Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G270 Amborella trichopoda HOM05D011842 ORTHO05D011366 3.5e-269 931.0 464 100.0
ATR0605G307 Amborella trichopoda HOM05D011842 ORTHO05D011366 3.6e-32 143.7 333 35.7
ATR1136G141 Amborella trichopoda HOM05D011842 ORTHO05D011366 1.1e-23 115.5 365 27.7
ATR1136G071 Amborella trichopoda HOM05D011842 ORTHO05D011366 2.0e-22 111.3 327 31.5
ATR0605G338 Amborella trichopoda HOM05D055651 ORTHO05D011366 1.7e-21 108.2 327 29.1
ATR0730G093 Amborella trichopoda HOM05D035754 ORTHO05D031090 6.4e-21 106.3 182 36.8
ATR1136G082 Amborella trichopoda HOM05D011842 ORTHO05D011366 1.6e-19 101.7 322 29.8
ATR0598G185 Amborella trichopoda HOM05D011842 ORTHO05D011366 1.0e-18 99.0 437 24.3
ATR0736G009 Amborella trichopoda HOM05D013040 ORTHO05D011366 5.1e-18 96.7 360 26.9
ATR1136G003 Amborella trichopoda HOM05D011842 ORTHO05D011366 4.3e-17 93.6 397 27.2
ATR1136G199 Amborella trichopoda HOM05D011842 ORTHO05D011366 2.6e-14 84.3 279 29.4
ATR1127G193 Amborella trichopoda HOM05D015801 ORTHO05D011070 3.4e-14 84.0 315 27.9
ATR0736G153 Amborella trichopoda HOM05D012411 ORTHO05D011070 7.6e-14 82.8 360 26.7
ATR0075G023 Amborella trichopoda HOM05D028407 ORTHO05D011070 4.9e-13 80.1 336 25.9
ATR0736G026 Amborella trichopoda HOM05D012411 ORTHO05D011070 4.2e-12 77.0 384 26.6
ATR0681G080 Amborella trichopoda HOM05D015022 ORTHO05D011070 2.1e-11 74.7 337 24.6
ATR0737G124 Amborella trichopoda HOM05D012411 ORTHO05D011070 1.8e-10 71.6 171 33.3
ATR1096G135 Amborella trichopoda HOM05D012411 ORTHO05D011070 1.8e-10 71.6 414 24.2
ATR1136G040 Amborella trichopoda HOM05D011842 ORTHO05D011366 3.0e-10 70.9 233 27.5
ATR0763G080 Amborella trichopoda HOM05D013040 ORTHO05D011366 5.1e-10 70.1 224 27.7
ATR0594G199 Amborella trichopoda HOM05D015801 ORTHO05D011070 8.7e-10 69.3 319 25.4
ATR0681G009 Amborella trichopoda HOM05D015801 ORTHO05D011070 4.3e-09 67.0 315 24.4
Rhsim03G0162100 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.3e-09 67.0 208 29.3
ATR1096G074 Amborella trichopoda HOM05D012411 ORTHO05D011070 7.4e-09 66.2 112 35.7
AUR62011487 Chenopodium quinoa HOM05D000218 ORTHO05D000125 7.4e-09 66.2 330 25.5
QL08p020282 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-08 65.5 354 21.5
Nn8g41006 Nelumbo nucifera HOM05D000664 ORTHO05D000491 1.6e-08 65.1 277 25.6
ATR0057G020 Amborella trichopoda HOM05D035754 ORTHO05D031090 2.8e-08 64.3 104 37.5
FvH4_3g40031 Fragaria vesca HOM05D000007 ORTHO05D005026 2.8e-08 64.3 288 24.7
MD17G1124300 Malus domestica HOM05D000007 ORTHO05D000017 4.8e-08 63.5 339 22.4
C03p03840 Brassica napus HOM05D000664 ORTHO05D000491 6.2e-08 63.2 275 23.6
Actinidia31674 Actinidia chinensis HOM05D000664 ORTHO05D000491 8.2e-08 62.8 205 25.4
ATR0057G001 Amborella trichopoda HOM05D038135 ORTHO05D011366 1.1e-07 62.4 303 25.1
ATR1096G136 Amborella trichopoda HOM05D012411 ORTHO05D011070 1.1e-07 62.4 127 36.2
Hma1.2p1_0432F.1_g152020 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 1.1e-07 62.4 171 27.5
Rhsim03G0162000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.1e-07 62.4 272 26.1
COL.COLO4_37360 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.4e-07 62.0 211 26.1
ATR0605G101 Amborella trichopoda HOM05D011842 ORTHO05D011070 2.4e-07 61.2 217 28.1
PGSC0003DMG400029657 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.4e-07 61.2 341 22.6
HanXRQChr02g0047271 Helianthus annuus HOM05D000171 ORTHO05D009073 5.3e-07 60.1 397 23.2
COL.COLO4_12871 Corchorus olitorius HOM05D000007 ORTHO05D000017 6.9e-07 59.7 280 23.9
ATR0681G217 Amborella trichopoda HOM05D015801 ORTHO05D011070 1.2e-06 58.9 175 31.4
Phvul.010G162300 Phaseolus vulgaris HOM05D012242 ORTHO05D001155 1.2e-06 58.9 149 30.9
CANSAT56G3723 Cannabis sativa HOM05D000007 ORTHO05D000017 1.5e-06 58.5 338 23.7
Cfa007611 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.5e-06 58.5 330 24.2
ATR0794G151 Amborella trichopoda HOM05D013040 ORTHO05D011366 2.0e-06 58.2 174 28.2
AUR62016299 Chenopodium quinoa HOM05D000007 ORTHO05D000017 2.0e-06 58.2 140 30.0
HanXRQChr02g0058211 Helianthus annuus HOM05D000007 ORTHO05D000017 2.0e-06 58.2 176 24.4
Thecc.04G270100 Theobroma cacao HOM05D000007 ORTHO05D000017 2.0e-06 58.2 299 26.4
Cfa003137 Carpinus fangiana HOM05D000007 ORTHO05D000017 2.6e-06 57.8 225 27.1
Lsat_1_v5_gn_5_121721 Lactuca sativa HOM05D000007 ORTHO05D000521 2.6e-06 57.8 316 22.8
Nitab4.5_0000249g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.6e-06 57.8 186 28.0
ATR0598G069 Amborella trichopoda HOM05D011842 ORTHO05D011366 3.4e-06 57.4 173 27.7
BcaB01g05705 Brassica carinata HOM05D000664 ORTHO05D000491 3.4e-06 57.4 270 21.9
THA.LOC104801597 Tarenaya hassleriana HOM05D000664 ORTHO05D000491 3.4e-06 57.4 288 24.3
Medtr3g011100 Medicago truncatula HOM05D000007 ORTHO05D000017 4.5e-06 57.0 255 24.3
Potri.008G006800 Populus trichocarpa HOM05D000007 ORTHO05D000039 4.5e-06 57.0 175 25.7
Sed0002650 Sechium edule HOM05D000664 ORTHO05D000491 4.5e-06 57.0 236 24.2
BolC3t12919H Brassica oleracea HOM05D000664 ORTHO05D000491 5.8e-06 56.6 276 22.8
COL.COLO4_37365 Corchorus olitorius HOM05D000664 ORTHO05D000491 5.8e-06 56.6 278 23.7
Hma1.2p1_1292F.1_g273710 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 5.8e-06 56.6 327 23.5
Carub.0001s2255 Capsella rubella HOM05D000171 ORTHO05D000101 7.6e-06 56.2 320 24.7
Potri.001G224200 Populus trichocarpa HOM05D000007 ORTHO05D000521 7.6e-06 56.2 331 23.9
SalBow1G3631 Salvia bowleyana HOM05D000007 ORTHO05D000017 7.6e-06 56.2 275 22.5
C08p47070 Brassica napus HOM05D001738 ORTHO05D001644 1.0e-05 55.8 341 24.3
Migut.N00353 Erythranthe guttata HOM05D000007 ORTHO05D005385 1.0e-05 55.8 322 24.2
QL04p019471 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-05 55.8 364 23.1
Thecc.07G052300 Theobroma cacao HOM05D008227 ORTHO05D010399 1.0e-05 55.8 325 24.0


User provided reference genes

Program Settings