 80.5 156 32.7
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 2.0e-13 80.1 106 40.6
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 3.4e-13 79.3 157 35.7
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 3.4e-13 79.3 148 36.5
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 4.4e-13 79.0 116 37.9
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 4.4e-13 79.0 105 38.1
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 5.7e-13 78.6 146 32.2
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 7.5e-13 78.2 152 39.5
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 7.5e-13 78.2 150 34.0
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 7.5e-13 78.2 106 37.7
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 7.5e-13 78.2 105 41.0
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 7.5e-13 78.2 146 35.6
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 9.8e-13 77.8 104 38.5
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 1.3e-12 77.4 137 38.7
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 1.3e-12 77.4 134 35.1
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 1.3e-12 77.4 108 40.7
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 1.7e-12 77.0 125 40.0
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 1.7e-12 77.0 125 40.0
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.8e-12 76.3 134 34.3
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.8e-12 76.3 134 35.1
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 3.7e-12 75.9 135 37.8
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 4.8e-12 75.5 110 37.3
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 4.8e-12 75.5 133 34.6
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 4.8e-12 75.5 106 38.7
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 6.3e-12 75.1 75 46.7
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 8.3e-12 74.7 105 38.1
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.1e-11 74.3 134 33.6
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 1.4e-11 73.9 106 37.7
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 1.4e-11 73.9 123 33.3
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 1.8e-11 73.6 141 33.3
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 2.4e-11 73.2 142 33.1
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 4.1e-11 72.4 97 37.1
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 5.4e-11 72.0 114 40.4
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 9.1e-11 71.2 124 36.3
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 9.1e-11 71.2 112 34.8
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 1.2e-10 70.9 89 38.2
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 1.2e-10 70.9 106 38.7
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.6e-10 70.5 143 32.9
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 1.6e-10 70.5 108 35.2
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 2.7e-10 69.7 123 30.1
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 2.7e-10 69.7 119 37.0
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 3.5e-10 69.3 161 32.9
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 3.5e-10 69.3 150 31.3
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 4.5e-10 68.9 102 40.2
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 5.9e-10 68.6 104 35.6
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 7.7e-10 68.2 100 39.0
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 1.0e-09 67.8 105 37.1
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 1.0e-09 67.8 161 32.3
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 1.0e-09 67.8 71 46.5
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 1.7e-09 67.0 95 32.6
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 2.9e-09 66.2 104 41.3
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 8.6e-09 64.7 152 30.9
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 1.5e-08 63.9 62 45.2
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 5.5e-08 62.0 72 34.7
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 9.5e-08 61.2 99 33.3
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 2.8e-07 59.7 103 34.0
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 4.7e-07 58.9 65 43.1
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 6.8e-06 55.1 87 37.9


User provided reference genes

Program Settings