Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 9.7e-61 236.5 109 100.0
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 1.0e-30 136.7 112 58.9
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 7.7e-26 120.6 113 54.9
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 1.3e-25 119.8 111 55.0
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 1.7e-25 119.4 109 57.8
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 3.8e-25 118.2 113 54.0
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.8e-25 118.2 113 54.0
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 5.0e-25 117.9 113 54.0
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 5.0e-25 117.9 122 51.6
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 8.6e-25 117.1 107 54.2
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 8.6e-25 117.1 109 56.0
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.1e-24 116.7 122 50.8
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 2.5e-24 115.5 101 55.4
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 2.5e-24 115.5 107 57.0
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 4.2e-24 114.8 136 42.6
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 4.2e-24 114.8 113 52.2
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 5.5e-24 114.4 106 53.8
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 7.2e-24 114.0 105 57.1
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 9.5e-24 113.6 110 54.5
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 9.5e-24 113.6 116 50.9
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 9.5e-24 113.6 106 54.7
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.1e-23 112.5 116 50.9
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 2.1e-23 112.5 111 55.9
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 2.1e-23 112.5 102 53.9
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 2.8e-23 112.1 113 50.4
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 6.1e-23 110.9 113 51.3
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 6.1e-23 110.9 97 57.7
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 8.0e-23 110.5 108 52.8
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 1.0e-22 110.2 119 47.1
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.0e-22 110.2 104 54.8
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 1.0e-22 110.2 104 54.8
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 1.0e-22 110.2 104 54.8
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.0e-22 110.2 116 50.0
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.8e-22 109.4 107 53.3
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 1.8e-22 109.4 112 48.2
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 2.3e-22 109.0 103 52.4
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 2.3e-22 109.0 103 53.4
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 4.0e-22 108.2 107 51.4
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 4.0e-22 108.2 112 51.8
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.2e-22 107.8 116 48.3
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 5.2e-22 107.8 116 47.4
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 6.8e-22 107.5 109 52.3
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 6.8e-22 107.5 111 45.9
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.5e-21 106.3 112 51.8
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 2.0e-21 105.9 112 49.1
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 2.6e-21 105.5 119 48.7
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 3.4e-21 105.1 112 47.3
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 4.4e-21 104.8 100 53.0
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 4.4e-21 104.8 99 52.5
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 7.5e-21 104.0 120 46.7
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 7.5e-21 104.0 118 47.5
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 1.3e-20 103.2 99 53.5
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 1.7e-20 102.8 107 49.5
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 2.2e-20 102.4 99 52.5
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.2e-20 102.4 115 47.0
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 2.8e-20 102.1 119 46.2
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.8e-20 102.1 118 48.3
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.8e-20 102.1 118 48.3
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 4.9e-20 101.3 110 50.0
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 4.9e-20 101.3 102 51.0
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 1.1e-19 100.1 121 45.5
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 3.1e-19 98.6 103 48.5
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 3.1e-19 98.6 107 53.3
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 4.1e-19 98.2 120 42.5
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 1.2e-18 96.7 119 44.5
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 4.5e-18 94.7 106 47.2
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.0e-17 93.6 88 56.8
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 2.3e-17 92.4 86 57.0
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 3.8e-17 91.7 87 56.3
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.9e-16 89.4 80 57.5
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 1.9e-16 89.4 115 41.7
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 8.0e-15 84.0 127 41.7
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.0e-14 83.6 89 53.9
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 4.0e-14 81.6 93 49.5
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 2.6e-13 79.0 92 48.9
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 4.1e-11 71.6 85 50.6
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.3e-09 66.6 61 52.5
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 2.5e-08 62.4 75 44.0


User provided reference genes

Program Settings