Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 4.4e-253 877.5 448 100.0
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 1.3e-180 636.7 419 75.4
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 2.3e-180 636.0 429 74.1
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 2.9e-180 635.6 419 75.4
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 1.1e-179 633.6 444 70.7
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 2.8e-178 629.0 439 72.7
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 8.0e-178 627.5 421 74.1
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 2.3e-177 625.9 454 69.2
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 4.0e-177 625.2 418 75.1
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 1.5e-176 623.2 446 69.7
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 2.0e-176 622.9 444 69.6
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 2.0e-176 622.9 408 74.3
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 5.7e-176 621.3 439 71.1
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 9.8e-176 620.5 418 72.0
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 3.7e-175 618.6 419 72.1
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 6.3e-175 617.8 436 70.9
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 1.1e-174 617.1 418 71.5
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 1.4e-174 616.7 420 72.1
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 1.4e-174 616.7 457 68.3
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 1.8e-174 616.3 444 70.7
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 1.8e-174 616.3 433 70.7
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 4.1e-174 615.1 409 73.1
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 5.4e-174 614.8 408 73.8
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 5.4e-174 614.8 419 74.0
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 5.4e-174 614.8 444 69.6
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 1.6e-173 613.2 408 73.3
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 5.9e-173 611.3 433 70.2
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 7.8e-173 610.9 444 69.6
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 2.3e-172 609.4 445 68.3
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 3.3e-171 605.5 422 71.8
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 3.3e-171 605.5 421 72.4
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 4.3e-171 605.1 458 69.2
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 4.7e-170 601.7 445 67.2
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 1.4e-169 600.1 403 75.2
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 3.1e-169 599.0 443 68.4
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 8.9e-169 597.4 405 71.9
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 5.8e-168 594.7 421 68.9
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 9.8e-168 594.0 433 66.3
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 1.1e-166 590.5 441 66.9
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 7.0e-166 587.8 415 69.2
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 3.5e-165 585.5 415 68.4
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 7.8e-165 584.3 441 65.8
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 2.3e-164 582.8 441 66.4
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 2.3e-164 582.8 421 68.6
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 2.3e-164 582.8 421 68.6
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 6.6e-164 581.3 388 72.9
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 6.6e-164 581.3 386 72.8
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 3.3e-163 578.9 434 68.7
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 3.6e-162 575.5 417 67.9
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 1.8e-161 573.2 441 65.5
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 3.1e-161 572.4 425 67.8
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 3.2e-158 562.4 433 64.7
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 5.4e-158 561.6 518 57.5
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 7.0e-158 561.2 457 63.2
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 6.6e-156 554.7 407 67.6
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 3.1e-153 545.8 386 68.1
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 3.7e-151 538.9 388 69.3
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 5.4e-150 535.0 656 47.7
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 1.5e-147 526.9 435 59.5
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 3.3e-147 525.8 436 63.3
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 2.1e-146 523.1 368 69.6
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 3.1e-145 519.2 412 65.0
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 3.1e-145 519.2 412 65.0
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 1.2e-141 507.3 420 61.9
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 1.0e-140 504.2 457 58.4
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 1.7e-140 503.4 435 61.6
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 2.3e-140 503.1 420 61.4
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 6.6e-140 501.5 445 60.0
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 1.5e-139 500.4 431 57.8
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 2.5e-139 499.6 554 50.9
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 2.8e-138 496.1 416 63.0
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 3.4e-136 489.2 345 69.0
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 5.8e-136 488.4 423 56.7
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 3.8e-135 485.7 406 61.1
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 1.7e-132 476.9 369 66.1
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 2.3e-132 476.5 414 57.2
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 3.9e-132 475.7 357 68.6
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 3.6e-130 469.2 338 68.9
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 4.2e-126 455.7 333 67.6
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 3.7e-122 442.6 320 67.5
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 2.7e-117 426.4 426 54.5
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 6.0e-117 425.2 446 52.9
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 6.3e-106 388.7 297 66.7
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 4.5e-104 382.5 276 68.8
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 2.2e-103 380.2 322 60.6
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 4.2e-102 375.9 439 47.4
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 3.6e-101 372.9 297 66.3
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 2.5e-99 366.7 293 63.8
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 7.0e-89 332.0 259 64.9
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 1.5e-88 330.9 424 42.7
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 8.5e-87 325.1 301 59.5
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 8.0e-77 292.0 456 39.5
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 5.2e-76 289.3 315 50.8
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 9.1e-73 278.5 205 66.3
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 3.2e-70 270.0 232 62.1
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 3.6e-69 266.5 199 66.8
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 2.3e-63 247.3 170 73.5
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 1.1e-49 201.8 167 59.9
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 1.6e-48 198.0 162 64.8
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.7e-47 194.5 418 30.9
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 9.5e-46 188.7 120 75.8
HPP92_028078 Vanilla planifolia HOM05D007061 ORTHO05D009017 1.7e-42 177.9 113 77.0
arahy.Tifrunner.gnm1.ann1.4L0SCR Arachis hypogaea HOM05D007061 ORTHO05D009017 1.1e-38 165.2 104 75.0
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 6.2e-37 159.5 101 77.2
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 2.9e-34 150.6 86 83.7
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 2.9e-34 150.6 86 83.7
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 2.3e-31 141.0 111 63.1
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 1.9e-30 137.9 103 67.0
AUR62041050 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.1e-14 85.5 62 61.3
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 5.3e-12 76.6 45 75.6
Manes.04G057176 Manihot esculenta HOM05D007061 ORTHO05D005365 5.8e-11 73.2 46 78.3
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 9.9e-11 72.4 208 25.5
Lsat_1_v5_gn_0_28960 Lactuca sativa HOM05D004968 ORTHO05D005922 5.4e-09 66.6 47 74.5
MD05G1238100 Malus domestica HOM05D007061 ORTHO05D009017 1.6e-08 65.1 47 72.3
ECA234G1492 Erigeron canadensis HOM05D004621 ORTHO05D005817 8.7e-07 59.3 148 31.8


User provided reference genes

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