Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G177 Amborella trichopoda HOM05D013967 ORTHO05D010247 8.6e-38 160.2 106 100.0
MBI14_g17546_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 2.9e-17 92.0 61 67.2
MBI18_g46064_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D010247 2.9e-17 92.0 61 67.2
Gohir.A07G117800 Gossypium hirsutum HOM05D000054 ORTHO05D000286 6.4e-17 90.9 63 65.1
Thecc.06G134600 Theobroma cacao HOM05D000054 ORTHO05D000286 4.1e-16 88.2 61 68.9
Thecc.06G134900 Theobroma cacao HOM05D000054 ORTHO05D000286 1.2e-15 86.7 62 66.1
ATR0763G021 Amborella trichopoda HOM05D000054 ORTHO05D000286 1.6e-15 86.3 76 60.5
GSVIVG01029728001 Vitis vinifera HOM05D013967 ORTHO05D010247 2.1e-15 85.9 57 68.4
CSS0039618 Camellia sinensis var. sinensis HOM05D026604 ORTHO05D010247 3.5e-15 85.1 60 65.0
CSS0045054 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D010247 1.1e-13 80.1 77 50.6
SEGI_09417 Sequoiadendron giganteum HOM05D013967 ORTHO05D010247 2.5e-13 79.0 65 56.9
SalBow7G2553 Salvia bowleyana HOM05D000054 ORTHO05D000171 9.5e-13 77.0 62 54.8
CAN.G943.46 Capsicum annuum HOM05D000054 ORTHO05D000286 3.6e-12 75.1 60 58.3
Gorai.001G131900 Gossypium raimondii HOM05D000054 ORTHO05D000286 3.6e-12 75.1 44 72.7
Solyc07g066550.4 Solanum lycopersicum HOM05D000054 ORTHO05D000286 8.1e-12 73.9 53 66.0
Sopen07g034710 Solanum pennellii HOM05D000054 ORTHO05D000171 8.1e-12 73.9 53 66.0
CAN.G943.47 Capsicum annuum HOM05D000054 ORTHO05D000286 1.4e-11 73.2 60 56.7
Gohir.A10G048300 Gossypium hirsutum HOM05D000054 ORTHO05D000286 4.0e-11 71.6 50 70.0
C09p25650 Brassica napus HOM05D000054 ORTHO05D000286 5.2e-11 71.2 58 51.7
TAR626G0314 Trochodendron aralioides HOM05D000054 ORTHO05D000286 5.2e-11 71.2 60 61.7
Gorai.011G052400 Gossypium raimondii HOM05D000054 ORTHO05D000286 1.5e-10 69.7 50 68.0
Rhsim06G0236400 Rhododendron simsii HOM05D000054 ORTHO05D000286 1.5e-10 69.7 52 67.3
Aqoxy1G01465 Aquilegia oxysepala HOM05D000054 ORTHO05D000286 3.4e-10 68.6 49 65.3
Gorai.N011200 Gossypium raimondii HOM05D000054 ORTHO05D000286 3.4e-10 68.6 50 68.0
SEGI_03448 Sequoiadendron giganteum HOM05D026604 ORTHO05D010247 3.4e-10 68.6 58 51.7
Duzib160G0729 Durio zibethinus HOM05D000054 ORTHO05D000286 4.4e-10 68.2 50 66.0
AUR62016382 Chenopodium quinoa HOM05D000054 ORTHO05D000171 5.8e-10 67.8 57 52.6
Duzib235G0871 Durio zibethinus HOM05D000054 ORTHO05D000286 5.8e-10 67.8 49 67.3
Gohir.D10G049000 Gossypium hirsutum HOM05D000054 ORTHO05D000286 5.8e-10 67.8 50 66.0
Duzib235G0078 Durio zibethinus HOM05D000054 ORTHO05D000286 1.3e-09 66.6 49 67.3
Gorai.011G052100 Gossypium raimondii HOM05D000054 ORTHO05D000286 1.3e-09 66.6 50 64.0
Duzib160G0570 Durio zibethinus HOM05D000054 ORTHO05D000286 2.2e-09 65.9 50 66.0
Gorai.011G052000 Gossypium raimondii HOM05D000054 ORTHO05D000286 2.2e-09 65.9 50 62.0
Rhsim06G0240900 Rhododendron simsii HOM05D000054 ORTHO05D000286 2.2e-09 65.9 49 67.3
COL.COLO4_30915 Corchorus olitorius HOM05D000054 ORTHO05D000286 2.9e-09 65.5 45 64.4
Gohir.A10G048100 Gossypium hirsutum HOM05D000054 ORTHO05D000286 2.9e-09 65.5 50 62.0
Sed0026424 Sechium edule HOM05D000054 ORTHO05D000171 2.9e-09 65.5 67 47.8
Gohir.A10G047633 Gossypium hirsutum HOM05D000054 ORTHO05D000286 3.8e-09 65.1 50 60.0
Thecc.06G134500 Theobroma cacao HOM05D000054 ORTHO05D000286 3.8e-09 65.1 49 67.3
BraA09t37635Z Brassica rapa HOM05D013967 ORTHO05D010247 6.4e-09 64.3 48 54.2
Ca_14421_v3 Cicer arietinum L. HOM05D013967 ORTHO05D010247 1.4e-08 63.2 64 46.9
Ca_30389_v3 Cicer arietinum L. HOM05D013967 ORTHO05D010247 1.4e-08 63.2 64 46.9
MBI18_g22098_MAGBIO Magnolia biondii HOM05D013967 ORTHO05D010247 1.4e-08 63.2 60 53.3
MBI18_g31328_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D010247 1.4e-08 63.2 60 53.3
DCAR_019924 Daucus carota HOM05D000054 ORTHO05D000171 3.2e-08 62.0 100 55.0
HanXRQChr08g0224851 Helianthus annuus HOM05D003486 ORTHO05D010247 7.1e-08 60.8 60 46.7
Nitab4.5_0002633g0050 Nicotiana tabacum HOM05D000054 ORTHO05D000286 9.2e-08 60.5 36 66.7
GSVIVG01021277001 Vitis vinifera HOM05D030223 ORTHO05D010247 1.6e-07 59.7 56 48.2
DCAR_019923 Daucus carota HOM05D000054 ORTHO05D000286 2.1e-07 59.3 32 75.0
Eucgr.B01468 Eucalyptus grandis HOM05D000054 ORTHO05D000286 2.7e-07 58.9 32 75.0
HanXRQChr11g0335741 Helianthus annuus HOM05D000054 ORTHO05D000286 2.7e-07 58.9 57 47.4
HanXRQChr11g0335791 Helianthus annuus HOM05D000054 ORTHO05D000171 2.7e-07 58.9 57 47.4
Hma1.2p1_0151F.1_g067490 Hydrangea macrophylla HOM05D000054 ORTHO05D010039 2.7e-07 58.9 36 66.7
Oeu051996.1 Olea europaea HOM05D000054 ORTHO05D000286 3.5e-07 58.5 38 63.2
BolC2t10423H Brassica oleracea HOM05D000054 ORTHO05D010247 7.8e-07 57.4 63 41.3
Os04g0616500 Oryza sativa ssp. japonica HOM05D000054 ORTHO05D000286 1.0e-06 57.0 47 55.3
Oeu051993.2 Olea europaea HOM05D000054 ORTHO05D000286 1.3e-06 56.6 38 60.5
Eucgr.K01777 Eucalyptus grandis HOM05D000054 ORTHO05D000171 1.7e-06 56.2 50 54.0
Gorai.007G330000 Gossypium raimondii HOM05D000054 ORTHO05D000127 1.7e-06 56.2 66 42.4
Os04g0616400 Oryza sativa ssp. japonica HOM05D000054 ORTHO05D000286 2.3e-06 55.8 47 53.2
RcHm_v2.0_Chr5g0029821 Rosa chinensis HOM05D030223 ORTHO05D010247 2.3e-06 55.8 47 48.9
Sabra11G0060300 Salix brachista HOM05D000054 ORTHO05D010247 3.0e-06 55.5 50 50.0
Os04g0616700 Oryza sativa ssp. japonica HOM05D000054 ORTHO05D000171 3.9e-06 55.1 47 51.1
Glyma.08G120302 Glycine max HOM05D000054 ORTHO05D000171 6.6e-06 54.3 56 42.9
Lsat_1_v5_gn_7_111801 Lactuca sativa HOM05D000054 ORTHO05D000286 6.6e-06 54.3 40 65.0
Rhsim06G0236300 Rhododendron simsii HOM05D000054 ORTHO05D000286 6.6e-06 54.3 35 62.9
Solyc01g108850.2 Solanum lycopersicum HOM05D000517 ORTHO05D000751 8.6e-06 53.9 61 47.5


User provided reference genes

Program Settings