Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 1.0e-125 453.4 218 100.0
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 2.7e-54 216.1 202 53.5
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 4.6e-54 215.3 201 53.2
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 6.0e-54 214.9 208 54.3
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 3.0e-53 212.6 205 55.6
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 6.7e-53 211.5 205 50.7
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 8.7e-53 211.1 196 53.1
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 1.1e-52 210.7 197 51.8
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.3e-52 209.1 196 52.6
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 5.6e-52 208.4 197 48.2
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 1.3e-51 207.2 198 48.0
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.3e-51 207.2 200 52.5
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 2.1e-51 206.5 207 52.2
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 2.8e-51 206.1 194 54.1
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 6.2e-51 204.9 194 50.5
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 1.4e-50 203.8 194 53.1
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 3.1e-50 202.6 199 50.3
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 4.0e-50 202.2 199 49.7
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 5.3e-50 201.8 197 47.2
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 5.3e-50 201.8 199 51.8
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 9.0e-50 201.1 197 49.2
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 1.2e-49 200.7 202 50.0
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 2.6e-49 199.5 192 53.1
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 3.4e-49 199.1 190 51.6
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 4.5e-49 198.7 196 52.6
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 4.5e-49 198.7 190 50.5
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 5.8e-49 198.4 196 53.6
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 5.8e-49 198.4 194 49.5
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 7.6e-49 198.0 198 47.5
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 7.6e-49 198.0 198 47.5
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 7.6e-49 198.0 196 51.0
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 1.0e-48 197.6 197 51.8
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 3.8e-48 195.7 198 51.0
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 4.9e-48 195.3 198 50.5
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 4.9e-48 195.3 198 47.0
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 8.4e-48 194.5 183 55.7
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 1.1e-47 194.1 198 50.0
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 1.9e-47 193.4 198 47.5
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 3.2e-47 192.6 199 49.2
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 5.5e-47 191.8 194 49.5
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 7.1e-47 191.4 179 54.2
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 7.1e-47 191.4 181 52.5
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 1.2e-46 190.7 198 49.5
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 1.6e-46 190.3 194 50.5
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.6e-46 190.3 201 50.2
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 2.7e-46 189.5 197 47.2
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 2.7e-46 189.5 197 46.7
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 3.5e-46 189.1 193 50.8
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 4.6e-46 188.7 181 52.5
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 6.0e-46 188.3 194 51.5
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 1.8e-45 186.8 193 49.2
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 1.8e-45 186.8 190 44.7
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.3e-45 186.4 198 49.0
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 2.3e-45 186.4 197 49.2
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 3.0e-45 186.0 206 50.0
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 5.1e-45 185.3 197 47.2
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 5.1e-45 185.3 196 50.5
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 6.7e-45 184.9 192 47.9
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 8.7e-45 184.5 197 47.2
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 7.4e-44 181.4 190 48.9
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 7.4e-44 181.4 195 49.2
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 1.3e-43 180.6 210 47.6
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 1.6e-43 180.3 190 47.9
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 3.7e-43 179.1 189 49.7
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 6.3e-43 178.3 181 48.1
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 1.1e-42 177.6 212 42.0
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.4e-42 177.2 198 46.5
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 2.4e-42 176.4 169 53.8
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.1e-42 176.0 198 48.5
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 3.1e-42 176.0 193 46.1
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 1.2e-41 174.1 179 49.2
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 8.5e-40 167.9 173 47.4
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 1.1e-39 167.5 225 41.8
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 2.5e-39 166.4 178 47.8
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 1.2e-33 147.5 266 33.1
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 2.0e-33 146.7 268 32.1
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 2.2e-32 143.3 191 43.5
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 4.4e-28 129.0 216 35.6
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.4e-25 119.4 186 39.8
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 8.5e-24 114.8 198 33.8
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.2e-23 112.8 201 35.3
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.2e-22 110.9 190 37.4
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 6.1e-22 108.6 195 36.4
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 1.0e-21 107.8 93 55.9
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.4e-20 101.7 199 36.2
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.7e-19 99.4 139 40.3
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.3e-18 95.5 193 33.7
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.0e-16 91.3 197 31.5
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.0e-16 91.3 180 32.8
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.7e-16 90.5 204 31.4
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.2e-16 90.1 186 32.8
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.5e-15 85.5 189 29.1
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.2e-15 85.1 189 29.1
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 1.2e-14 84.3 83 48.2
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 1.8e-13 80.5 87 49.4
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.2e-13 79.0 87 49.4
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.0e-08 64.7 79 45.6
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 3.8e-08 62.8 128 32.0
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 8.5e-08 61.6 129 33.3


User provided reference genes

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